Callithrix jacchus (white-tufted-ear marmoset): 100386194
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Entry
100386194 CDS
T03264
Symbol
SFPQ
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cjc01009
]
100386194 (SFPQ)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjc03021
]
100386194 (SFPQ)
03041 Spliceosome [BR:
cjc03041
]
100386194 (SFPQ)
Protein phosphatases and associated proteins [BR:
cjc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100386194 (SFPQ)
Transcription machinery [BR:
cjc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100386194 (SFPQ)
Spliceosome [BR:
cjc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100386194 (SFPQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
100386194
NCBI-ProteinID:
XP_017830036
UniProt:
U3F5E8
LinkDB
All DBs
Position
7:complement(68833846..68859986)
Genome browser
AA seq
708 aa
AA seq
DB search
MSRDRFRSRGGGGGGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPI
PPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQQPPPPPQDSSKPVVAQGPGPAP
GVGSAPPAASSAPPATPPTSGTQPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPP
QAGGPPPPPAAGPVPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGG
EPRGGRQHHPPYHQQHHQGPPPVGPGGRSEEKISDSEGFKANLSLLRRPGEKTYTQRCRL
FVGNLPADITEDEFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRG
RQLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTGKGIVEFA
SKPAARKAFERCSEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPR
FAQHGTFEYEYSQRWKSLDEMEKQQREQVEKNMKDAKDKLESEMEDAYHEHQANLLRQDL
MRRQEELRRMEELHNQEMQKRKEMQLRQEEERRRREEEMMIRQREMEEQMRRQREESYSR
MGYMDPRERDMRMGGGGAMNMGDPYGSGGQKFPPLGGGGGIGYEANPGVPPATMSGSMMG
SDMRTERFGQGGAGPVGGQGPRGMGPGTPAGYGRGREEYEGPNKKPRF
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggatcggttccggagtcgaggcggtggcggtggtggcttccacaggcgcgga
ggaggcggcggccgcggaggcctccacgacttccgttccccgccgcccggcatgggcctc
aatcagaaccgcggccccatgggtcctggtccgggccagagcggccccaagcctccgatc
ccgccaccgcctccacaccaacagcagcagcagccaccaccgcagcagccaccgccgcaa
caaccgccaccgcatcagccgccgccacatccacagccgcatcagcagcagcagcagccg
ccgccaccgccgcaggactcttccaagcccgtcgttgctcagggacccggccccgctccc
ggcgtaggcagcgcgccgccagccgccagctcggccccgcccgccactccgccgacctcg
gggacccagccagggtccgggccaggcccgaccccgaccccgccgcccgcggtcacctcg
gcccctcccggggcgccgccacccaccccgccaagtagcggggtccctaccacacctcct
caggctggaggcccgccgcctccgcccgcggcaggcccggtcccaggtccggggcctaag
cagggcccaggccctggcggtcccaaaggcggcaaaatgcctggcgggccaaagccaggt
ggcggcccgggcctaagcactcctggcggccacccgaagccgccgcatcgaggcggcggc
gagcctcgcgggggccgccagcaccacccgccctaccaccagcagcaccaccaggggccc
ccgcccgttgggcccggcggccgcagcgaggagaaaatctcggactcggaggggtttaaa
gccaacttgtcactcttgaggaggcctggagagaaaacttacacacagcggtgtcggttg
tttgttgggaatctacctgctgatatcacggaagatgaattcaaaagactatttgctaaa
tatggagaacctggagaagtttttatcaacaaaggcaaaggattcggatttattaagctt
gaatccagagctttggctgaaattgccaaagctgagctcgatgatacgcccatgagaggt
agacagcttcgagttcgctttgccacacatgctgctgccctttctgttcgtaatctttca
ccttacgtttccaatgaactgttggaagaagccttcagccagtttggtcctattgaaagg
gctgttgtaatagtggatgatcgtggaagatctacagggaaaggcattgttgaatttgct
tctaaaccagcagcaagaaaggcatttgaacgatgcagtgaaggtgttttcttgctgaca
acaactcctcgtccagtcatcgtggaaccacttgaacagctagatgatgaagatggtctt
cctgaaaagcttgcacagaagaatccaatgtatcaaaaagagagagaaactcctcctcgt
tttgcccagcatggcacatttgagtacgaatattctcagcgatggaagtcgttggatgaa
atggaaaaacagcaaagagaacaagttgaaaaaaatatgaaggatgcaaaagacaaattg
gaaagtgaaatggaagatgcctatcatgaacatcaggcaaatcttctgcgccaagatctg
atgagacgacaggaagaattaagacgcatggaagaacttcataatcaagaaatgcagaaa
cgtaaagaaatgcaattgaggcaagaggaggaacgacgtagaagagaggaagagatgatg
attcgtcagcgtgagatggaagaacaaatgaggcgccaaagagaggaaagttatagccga
atgggctacatggatccaagagaaagagacatgagaatgggtggcggaggagcaatgaac
atgggagatccctatggttcaggaggccagaaatttccacctctaggtggtggtggtggc
ataggttatgaagctaatcctggagttccaccagcaaccatgagtggttccatgatggga
agtgacatgcgtactgagcgctttgggcagggaggtgcggggcctgtgggtggacagggt
cctagaggaatggggcctggaactccagcaggatatggtagagggagagaagagtacgaa
ggcccaaacaaaaaaccccgattttag
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