Callithrix jacchus (white-tufted-ear marmoset): 100386222
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Entry
100386222 CDS
T03264
Symbol
MSR1
Name
(RefSeq) macrophage scavenger receptor types I and II isoform X1
KO
K06558
macrophage scavenger receptor 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100386222 (MSR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100386222 (MSR1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cjc04090
]
100386222 (MSR1)
Membrane trafficking [BR:
cjc04131
]
Endocytosis
Phagocytosis
Scavenger receptors
100386222 (MSR1)
CD molecules [BR:
cjc04090
]
Proteins
100386222 (MSR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
Macscav_rec
Collagen
SRCR_2
CENP-F_leu_zip
Peptidase_S64
DUF4349
bZIP_1
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
100386222
NCBI-ProteinID:
XP_008977488
Ensembl:
ENSCJAG00000011905
UniProt:
F6QM72
LinkDB
All DBs
Position
13:22048091..22411115
Genome browser
AA seq
451 aa
AA seq
DB search
MEQWDGFHDQQEDTNSYSESVKFDARSMTALLPPYPKNSASLQEKLKSFKAALIALYLLV
FAVLIPLIGIVAAQLLKWETKNCSVGSTNVNDITQNLMGKGNDSEEEMRFQELVMEHMSN
MERRIQHISDVEANLVESEHFQNFSLIIDQRFNDVLLQLRTLFSSVQGHENAIDEISKSL
ISLNTTLLDLQFNIEKLNGKMQESTFKQQEEISKLEGRVYNVSAEIMAMKEEQVHLEQEI
KGEVKVLNNITNDLRLKDWEHSQTLRNITLIQGPPGPPGEKGDRGPSGESGPRGFPGPIG
TPGLKGDRGAIGFPGSRGFPGHTGRPGNSGPKGQKGEKGSGNTLTPFKKVRLVGGSGPHE
GRVEIFHSGQWGTVCDDRWEVRVGQVVCRSLGYPGVQAVYKAAHFGQGTGPIWLNEVFCF
GRESSIEECKIQQWGTRVCSHSEDAGVTCTL
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtgggatggctttcatgatcaacaggaggacactaatagctactccgagtct
gtgaaatttgatgctcgctcaatgacagctttgcttcctccctatcctaaaaacagcgct
tcccttcaagagaaactgaagtccttcaaagctgcactgattgccctttacctccttgtg
tttgcagttctcattcctctcattggaatagtggccgctcaactcctaaagtgggaaacg
aagaattgctcagttggttcaactaatgtaaatgacataacacaaaatcttatgggaaaa
ggaaatgacagcgaagaggaaatgagatttcaagaactcgttatggaacacatgagcaac
atggagaggagaatccaacatatttcagatgtagaagccaacctcgtagaatcagagcat
ttccaaaatttcagcctgataattgatcaaagatttaatgacgttcttctccagctacgt
accttgttttcctcagtccagggacatgagaatgcaatagatgaaatctccaagtcctta
ataagtttgaataccacattgcttgatttgcagttcaacatagaaaagctgaatggcaaa
atgcaagagagtacctttaagcaacaagaggaaatcagtaaattagaggggcgtgtttac
aatgtatcagcagaaatcatggctatgaaagaagaacaagtgcatttggagcaggaaata
aaaggagaagtgaaagtactgaataacatcactaatgatctcagactgaaagactgggaa
cattctcagacactgagaaatatcactttaattcaaggtcctcctggacccccaggtgaa
aaaggagatcgaggtccctctggagaaagtggtccacgaggctttccaggtccaataggt
actccaggtcttaaaggtgatcggggagcaattggttttcctggaagtcgaggattccct
ggacatacaggaaggccaggaaattctggaccaaaaggccagaaaggggaaaaggggagt
ggaaacacactaactccatttaagaaagttcgactggttggtgggagcggccctcacgaa
gggagagtggagatattccacagcggccaatggggcacagtttgtgacgatcgctgggag
gtgcgagttggacaggtcgtctgtaggagtttaggatacccgggtgttcaagccgtgtac
aaggcagctcattttggacaaggtactggtccaatatggctgaatgaagtgttttgtttt
gggagagaatcatctattgaagaatgtaaaattcaacaatggggcacaagagtctgttca
cattctgaagatgctggagtcacttgcactttataa
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integrated database retrieval system
