Callithrix jacchus (white-tufted-ear marmoset): 100386750
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Entry
100386750 CDS
T03264
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03440
Homologous recombination
cjc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100386750 (BRIP1)
03460 Fanconi anemia pathway
100386750 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjc03400
]
100386750 (BRIP1)
Enzymes [BR:
cjc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100386750 (BRIP1)
DNA repair and recombination proteins [BR:
cjc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
100386750 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
100386750 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
ARCH_RTEL1
CedA
HBB
Motif
Other DBs
NCBI-GeneID:
100386750
NCBI-ProteinID:
XP_002806878
Ensembl:
ENSCJAG00000001292
LinkDB
All DBs
Position
5:91010522..91190788
Genome browser
AA seq
1252 aa
AA seq
DB search
MSAMWSEYTISGVKINFPYKAYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSA
LAWQQSLSGKPADEGISEKAEVPLSCCCTCHSKDFTNNDMNQGTSHHFNNPSTPPSERNE
TPSACQDSPAKTTLAAKLSAKKQASVYRDENDDFQVEKKRIRPLETAQQIRKRHCFGTEV
HNSDAKLDSGKTIKRNSPLGKINSLSPQKPPRHCSWCCCSTKQGNSQESLNTIKKDHTGK
SKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCME
LLDGKNGKSCYFYHGVHKISDQHTLQTFQGMCKAWDIEELVSLGKKLRACPYYTARELIQ
DADIIFCPYNYLLDAQIRETMDLNLKEQVVILDEAHNIEDCARESASYSVTEVQLRFARD
ELDSMVNNNVRKKDHEPLRAVCYSLINWLEANSEYLVERDYESSCKIWSGNEMLLNLHKM
GITTATFPILQGHFSAVLQKEEKIPPIYGKEEAIEVPIISASTQIMLKGLFMVLDYLFRQ
NSRFADDYKIAIQQTYSWTNQVDISDKNGWLVLPKNKKRSRQKTAVHVLNFWCLNPAVAF
SDINGKVRTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVIKNSQVWVGTVGSGPKGRNL
CATFQNTETFEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHKLELV
KTVIVEPQGGEKTDFDELLQVYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVI
TIGIPFPNVKDLQVELKRQYNDHHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHRNDWG
ALILVDDRFRNNPGRYISGLSKWIRQQIQHHSTFESALESLAEFSKRRQKVLDVSIKDRA
NIQDNGSTLEVTSLMDSTPTYLLEAASHLSPENFVKDEAKMCVQELQCPEIITKNSPLPS
GIISRKERNDPVFLEEPVQAMKAEKIVISRSTSPTFNKQTNRVTWSSFNSLGQYFTGKIP
KSTPELRSSKNIASSPPSFKTEKMESKTVLPFTDKCESSNLTVNTSFGSCPQSETIISSL
KIDGTLIRKNHPEYPLCSEEALDPDIELSLVSEEDKQSTSNRDFDTEAEDESIYFTPELY
DPEDTNEEKNDQVETDRGNRLANNSDCILAEDLFEIRTIKEIDSAREVKAEDCTDTKLNG
ILHIEENKIDDIDGNVKTTWINELELGNTHEIEIKNFKPSPSKNKGMFHSFK
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaatgtggtctgaatatacaattagcggggtgaagattaactttccttataaa
gcttacccatcacagcttgctatgatgaattctattctcagaggattaaacagtaagcag
cattgtttattggagagtcccacaggaagtggaaaaagcttagccttactttgttctgct
ttagcatggcaacagtcccttagtgggaagccagcagatgagggcataagtgaaaaagct
gaagtaccattgtcatgttgttgtacatgccattcaaaggattttacaaacaatgatatg
aaccaaggaacttcacatcatttcaacaatccaagcacaccaccttctgaaagaaatgag
actccatcagcttgtcaagactcccctgcaaaaaccaccctggctgccaagttatctgct
aagaaacaggcatccgtatacagagatgaaaatgatgattttcaagtagagaagaaaaga
attcgacccttagaaactgcacagcagattagaaaacgtcattgctttggaacagaagta
cacaattcggatgcaaaacttgattcaggaaagaccataaaacgcaactctccattggga
aagataaactccttgtctccacaaaaaccccctcgccactgttcgtggtgctgttgttct
actaaacaaggaaacagtcaagagtcattgaataccattaagaaagatcacacggggaaa
tccaagatacccaaaatatattttgggacgcgcacacacaagcagattgctcagattact
agagagctccggaggacggcatattcaggggtcccaatgactattctttccagcagggat
catacttgtgtccatcctgaagtagttggtaacttcaacagaaatgaaaagtgcatggaa
ttgctggatgggaaaaatggaaaatcctgctatttttatcatggagttcataaaattagt
gatcagcacacattacagactttccaagggatgtgtaaagcctgggatatagaagagctt
gtcagcttagggaagaaactaagggcctgtccatattacacagcccgagaactaatacaa
gatgctgacatcatattttgtccctacaactatcttctagatgcacaaataagggaaacc
atggatttaaatctgaaagagcaggttgtcattttagatgaagctcataacatcgaggac
tgtgctcgggaatcagcaagctacagtgtaacagaagttcagcttcgatttgctcgggat
gaactagatagtatggtcaacaataatgtaaggaaaaaagatcatgaacccctacgagct
gtgtgctatagcctcattaattggttagaagcaaactctgaatatcttgtagaaagagat
tatgaatcatcttgtaaaatatggagtggaaatgaaatgctcttaaatttgcacaaaatg
ggcattaccactgctacttttcccattttgcagggccatttttctgctgttcttcagaaa
gaggaaaaaatcccaccaatttatggtaaagaggaagcaatagaagtgccaattattagt
gcatcaactcaaataatgcttaaaggactttttatggttcttgactacctttttaggcaa
aacagcagatttgcggatgattataaaattgctattcaacagacttattcatggacaaat
caggttgatatttcagataaaaatgggtggttggttctaccaaaaaataagaaacgttca
cgacagaagactgcagttcatgtgctcaacttttggtgcttaaatccagctgtggccttt
tcagatattaatggcaaagttcggactattgttttgacatccggtacattatcaccaatg
aaatccttttcgtcagaacttggggttacatttaccatccagctggaggctaatcatgtc
attaaaaattcacaggtttgggttggtaccgttggatcaggccccaagggtcggaatctc
tgtgctaccttccaaaatactgaaacatttgagttccaagatgaagtgggagcactttta
ttatctgtgtgccagactgtgagccaaggaattttgtgttttttgccatcttacaagtta
ttagaaaaattgaaagaacgttggctctctactggcttatggcataaactggagttggtg
aagacagtcattgtagaaccacagggaggagaaaaaacagattttgatgaattactgcag
gtgtactatgatgcaatcaaatacaaaggagagaaagatggagccctcctggtagcagtt
tgtcgtggtaaagtgagtgagggtctggatttctcagatgacaatgcccgtgctgtcata
acaataggaattccttttccaaatgtgaaagatctacaggttgaactaaaacgacaatac
aatgaccaccattcaaaattgagaggtcttttacctggccgtcagtggtatgaaattcaa
gcatacagggccttaaaccaggcccttggtagatgtattcgacacagaaatgattgggga
gctcttattctagtggatgatcgttttaggaataacccaggtcgctatatatctggactt
tctaaatggatacggcagcagattcagcatcattcaaccttcgaaagtgccctggagtcc
ttggccgaattttccaaaaggcgtcaaaaagttcttgatgtatccataaaggacagagca
aatatacaggacaatgggtccacacttgaagtgacctctttaatggacagtaccccaact
tatttattggaagcagcaagtcatctatcaccagaaaattttgtgaaagatgaagcaaag
atgtgtgtccaggaactacagtgtcctgaaatcattactaaaaattcacctctaccaagt
ggcatcatctccagaaaggagagaaatgatccagtattcctggaagagcctgtccaagca
atgaaagcagaaaaaattgtgatttccagatccacaagcccaacttttaacaaacaaaca
aacagagttacttggtccagctttaattctttgggacagtattttactggtaaaatacca
aagtcaacacctgagctcaggtcatcaaagaatattgcctcaagtcctcccagtttcaaa
acagaaaagatggaaagtaaaactgttttgccattcactgataaatgtgaatcctcaaat
ctgacagtaaacacatcatttggatcatgccctcagtcagaaaccattatttcatcatta
aagattgatggaacccttattagaaaaaatcatcccgaatatcctctctgttctgaagaa
gccctagatccagacattgaattgtctctagtaagtgaagaagataaacaatccacttca
aatagagattttgacacagaagcagaagatgaatctatctattttacacctgaactttat
gatcctgaagacacaaatgaagaaaaaaatgaccaagtcgaaactgatagaggaaacaga
ttggctaacaattcagattgcattttagctgaagacctttttgaaattagaactataaaa
gaaatagattcagccagagaagtgaaagctgaggattgcacagatacaaagttgaatgga
attctgcatattgaagaaaataaaattgatgacattgatggtaatgtaaaaacaacttgg
ataaatgaattggaactgggaaacactcatgaaatagaaataaagaactttaaaccatct
ccttccaaaaataaaggtatgtttcatagttttaagtaa
DBGET
integrated database retrieval system
