Callithrix jacchus (white-tufted-ear marmoset): 100386966
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Entry
100386966 CDS
T03264
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03022
Basal transcription factors
cjc03420
Nucleotide excision repair
cjc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100386966
09124 Replication and repair
03420 Nucleotide excision repair
100386966
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100386966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjc03021
]
100386966
03400 DNA repair and recombination proteins [BR:
cjc03400
]
100386966
Transcription machinery [BR:
cjc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100386966
DNA repair and recombination proteins [BR:
cjc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100386966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
ORC3_N
Motif
Other DBs
NCBI-GeneID:
100386966
NCBI-ProteinID:
XP_035147340
Ensembl:
ENSCJAG00000016246
LinkDB
All DBs
Position
2:complement(136671929..136701798)
Genome browser
AA seq
395 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNPRKHVTSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYDLIKTLKAAKIRVSVIGLSAEVRVCTALARETGGTYHVILDESHYKELLTHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDPFQEILLEEYNGERFCYGCQGELKDQHVYVC
AVCQNVFCVDCDVFVHDSLHCCPGCIHKIPAPSGV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaacctgaaagaactaagcgatgggaaggaggctatgaaagaacatgggag
attcttaaagaagatgaatctggatcacttaaagctacaatagaagacattctgtttaag
gcaaagagaaaaagagtatttgagcaccatggacaagttcgacttggaatgatgcgtcac
ctttatgtggtagtagatggatcaagaacaatggaagaccaagatttaaagcctaataga
ctgacatgtactttaaagttgttggaatacttcgtagaggaatattttgatcaaaatcct
attagtcagattggaataattgtaactaagagtaaaagagctgaaaaactgactgaactc
tcaggaaacccaagaaaacatgtaacatctttgaagaaagctgtggatatgacctgccat
ggagagccatctctttataattccttaagcatggctatgcaaactctaaaacatatgccc
ggacatacaagtcgagaagtactaatcatcttcagcagccttacaacttgtgatccatct
aatatttatgatctaatcaagaccctaaaggcagctaaaattagagtatctgttattgga
ttgtctgcagaggttcgagtttgcactgcacttgctcgtgaaactggcggcacataccac
gttattttagatgaaagccattacaaagaattactcacacatcatgttagtcctcctcct
gctagctcaagttctgaatgctcgctcattcgtatgggatttcctcagcacaccatcgct
tctttatcggatcaggatgcaaaaccctctttcagcatggcgcatttggatggcaatact
gagccagggcttacattaggaggctatttctgcccacagtgtcgggcaaagtactgtgag
ctacctgtcgaatgtaaaatctgtggtcttactttggtgtctgccccccacttggcacgg
tcttaccatcatttgtttcctttggatccttttcaagaaattctcctagaagaatataac
ggagaaagattttgttatggatgtcagggggaattgaaagaccaacatgtttatgtttgt
gctgtgtgccaaaatgtcttctgtgtggactgtgatgtttttgttcatgattctctacac
tgttgccctggctgtattcataagattccagctccttcaggagtttga
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integrated database retrieval system
