Callithrix jacchus (white-tufted-ear marmoset): 100385762
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Entry
100385762 CDS
T03264
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03040
Spliceosome
cjc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100385762
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100385762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100385762
03041 Spliceosome [BR:
cjc03041
]
100385762
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100385762
mRNA cycle factors
Common to processing body (P body) and stress granule
100385762
Spliceosome [BR:
cjc03041
]
Common components
Common spliceosomal components
hnRNP proteins
100385762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
100385762
NCBI-ProteinID:
XP_035130478
LinkDB
All DBs
Position
15:complement(41233136..41234207)
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AA seq
345 aa
AA seq
DB search
MLIVVLSARGRRRSSIVKVSLLPAIMSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFE
QWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDS
QRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDD
HDSVDKIVIQKYHTVNGHNCEVRKALSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDN
FGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGGNFGGGGSYNDFGSYNNQSSNFGP
MKGGNFGGRSSGPYGGGGQYFAKPRNQGGYGGSSSSSSYGSGRRF
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgttaattgtggtcctttctgcccgtggacgccgccgaagcagcatcgttaaagtctct
cttctccccgcgatcatgtctaagtcagagtctcctaaagagccggaacagctgaggaag
ctcttcattggagggttgagctttgaaacaaccgatgagagcctcaggagccattttgag
caatggggaacgctcacagactgtgtggtcatgagagatccaaacaccaagcgctccagg
ggctttgggttcgtcacgtatgcaactgtggaggaggtggatgcagccatgaatgcaagg
ccacacaaagtggatggaagagttgtggaaccaaagagagctgtctcaagagaagattct
caaagaccaggtgcccacttaactgtgaaaaaaatattcgttggtggcattaaagaagac
actgaagaacatcacctaagagattattttgaacagtatggaaaaattgaagtgattgaa
atcatgacggacagaggcagtggcaagaaaaggggctttgcctttgtaacctttgacgac
catgactccgtggataagattgtcattcagaaataccatactgtgaatggccacaactgt
gaagttaggaaagccctgtcaaagcaagagatggctagtgcttcatccagccaaagaggt
cgaagtggttctggaaactttggtggtggtcgtggaggaggtttcggtgggaatgacaac
tttggtcgtggaggaaatttcagcggtcgtggtggctttggtggcagccgtggtggtggt
ggttatggtggcagtggggatggctataatggatttggcaatgatggaggcaattttgga
ggtggtggaagctacaatgattttggcagttacaacaatcagtcttcaaattttggaccc
atgaagggaggaaactttggaggcagaagctctggcccctatggtggtggcggccaatac
tttgccaaaccacgaaaccaaggtggctatggcggttccagtagcagcagtagctatggc
agtggcagaagattttaa
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