| Entry |
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| Symbol |
SHOC1
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| Name |
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X2
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| KO |
| K28108 | shortage in chiasmata 1 |
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| Organism |
cjc Callithrix jacchus (white-tufted-ear marmoset)
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| Brite |
KEGG Orthology (KO) [BR:cjc00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:cjc03036]
100385639 (SHOC1)
Chromosome and associated proteins [BR:cjc03036]
Eukaryotic type
Meiosis-specific proteins
Others
100385639 (SHOC1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:complement(157074211..157180452)
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| AA seq |
1509 aa
MFSAFKYHAIDYLYENVVRKKFCRDALLLRIPSCLYQDESYHIAVTDNKFRRPWTRVSAV
SVLGMTDTSVLDQWKASLFVDDFLEKKTITRMVTQINCEFDEVVPSSNPDSQIEVEEASL
YTHMDYNDVFTPVSCLEKCSALQKQNKDLFIDDEEILFVNNRNHLPTLHTLLSRLKLFLV
KDPLLDFKGQIFTAANFFRGCFSLQEDLEVLGKEDICMDKENFCQEKLEDTIRSNKPSRF
LIEYDFLIPPSHKQEIDIPSHSELKESLNLVPEIITYVDEIEKLFKRDLTNKHGIEDIGD
IKFSSAEILAIQSQSEPEKCSKPGELELPLTPLDLSWQHSSVNSLCAELQTFPLSPVCKI
NLLTAEESANKYYMMWQLESCRSPLNSFLLTVPRIQEPYSQYSVTDLKKILSVKEESLII
NPVNTEWWKQAGLNLKMMQTLEHLNTDLCLDDLSSNDNKMELFLPSKVFQLEACLEHKSH
SSPIALIDEKSTNDHLSLPQKSLPLAKEVLDLCFSDERFSDKRPAKEEKPTNDQEPVNRI
IQKKENEDHFELDCIGPSIKSSSYSISKKASFFEHGKKQENDLDLLNDFIMLRNKYKTCT
SKTEVTNSDEKHDKEECSLTFQEESPIIHINKTLEEINQERGTDNVIEIQASDSQCQAFC
LLEAAASPILKNLISFCTLPTANWKFATVIFDQTRFLLKEQEKVVSDAVYQGTNDEREMT
FKHAALLHLLVTIRDVLLTCSLDTALGYLSKAKDTYKSILGPYLGDIWRQLQIVQFIRGK
KPETNYKIQELQCQIQSWMQCQQQVKVLIIIRMDSDGEKHLLIKILNKIEGLTLTVLHSN
ERKDFLESEGVLKGTSSCVVVHNQYIGADFPWSNFSFVVEYNYVEDSCWTKHCKELNIPY
TAFKVILPDTVLERSTLLDRFGGFLVEIQIPYVFFASEGLLNTPDILQLLESNYNITLVE
RGCSESLKLFGSSERYIVVTIDEHTAIVLQDMEELNCEKASDNIIMRLMALSFQYRYCWI
ILYTKETLNSEYQLTEKTLHHLALIYAALVSFRLNSEELDVKLIIAPGVEATALIIRQIA
DHNLMTSKTDPHEWLDKSWLEVSPSEEEMYLLDFPCINPLVAQLMLNKAPSLHWILLATL
CQLQELLPEVPEKVLKHFCSITSLFKISSSSITKSPQISSPQENRNQISAFSSQSSTSDL
DSVIQEHNECYQYLGLGETLQEDTTTTSNYNSSIMELREMAGFLPPVTSYNQTSYWKDSS
CNPDNVQNTPSLINTESRRLAYNSFLNHRESESDVFSLGLTQMNCETIKSPIDTQKRVSV
VPSFINSQKRRTHEANGFVNKEGADPIFLLEGSQSPLHWNFKKNIWEQENHSFNLQYGTE
QTTCNKLFSQKGNLFTDQQKCQSNEFEGLTCENSNDETFWKELPSVPSLDLFCASDSNAN
QKEFDSLYFYQRYGKSLGEKRHSESSFNSGDKESLTGFMYSQRPQFKKRRLAYEKVPGRV
DGQTRLTFF |
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| NT seq |
4530 nt +upstreamnt +downstreamnt
atgttttcagcattcaaatatcatgcaatagactatttatatgagaatgtagttagaaag
aagttttgtagagatgctttattgcttcgaatcccttcatgtttatatcaagatgaaagt
taccatatagcagttaccgataataaatttaggaggccatggacaagagtctcagctgtt
tcagttctgggaatgacagatacctcagtcttggaccaatggaaagcaagtctctttgtg
gacgacttccttgagaaaaaaacaattacaagaatggtgacccagattaactgtgaattt
gacgaagttgttccaagttcaaatccagactcccaaattgaagtagaggaggccagctta
tatacccacatggactataatgatgtctttactcctgtcagctgtttagaaaaatgttca
gcacttcaaaaacagaacaaagatttatttattgatgatgaagaaatactttttgtaaat
aatagaaatcacctaccaaccttgcatactctcttgagtagactaaaactatttttggta
aaggatcctcttttagatttcaaaggacagatcttcacagcagctaattttttcagggga
tgtttttctcttcaagaagatttggaagttttggggaaagaagatatttgtatggacaaa
gagaacttttgtcaggagaaactagaagatacaatacgttcaaataagccatcacgtttt
cttattgagtatgacttcttaatacctccaagccacaaacaagaaattgatattccatca
cactcggaactgaaggagtcattaaacctagtgccagaaataataacctatgtcgatgaa
attgaaaagcttttcaaaagagatcttactaacaagcacggaattgaggatatcggggat
ataaaattcagctccgcagaaattttggccattcaaagccagagtgaaccagaaaagtgc
agtaaaccaggagagttagaattgccactaactcctctagacctatcatggcagcattct
tcagtgaattcattatgtgcagaacttcagacatttccattatctccggtttgcaaaatt
aacttgcttactgctgaagaatcagctaataaatactacatgatgtggcaattagaaagc
tgtagaagccctttgaactcatttttgcttacagtaccaagaattcaagagccctacagc
caatattcagttaccgatttgaaaaagatattatctgttaaagaagaaagccttattatt
aatcccgtaaacacagagtggtggaaacaagcaggactaaatctgaaaatgatgcaaact
ttggaacatctgaatacggatttatgtcttgatgatctatcttctaatgacaataaaatg
gagctatttttgccttcaaaagtatttcaattggaagcatgtttagaacataaaagtcat
tcttcacctattgcacttattgatgaaaaatctacaaatgatcatttatcacttccacaa
aagagtctacctctggcaaaagaagtactagatctatgtttttctgatgaacgtttctct
gataaaagaccagcaaaagaggaaaaaccaacaaatgaccaagaaccagtaaatagaata
atccaaaagaaagaaaatgaagatcactttgaacttgactgcataggaccatctattaaa
tcatcttcctattcaataagtaaaaaagcatctttttttgaacatggtaaaaaacaagag
aatgatttagaccttttgaacgattttattatgctgcgaaataaatataagacttgcacc
tcaaagactgaagtcaccaacagtgatgaaaaacatgataaagaagaatgttctttgact
tttcaagaagaaagtcctatcattcatattaataaaaccctagaggaaataaatcaggaa
aggggaacagataatgtcattgaaattcaagcatcagatagccagtgccaagcattttgc
ctccttgaagcggcagcttctcctatcttaaaaaaccttatatctttctgtactctccct
actgctaattggaaatttgccactgttatttttgaccaaacaaggtttctcttaaaggaa
caagaaaaagtagtaagtgatgctgtttaccaaggtacaaatgatgaaagagaaatgaca
ttcaagcatgctgctcttttacatcttctggtaacaattagagatgtccttttaacatgc
agcttggacacagcattgggatatttgtcaaaggcaaaagatacctacaagagcatttta
ggcccctatttgggtgacatttggagacagctgcagatcgtacagtttattagggggaaa
aagcctgaaaccaactacaagatacaagaattgcaatgtcagatacaaagttggatgcaa
tgtcaacagcaagttaaggtactgattataataagaatggactcagatggtgaaaaacat
ttactcattaaaattcttaacaaaatagaaggtttaacactgactgtccttcattcaaat
gaaaggaaagattttctggaatctgaaggtgttttaaagggtacaagttcctgtgtagtt
gtacataatcaatatattggagcagatttcccctggagtaatttctcatttgtggtagaa
tacaattatgtggaagactcttgttggactaaacactgcaaagagttgaatattccttac
acggcctttaaagtgattcttccagacacagttttagaaagaagcacattgctggataga
tttggaggttttcttgtggaaattcagattccatatgtgttttttgcatctgaaggactt
cttaatactccagacatacttcagctgctagaatccaactataatatcacactggtagag
agaggctgcagtgagtcattgaaactctttggaagttcagagcgttacatagtggtgaca
attgatgaacacactgccatagttttgcaggatatggaagaattaaattgtgagaaggca
tcagacaatattattatgaggctgatggcattatcattccagtacagatattgttggata
attttatacaccaaagaaacattaaattcagagtatcagcttacagaaaagacacttcat
cacctagcactgatttatgcagctttggtgtcatttaggctaaactctgaagaactggat
gtaaagcttataattgccccaggagtagaagcaactgccttgataattcgacagattgct
gaccacaatttaatgacctcaaagacagatcctcatgaatggttggataaatcctggctt
gaagtttcaccgtctgaggaagaaatgtacttacttgattttccatgtattaacccattg
gtggctcagctcatgctaaataaagcaccttcactgcactggatattattagcaactctg
tgtcaacttcaggaactcctacctgaagttccagaaaaagtgttaaagcatttttgtagt
atcacttccctattcaagattagttcttcttccataacaaaatcaccgcaaatttcatca
cctcaggaaaataggaatcagattagtgccttctcttctcagagttcaacttctgattta
gactccgtcattcaagaacataatgaatgttatcagtatttaggattaggagagacattg
caggaagacacaaccaccacttcgaactacaactcttccattatggaactaagagaaatg
gcaggttttttaccacctgtaacttcatacaatcagaccagctactggaaagactccagt
tgtaaccctgataatgtgcagaatactccttctctaattaatacagaatcaagaagactg
gcttataactcctttctaaaccacagagagtcagagtcagatgtcttttctttgggtcta
acacaaatgaactgtgaaactataaaatcaccaattgacactcagaagagagtgtcagtt
gtccccagttttataaactctcagaaaagaagaacacacgaagcaaacggttttgtaaat
aaagaaggagctgaccctatctttttactagagggctctcaatctcctcttcattggaac
tttaagaaaaatatatgggaacaagagaatcactcgttcaacttacaatatggtacagag
cagactacatgcaacaaattgttctctcagaaaggtaatttattcactgatcagcaaaaa
tgtcaatcaaatgagtttgaaggcctcacatgtgaaaattcaaatgatgagactttctgg
aaagaattaccatctgtccccagtttggatttattttgtgcttctgattctaatgcaaat
caaaaagaattcgacagcctttatttctaccaaagatatggaaaaagtttaggagagaaa
aggcactctgaatcttcatttaactcaggagacaaggaatctttaacaggttttatgtac
tcacaacgaccacaattcaaaaaacgacgtctagcatatgaaaaagtccctggtagagtt
gatgggcagactcggctgacgtttttttga |
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