Callithrix jacchus (white-tufted-ear marmoset): 100386693
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Entry
100386693 CDS
T03264
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X2
KO
K19672
intraflagellar transport protein 140
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cjc03037
]
100386693 (IFT140)
Cilium and associated proteins [BR:
cjc03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
100386693 (IFT140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
Beta-prop_EML_2
WD40_CDC20-Fz
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_Prp19
Beta-prop_HPS5
WDR55
TPR_GEMI5
TPR_COPA_B
TPR_IFT80_172
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Clathrin
WD40_MABP1-WDR62_1st
Consortin_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-GeneID:
100386693
NCBI-ProteinID:
XP_009007142
Ensembl:
ENSCJAG00000014532
UniProt:
F7I6Q2
LinkDB
All DBs
Position
12:complement(1492628..1592277)
Genome browser
AA seq
1460 aa
AA seq
DB search
MALYFDHRIEAPDAAGSPSHISWHPVHPFLAVAYISTTSTGSVDIYLEQGECVPDTHVER
PFRVASLCWHPTRLVLAVGWETGEVTVFNKQDKEQHPVSPTHTADITVLSWSPSGNCLLS
GDRLGVLLLWKLDQRGRVQGLPLLKHEYGKHLTHCIFRLPPPGEDLVQLAKAAVSGDEKA
LDMFNWKKSSSGRLLKLGSQEGLSFFVSLMDGTVHYVDENGKTTQVVSADSAIHTLFYVE
KREALVVVTENLRLSLYMVPPEGEAKEVMKVKLSGKTGHQADITLIDGSLLVMAVGETAL
RFWDIERGENYILSPDEKFGFEKGENINCVCYCEVKGLLAAGTDRGRVAMWRKVPGLLGS
PGAEGRDRWALQTPTELQGNITQIQWGSRKNLLAVNSVISVAILSEQAMSSHFHQQVAAV
QVSPSLLNVCFLSTGAAHSLRTDMHVSGVFATKDAVAVWNGREVAIFELSGATIQSAGTF
LCETPVLAMHEESVYTVEPNRVQVRTWQGTVKQLLLFSETEGNPCFLDICGNFLVVGTDL
AHFKSFDLSRREAKAHCSCRSLAELVPGSGGITSLRCSSSGSTISILPSKADNSPSSKIC
FYDVEMDAVTIFDFKTGQIDHRETPSSHEQETNKSYLFADEGLKNYVPLNHFWDQSEPQL
FVCEAVQEVPGSQPQFADGQPHDGNASPRADVLILSFFISEEHGFLLHESFPRPSAYHSL
LGMEVPYYYFTRKPEESDREDKVESGCHHIPQMVARRPLRDFVGLEDCDKATRDAMLHFS
FFVTIGDMDEAFKSIKLIRSEAVWENMARMCVKTQRLDVAKVCLGNMSHARGARALREAE
QEPELEARVAMLAMQLGMLEDAEQLYRKCQRYDLLNKFYQASGQWQKALKVAERHDRVHL
RRTCHHYAKHLEASADYSQALSYYEKSDTHRFEVPRMLLEDLPSLELYVNKMEDKTLWRW
WAQYLESQGEMDTALHYYQLAQDHFSLVRIHCFQGNIQKAAQIANKTGNLAASYHLARQY
ESQEEVGQAVHFYTQAQAFKNAIRLCKENSLDGQLMNLALLSSPEDMIEVARYYEKATQV
DRAVMLYHKAGHLSKALELAFASQQFMALQLIAEDLDETSDPELLARCSDFFIEHSQYER
AVQLLLAARKYHEALQLCLEQNMTITEEMAEKMTVSKDSTDLPEESRRELLEQIANCCMR
QGSYHLATKKYTQAGNKLKAMRALLMSGDTEKITFFASVSRQKEIYIMAANYLQSLDWRK
EPEIMKNIISFYTKGRALDLLASFYDACAQVEIDEYQNYGKAHGALTEAYKCLSKAKAKS
ALDQETRLAQLQSRMALVKRFLQARRTYAEDPKASIKQCELLLEEPDLDSTVRIGDVYGF
LVERHVQTEEYQTAYRFLEEMRRRLPSANVSYYVSPQAVEAVHQGLGLPLMHAAPERVRH
NSMEDPREPDEEVVEEADDP
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atggccctctattttgaccaccggatagaagccccagatgcagcagggtcaccctcacac
atcagctggcaccccgtccatccgttcctggcagtcgcctacatcagcaccacctcgaca
ggcagtgtggatatttacctggagcagggggagtgcgtgccggatacacatgtcgagagg
ccgttccgggttgcttccctgtgctggcacccgacgcggctggtgctagctgtgggctgg
gagactggagaagtgacggtgtttaacaagcaggacaaggagcagcacccagtgtccccg
acacacacggctgacatcaccgtgctcagttggagccctagtgggaactgcctgctgtct
ggagacaggcttggtgtcttgctcttgtggaagctggaccaaaggggccgagtgcaaggg
ctgcccctgctgaaacacgagtatgggaaacacctcacacactgcatcttccggctcccg
cctcctggcgaggacctggttcagttggcaaaggcagctgtgagcggcgacgagaaggct
ctggacatgtttaactggaagaagagcagctctggacgcttgctgaagttggggtctcag
gaggggctgtcgttctttgtcagtctgatggatgggacggtgcactatgtggatgagaat
ggcaagaccactcaggtggtatctgcagacagcgcaatccacacactgttttacgtggag
aagagggaggcgctggtggtggtcacggagaacctccggctgtccctgtacatggtgcct
cctgagggcgaggcaaaagaagtgatgaaggtcaagctgagcgggaagaccggccaccag
gcagacatcactttgattgatggcagccttctcgtgatggccgtcggggagactgccctc
agattctgggatatagaacgaggagagaattacatactgagtccagacgagaagtttggc
tttgagaaaggagagaatataaactgtgtttgttactgcgaagtcaaaggtcttctggcc
gctggcactgacagaggacgagtagccatgtggagaaaagtaccaggcctcctgggcagc
cctggggcagagggcagggacaggtgggcccttcagacccctactgagctccaaggaaac
atcacgcaaatccagtggggctccaggaagaacctgctggcggtgaacagcgtcatctcc
gtagccatcctcagcgagcaggccatgtcatcacacttccaccagcaggtggctgccgtg
caggtctccccgagcctgctgaatgtgtgcttcctgtccacgggggcagcacacagcctg
cgcaccgacatgcacgtcagcggggtgtttgccaccaaggatgctgtcgcagtctggaac
ggaagggaggtggcgatatttgagctttccggagccacgatacagagtgcagggaccttc
ctgtgtgagacacccgtgttagccatgcatgaagaaagcgtttatacggtggagccaaac
cgagttcaagttcgaacctggcaggggactgtcaaacaactcctccttttctcggagact
gaggggaacccatgcttcttggacatctgtgggaacttcctggttgtagggacagacctg
gctcactttaaaagctttgatctttcccgaagggaggcaaaagcacactgcagctgcagg
agcctggcggaactggtccccgggtcgggcggcatcacttctctgcggtgcagcagtagc
gggagcacgatcagcatcctccccagcaaggccgacaacagccccagttccaaaatctgc
ttctacgacgttgaaatggacgcagtgacaatcttcgacttcaagactggacagattgat
cacagagagacgccgtcctctcatgagcaagagactaataagagctacctttttgcagat
gaggggctgaaaaattatgtccctctgaaccacttctgggaccagagcgaaccccagctg
tttgtctgcgaagccgtgcaggaggtgccgggctcccagccacagtttgcagacgggcaa
ccgcacgacgggaacgccagccccagggcagatgttttgattctgtccttcttcatttct
gaagagcacggcttcctgcttcatgagagcttcccgcggccttccgcctaccacagtctt
ctggggatggaagtgccctactactacttcacaagaaagcctgaagaatcggacagagaa
gacaaggtagagtctgggtgccaccacattcctcagatggtcgccaggagacccctgcga
gacttcgtggggctggaggactgtgacaaggccacacgggacgccatgctccacttcagc
ttcttcgtcaccattggagacatggatgaagccttcaaatccatcaaactcatcagaagc
gaggccgtctgggagaacatggcgcgcatgtgcgtgaagactcagcggctggacgtggcc
aaggtgtgcctggggaacatgagccacgcccgtggggccagagcactgcgcgaggcagag
caggagccagagctggaggcccgcgtggccatgttggccatgcagctaggcatgctggag
gacgccgagcagctgtacaggaagtgccagcgctatgacctcctgaacaagttctaccag
gcctcgggccagtggcagaaagccctcaaggtagctgagcgccatgaccgcgtgcacctg
cgccgaacctgccaccactacgccaagcacctggaggccagcgccgactacagccaggcc
ctcagctactacgagaagtcggacacgcaccgcttcgaggtgcccaggatgctgttggag
gacctgccgtccctggagctctatgtgaataagatggaggataagaccctgtggcggtgg
tgggcacagtacctggagagccagggtgagatggacaccgcgctgcactactaccagctg
gcccaggaccacttctccctggtccgcatccactgcttccagggcaacatccagaaggct
gcgcagatagccaacaagacgggaaacctggcggcctcctaccacctcgcccgccagtat
gagagccaggaggaggtggggcaggcagtgcacttctacacccaggcgcaggccttcaag
aacgccatccgcctgtgcaaggagaacagcctggacggccagctcatgaacttggccctg
ctcagctccccagaggacatgatcgaggtggctcgatactatgagaaggccacgcaggtg
gacagggcggtcatgctgtaccacaaggctggccacctctccaaggccctggagctggcc
ttcgccagccagcagttcatggccctgcagctcatagcggaggacctggacgagacgtca
gaccccgagcttctggcccgctgctccgacttcttcatcgagcacagtcagtacgagagg
gcggtgcagctgctgctggctgccaggaagtatcatgaagccctgcagctgtgcctggag
cagaacatgactatcaccgaggagatggctgaaaagatgaccgtgtccaaggactccacg
gacctgcctgaggagtcgcggcgggagctgctggagcagatagcaaactgctgcatgcgc
cagggcagctaccacctggccaccaagaagtacacgcaggctgggaacaagctgaaggcc
atgagagcactgctcatgtctggagacacggagaaaatcacgttctttgcgagcgtgtcc
aggcagaaggaaatctacatcatggctgccaactacctgcagtccctggactggcgcaag
gagccggagattatgaagaacatcatcagcttctacaccaaggggcgggctctggacctc
ctggccagcttttacgatgcttgtgcccaggtggagattgatgaataccagaactatggc
aaagctcacggggcgctgaccgaggcttataagtgcctgtccaaggccaaggccaagagc
gccctggaccaggagaccaggctggctcagctgcagagcaggatggcactggtgaagagg
ttcctccaggcccgaaggacatacgcagaggaccccaaggcgtccatcaagcagtgcgag
ctgctcctggaggagccggacctggacagcactgttcgcattggggacgtctacggcttc
ctggtggagcgccatgtgcagacggaggagtaccagacggcctacaggttcctggaggag
atgcggcggcggcttccctcggccaacgtgtcctactatgtgagcccacaggctgtggag
gccgtgcaccagggactgggtctcccactgatgcacgctgcgcccgagcgggtccgacac
aacagcatggaggaccccagggagccggacgaggaggtggtggaagaggccgacgacccc
tga
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