Callithrix jacchus (white-tufted-ear marmoset): 100385942
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Entry
100385942 CDS
T03264
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjc03036
]
100385942 (CHD2)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100385942 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
DEAD
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
100385942
NCBI-ProteinID:
XP_035159778
LinkDB
All DBs
Position
6:20122840..20288772
Genome browser
AA seq
1840 aa
AA seq
DB search
MAHKQREDYLNLAPCILTWYRTLSQLAFDGEKLSHSASEEASGSDSGSQSESEQGSDPGS
GHGSESNSSSESSESQSESESESAGSKSQPVLPEAKEKPASKKERIADVKKMWEEYPDVY
GVRRSNRSRQEPSRFNIKEEASSGSESGSPKRRGQRQLKKQEKWKREPSEDEQEQGTSAE
SEPEQKKVKARRPVPRRTVPKPRVKKQPKTQRGKRKKQESSDEDDDDDEAPKRQTRRRAA
KNVSYKEDDDFETDSDDLIEMTGEGVDEQQDNSETIEKVLDSRLGKKGATGASTTVYAIE
ANGDPSGDFDTEKDDGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDE
IKQWLGKVSPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAP
SNEPEYLCKWMGLPYSECSWEDEALIGKKFQNCIDGFHSRNNSKTIPTRECKALKQRPRF
VALKKQPTYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLF
HQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL
KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGT
PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEK
SLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYL
IKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL
TIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDS
DWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTG
RTILENNSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETREN
EVSTSATDELLSQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELEEI
YMLPRIRSSTKKAQTNDSDSDTESKRQAQRSSASESETEDSDDDKKPKRRGRPRSVRKDL
VEGFTDAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQE
YEEQLKENASEGKGPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYC
LTCRVKAAHFDVEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVETDKKPQG
KQLQTRADYLLKLLRKGLEKKGTVTAGEETKLKKRKPRVKKENKVPRLKEEHGVELPSPR
HSDNPSEEGEVKDDGLEKSPMKKKQKKKENKENKEKQMSSRKDKEGDKERKKSKDKKEKP
KSGDAKSSSKSKRSQGPVHITAGSEPVPIGEDEDDDLDQETFSICKERMRPVKKALKQLD
KPDKGLNVQEQLEHTRNCLLKIGDRIAECLKAYSDQEHIKLWRRNLWIFVSKFTEFDARK
LHKLYKMAHKKRSQEEEEQKKKDDMIGGKKPFRPEASGSSRDSLISQSHTSHNLHPQKPH
LPASHGPQMHGHPRDNYSHPNKRHFSNADRGDWQRERKFNYGGSNNPPWGSDRHHQYEQH
WYKDHHYGDRRHMDAHRSGSYRPNNMSRKRPYDQYSSDRDHRGHRDYYDRHHHDSKRRRS
DEFRPQNYHQQDFRRMSDHRPPMGYHGQGPSDHYRSFHTDKLGEYKQPLPPLHPAVSDPR
SPPSQKSPHDSKSPLDHRSPLERSLEQKNNPDYNWNVRKT
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atggctcacaaacaaagggaagattatttgaacttggccccgtgtattcttacttggtac
cgtacattatctcagttggcatttgatggagaaaaactcagtcactcagcctctgaagaa
gcttcgggttcagactcaggcagtcagtcggaaagtgagcagggaagtgatccaggaagt
ggacatggcagcgagtcgaatagcagttctgagtcttctgagagtcagtcggaatctgag
agtgaatcagcaggttccaaatcccagccagtcctcccagaagccaaagagaagccagcc
tctaagaaggaacggatagctgatgtgaagaagatgtgggaagaatatcctgatgtttat
ggggtcaggaggtcaaaccgaagcagacaagaaccatcacgatttaatattaaggaagag
gcaagtagcgggtctgagagtgggagcccaaaacgaagaggccagaggcagctgaaaaaa
caagaaaaatggaaacgggagccctcagaagatgaacaggagcaaggcaccagtgcagag
agtgagccagagcagaagaaagtgaaagccagaagacctgtccccagaagaacagtgccc
aaacctcgtgttaaaaagcagcctaagactcagcgtggaaagagaaaaaagcaagagtct
tctgatgaggatgatgatgatgacgaagctccaaaaaggcagactcgtcgaagagcggct
aaaaatgttagttataaagaagatgatgactttgagacggactcagatgatctcattgaa
atgactggagaaggagttgatgaacagcaggataatagtgaaactattgaaaaggtctta
gattcaagactgggaaagaaaggagccactggagcttctactaccgtgtatgcaattgaa
gctaatggagaccctagtggtgactttgacactgaaaaggatgatggtgaagtccagtac
ctcatcaagtggaagggttggtcttacatccacagcacatgggagagtgaagaatcctta
cagcaacagaaagtgaagggcctcaaaaaactagagaacttcaagaaaaaagaggatgaa
atcaaacaatggttagggaaagtttctcctgaagatgtagaatatttcaattgccaacag
gagctggcttcagagttgaataaacagtatcagatagtagaaagagtaatagctgtgaag
acaagtaaatctacattgggtcaaacagattttccagctcacagtcggaagccggcaccc
tcaaatgagcctgaatatctatgcaaatggatgggactgccctattcagagtgtagctgg
gaagatgaagccctcattggaaagaaattccagaattgcattgatggctttcacagtagg
aacaactcaaaaaccatcccaacaagagaatgcaaggccctgaagcagagaccacgattt
gtagctttaaagaaacaacctacatatttaggaggagagaatctggaacttcgagattat
cagctagaaggtctcaactggcttgctcattcctggtgcaaaaataacagtgtaatcctt
gctgatgaaatgggcctaggaaagaccatccagaccatatcattcctctcctacctgttc
caccaacaccagctgtatggcccctttcttatagtcgtccctttatccaccctcacctca
tggcagagagaatttgaaatctgggcaccagagattaacgtagtggtttacataggtgac
ctgatgagcagaaatacgatacgggaatatgaatggattcattcccaaaccaaaagattg
aagttcaatgcacttataacaacatatgagattctcttaaaagataagactgtgctgggc
agtattaactgggcctttctgggagtggatgaagcccatcggttgaagaatgatgactct
ttattgtataaaactctgattgatttcaagtccaaccataggctcctgattacggggacc
cctcttcagaattccctcaaagagctctggtccttgctgcactttattatgccggagaag
tttgaattctgggaagattttgaagaagaccatgggaaagggagagagaatggctaccag
agtcttcataaggtgctagagcctttccttctccggagagtcaaaaaagatgtggagaaa
tcccttcctgccaaagtggaacagattctcagggtggagatgtcagcccttcagaaacag
tattacaagtggattctgaccaggaattacaaggctcttgccaaaggaacaagaggcagc
acatctggttttcttaatattgtgatggaactgaaaaaatgctgcaaccactgctatctg
attaaaccccctgaagaaaatgaaagggaaaatgggcaggagattcttctgtccctcata
aggagcagtgggaagctgattttattagacaaactgttgacaagacttcgagaaaggggg
aaccgagtgcttatcttctctcagatggtgagaatgttggatatcctggctgaataccta
actattaaacactatcctttccagcgtctggatggttccatcaagggagaaatccgcaaa
caggcactggaccacttcaatgcagatgggtctgaggacttctgtttcctgctctcgaca
agggctggtggcctgggaatcaatttggcttcagcggacacagtcgtcatctttgactct
gattggaacccccagaatgacttgcaggcacaagcccgagcacatagaattggtcagaag
aagcaggtaaatatttaccgcttagttacaaaggggactgtggaggaggagatcatagaa
cgggccaaaaagaagatggtattggaccatctggtgattcagcgcatggataccactggc
cggacgatcctggaaaacaactcgggaaggtccaactcaaatccttttaataaagaagag
ctgacagctattttgaagtttggagctgaggatctcttcaaggaacttgaaggggaggaa
tcagaacctcaggaaatggatatagatgaaattttgcggttggctgaaacgagagagaat
gaagtgtcaacaagtgcaacagatgagcttttatcacagtttaaggttgccaactttgca
acaatggaagatgaagaagagctggaagagcgtcctcataaggactgggatgagatcatt
ccagaggaacagaggaaaaaggtagaggaggaagagcgacagaaggagctagaagaaatt
tatatgctgcctcgaatacggagttccactaaaaaggctcagacaaacgacagtgactct
gacactgagtctaagaggcaggcccagagatcctctgcttccgagagtgagacggaagac
tctgatgatgacaagaagccaaagcgcagagggcgtcccaggagcgtacggaaggacctt
gtggaaggattcactgatgcagagatccgaaggttcatcaaggcctataagaagtttggt
ctacctcttgaacggctggagtgcatagcacgtgacgccgagctggtagataagtcggtg
gcagatctaaaacgcctgggtgaactgattcacaacagctgtgtgtcagcaatgcaagaa
tatgaagaacagctgaaagaaaatgccagcgagggaaaaggaccagggaaaaggagaggt
ccaacaatcaagatatctggagttcaagttaatgtgaaatccattatccaacatgaagaa
gagtttgagatgctgcataaatctattcctgtggatcccgaagaaaaaaaaaaatactgc
ttaacctgtcgtgtcaaagctgcacattttgatgtagagtggggggtagaagatgattct
cgcctattgctgggaatttatgaacatggctatggaaactgggagttaattaaaacagat
ccagagcttaaattaactgacaaaattctgccagtggagacagataaaaagcctcagggg
aagcagctacagacccgagcggactacttgctgaagctgctcagaaagggtctggagaag
aaggggactgtgacagctggggaagagaccaaattaaagaagcggaagcctcgggtaaag
aaggaaaacaaagtgcccaggctgaaagaggagcatggagttgagcttccgtctcccagg
cattcagataacccatcagaagagggagaagtcaaggatgatggcttggaaaaaagtcca
atgaaaaaaaaacagaagaagaaagagaacaaggagaacaaagagaaacaaatgagttct
aggaaagacaaagaaggggacaaggaaaggaagaagtcgaaagataagaaagagaagcct
aaaagtggtgatgccaaatcttcaagtaaatcaaagcgatctcagggtcctgtccatatt
acagcaggaagtgaacctgtccccattggagaggatgaggatgatgatctggaccaggag
acattcagcatatgtaaggagaggatgaggcctgtgaaaaaggcactgaaacagctggac
aaacctgacaaggggctcaacgtgcaagaacagctggaacacacccggaactgcctactg
aaaatcggagaccgaatagccgagtgccttaaagcctactcagatcaggagcacattaaa
ctctggaggaggaacctatggatttttgtttccaagtttacagaatttgatgctcgaaaa
ctacataagttatacaagatggctcataagaaaaggtctcaagaagaggaggaacaaaag
aagaaagatgacatgatcgggggtaagaaaccgtttcgtccagaggcctcaggctccagc
cgggactctctgatatctcagtcccatacctcacataaccttcaccctcagaagcctcat
ttgcctgcctcccatggcccccagatgcatggacacccaagagataactacagtcatccc
aacaagagacacttcagtaatgcagatcgaggagactggcagagggaaagaaagttcaac
tatggtggcagcaacaatccaccctggggcagcgacaggcaccatcagtatgagcagcac
tggtacaaggaccaccattatggggaccggcgacatatggatgcccaccgttctggaagc
tatcggcccaacaacatgtccagaaagaggccttatgaccagtacagcagtgaccgagac
caccggggacacagagattattatgacaggcaccatcatgactccaagcggaggagatcc
gatgaatttaggcctcaaaattaccaccagcaggatttccgccgaatgtctgatcaccgc
ccccctatgggctaccatggccagggaccctcagaccattaccgctctttccacacagac
aaactgggggagtataaacagcccctacccccattgcaccccgcagtctcagatcctcga
tcacccccttctcagaaatctcctcacgactccaagtcacccctggatcacaggtctcct
ttggagagatcactagaacagaaaaacaacccagattataattggaatgtccggaaaaca
taa
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integrated database retrieval system
