Callithrix jacchus (white-tufted-ear marmoset): 100386518
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Entry
100386518 CDS
T03264
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1 isoform X2
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100386518 (NPAS1)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
100386518 (NPAS1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
100386518
NCBI-ProteinID:
XP_002807896
Ensembl:
ENSCJAG00000011666
UniProt:
A0A8I3W1K4
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Position
22:39568661..39593873
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AA seq
592 aa
AA seq
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MAAPYPGGGRWKRGQMRGGRGASVPWDFLPGLMVKAPSGPCLQAQRKEKSRNAARSRRGK
ENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGPPAGLA
PGRRGPAALVSEVFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVEMTGS
SVFDYIHPGDHSEVLEQLGLRAPTPGPPTPPSVSSSSSSSSSSSLADTPEIETSLTKVPP
SSLVRERSFFVRMKSTLTKRGLHVKASGYKVIHVTGRLRAHALGLVALGHTLPPAPLAEL
PLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDATRIRQSHVDLL
DKGQVMTGYYRWLQRTGGFVWLQSVATVAGSGKSPGEHHVLWVSHVLSQAEGGQTPLDAF
QLPASMTCEDASSPGPEPTEPEPPAEGKETASLEKEAPQTQGKRIKVEPVPRETEGSEDS
GDEDPSGHPAPPRPEFTSVIRAGALKQDPVRPWGLTPPGDPPPTLLHAGFLPPVVRGLCT
PGAIRYGPAELGLVYPHLQRLGPGPALPEAFYPPLGLPYPGSAGTRLPRKGD
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccctatcccggcggtggcaggtggaagcgaggtcaaatgcggggaggccgc
ggcgccagcgtcccgtgggactttctacccgggctgatggtcaaggcgccgtccggaccg
tgcctgcaggctcagcgcaaggagaagtcccggaacgcggcgcgctcgcggcgcgggaag
gagaacctggagttcttcgagctggccaagcttctcccgctgcccggcgccatctcgagc
cagctggacaaggcttccatcgtgcgcctgagcgtcacctacctccgcctgcgccggttc
gccgcgttgggggcgccgccctgggggctgagagcagcggggccgccggccggcctcgcc
ccaggccgccgcggccccgcagcgctagtgtccgaagtcttcgagcagcacctgggagga
cacatcttacagtcgctggatggctttgtgttcgccttgaaccaggaaggaaaattcctc
tacatctcagagacagtctccatctatctgggtctctcacaggtggagatgacgggcagc
agcgtcttcgactacatccacccaggggaccactcggaggtgctggagcaactgggactg
cgggccccgacccccggccccccaaccccgccctccgtctcctcctcttcctcctcctcc
tcttcctcttcgcttgcggataccccggagatcgagaccagcctcaccaaggtgcccccc
tcctccctggtccgggagcgctccttctttgtccgcatgaaatccacgctcaccaagagg
gggctgcacgtcaaggcctcggggtacaaggtcatccacgtgactgggcgccttcgggcc
cacgccctgggccttgtggccctcgggcacacgttgcccccagctcccctggctgagctg
ccactccacggacacatgatcgtctttcgtctcagcctgggtctcaccatccttgcttgt
gagagcagagtcagcgaccacatggatctggggccctcagagctggtgggccgcagctgt
taccagttcgtccacggacaggatgccaccaggatccgccagagccatgtggacttgctg
gacaagggtcaggtgatgactggttactaccgttggctacagcgcactgggggcttcgtg
tggctgcagtctgtggccacggtggctggcagcgggaagagccccggggagcaccacgtg
ctttgggtcagccacgtgctcagccaagctgagggtggccaaactcctttggatgctttc
cagcttccagccagcatgacctgtgaggatgcatccagcccgggaccagagcccacagag
ccggagcctccagcagaagggaaggagactgcctcgctggagaaggaggccccccagacg
cagggcaaacgcatcaaagtggagcccgtcccgagggaaaccgaaggctcagaggacagt
ggtgacgaggatccctccggccacccggccccaccccggcccgagttcacctctgtcatc
cgggcgggggccctgaagcaggacccagtgcggccgtggggcctgacacctcccggggac
cccccgcccaccctcctgcatgcgggcttcctgccgcccgtggtgcggggtctgtgcaca
cccggtgccatccgctatggcccggcggagctgggcctggtgtacccgcatctgcagagg
ctgggcccaggccccgcgctcccagaggccttttacccgcccctgggcctgccctatccg
gggtctgcgggcaccaggctgccgcggaagggggactga
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