Callithrix jacchus (white-tufted-ear marmoset): 100386255
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Entry
100386255 CDS
T03264
Symbol
NR1D2
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
100386255 (NR1D2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100386255 (NR1D2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cjc03310
]
100386255 (NR1D2)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100386255 (NR1D2)
Nuclear receptors [BR:
cjc03310
]
1. Thyroid hormone like
1D. Rev-Erb
100386255 (NR1D2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
LpxD
Motif
Other DBs
NCBI-GeneID:
100386255
NCBI-ProteinID:
XP_035133626
Ensembl:
ENSCJAG00000003844
LinkDB
All DBs
Position
17:55405963..55440992
Genome browser
AA seq
579 aa
AA seq
DB search
MEVNAGGVIAYISSSSSASSPASCHSEGSENSFQSSSSSVPSSPNSSNSDTNGNPKNGDL
SNIEGILKNDRIDCSVKTSKSSASGMTKSHSGVTKFSGMVLLCKVCGDVASGFHYGVHAC
EGCKGFFRRSIQQNIQYKKCLKNENCSIMRMNRNRCQQCRFKKCLSVGMSRDAVRFGRIP
KREKQRMLIEMQSAMKTMMNSQFSGHLQNDTLIEHHEQTALPAQEQLRPKPQLEQENIKS
SSPPSSDFAKEEVIGMVTRAHKDTFMYNQEQRENSAESMQPQRGERIPKNMEQYNLNHDH
CGSGLSSHFPCSESQQHLNGQFKGRNIMHYPNGHAICIANGHCMNFSNAYTQRVCDRVPI
DGFSQNENKNSYLCNTGGRMHLVCPMSKSPYVDPHKSGHEIWEEFSMSFTPAVKEVVEFA
KRIPGFRDLSQHDQVNLLKAGTFEVLMVRFASLFDAKERTVTFLSGKKYSVDDLHSMGAG
DLLNSMFEFSEKLNALQLSDEEMSLFTAVVLVSADRSGIENVNSVEALQETLIRALRTLI
MKNHPNEASIFTKLLLKLPDLRSLNNMHSEELLAFKVHP
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaatgcgggaggtgtgattgcctatatcagttcttccagctcagcctcaagc
cctgcctcttgtcacagtgagggttctgagaatagtttccagtcctcttcctcttctgtt
ccatcttctccaaatagctctaattctgataccaatggtaatcccaagaatggtgatctc
tccaatattgaaggcatcctgaagaatgatcgaatagattgttctgtgaaaacaagcaaa
tccagtgcatctgggatgacaaaaagtcatagtggtgtgacaaaatttagtggcatggtt
ctactgtgtaaagtctgtggggatgtggcatcaggattccactatggagttcatgcttgt
gaaggctgtaagggtttctttcggagaagtattcaacaaaacatccagtacaagaagtgc
ctgaagaatgaaaactgttctataatgagaatgaataggaacagatgccagcaatgtcgc
ttcaaaaagtgtctctctgttggaatgtcaagagatgctgttcggtttggtcgtattcct
aagcgtgaaaaacagaggatgctaattgaaatgcaaagtgcgatgaagaccatgatgaac
agccagttcagtggtcacttgcaaaatgacacattgatagaacatcatgaacagacagcc
ttaccagcgcaggaacagctgcgacccaagccccagctggagcaagaaaacatcaaaagc
tcttctcctccctcttctgattttgcaaaggaagaagtgattggcatggttaccagagct
cacaaggatacctttatgtataatcaagagcagcgagaaaactcagcagagagcatgcag
ccccagagaggagaacggattcccaagaacatggagcaatataatttaaatcatgaccat
tgtggcagtgggcttagcagccattttccctgtagtgagagccagcagcatctcaacgga
cagttcaaagggaggaacataatgcattacccaaatggacatgccatttgtattgcaaat
ggacattgtatgaacttctccaatgcttatactcaaagagtatgtgatagagttccgata
gatggattttctcagaatgagaacaagaatagttatctgtgcaacactggagggagaatg
catctggtttgtccaatgagtaagtctccatatgtggatcctcataaatcggggcatgaa
atctgggaagagttttcgatgagcttcactccagcagtgaaagaagtggtggaatttgca
aagcgtattcctggtttcagagatctctctcagcatgaccaggtcaaccttttaaaggct
gggacttttgaggttttaatggtacggtttgcatcattatttgatgcaaaggaacgcact
gtcacctttttaagtggaaagaaatacagtgtggatgatttacactcaatgggagcaggg
gatctgctaaactctatgtttgaatttagtgagaagctgaatgccctccagcttagtgat
gaagagatgagtttgtttacagctgttgtcctggtatctgcagatcgatctggaatagaa
aacgtcaactctgtggaggctttgcaggaaaccctcattcgtgcactaaggaccttaata
atgaaaaaccatccaaatgaggcctctatttttacaaaactacttctaaagttgccagat
cttcgatctttaaacaacatgcattctgaggagctcttggcctttaaagttcacccttaa
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