Callithrix jacchus (white-tufted-ear marmoset): 100386802
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Entry
100386802 CDS
T03264
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100386802 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100386802 (CLP1)
Enzymes [BR:
cjc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
100386802 (CLP1)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
100386802 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_18
ATP_bind_1
TniB
MMR_HSR1
AAA_22
AAA_16
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
100386802
NCBI-ProteinID:
XP_002755334
Ensembl:
ENSCJAG00000008748
UniProt:
U3BTP7
LinkDB
All DBs
Position
11:111993341..111997833
Genome browser
AA seq
425 aa
AA seq
DB search
MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLTGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggggaagaggctaatgatgacaagaagccaaccactaaattcgaactagagcgagaa
acagaacttcgctttgaggtggaggcatctcagtcagttcagttggagttgttgactggc
atggcagagatctttggcacagagctgacccgaaacaagaaattcacctttgatgctggt
gccaaggtggctgttttcacttggcatggctgttctgtgcaactgagcggccgcactgag
gtggcttatgtctccaaggacactcctatgctgctttaccttaacactcacacagccttg
gaacagatgcggaggcaagcagaaaaggaagaagagagaggcccccgagtgatggtagtg
ggccccactgatgtgggcaagtctacagtgtgtcgccttctgctcaactatgcagtgcgt
ttgggccgccgtcccacttatgtggagctggatgtgggccagggttccgtgtccatccct
ggtaccatgggggccctctacattgagcggcctgcagatgtggaagagggtttctctatc
caggctcctcttgtgtatcattttggttccaccactcctggcaccaacatcaagctttat
aataagattacatctcgtttagcagatgtgttcaaccaaaggtgtgaagtgaacagaagg
gcatctgtgagtggctgtgtcattaatacctgtggctgggtcaagggctctggttatcag
gctctggtgcatgcagcctcagcttttgaggtggatgtcgttgtagttctggatcaagaa
cgactgtacaatgaactgaaacgggacctcccccactttgtacgcactgtgctgctccct
aaatctgggggtgtggtggaacgctccaaggacttccggcgggaatgtagggatgagcgt
atccgtgagtatttttatggatttcgaggctgtttctatccccatgctttcaatgtgaaa
ttttcagatgtgaaaatctacaaagttggggcacccaccatcccagactcctgtttacct
ttgggcatgtctcaggaggataatcagcttaagctagtacctgtcactcctggccgagat
atggtgcaccacctactgagtgtcagcactgctgaggggacagaggagaacctgtctgag
acaagtgtagctggcttcattgtggtgaccagtgtggacctggagcatcaggtgtttact
gttctgtctccagccccccgcccactgcctaagaatttccttctcatcatggacatccgc
ttcatggatctaaagtag
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