Callithrix jacchus (white-tufted-ear marmoset): 100387005
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Entry
100387005 CDS
T03264
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03030
DNA replication
cjc03410
Base excision repair
cjc03420
Nucleotide excision repair
cjc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100387005 (RFC1)
03410 Base excision repair
100387005 (RFC1)
03420 Nucleotide excision repair
100387005 (RFC1)
03430 Mismatch repair
100387005 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjc03032
]
100387005 (RFC1)
03400 DNA repair and recombination proteins [BR:
cjc03400
]
100387005 (RFC1)
DNA replication proteins [BR:
cjc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100387005 (RFC1)
DNA repair and recombination proteins [BR:
cjc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100387005 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
RuvB_N
AAA_14
Rad17
AAA_5
BRCT_2
AAA_16
AAA_22
nSTAND3
Zeta_toxin
AAA_33
AAA_7
AAA_17
AAA_18
RNA_helicase
AAA_30
TIP49
NTPase_1
NPHP3_N
Nexin_C
AAA_19
AAA_28
SKI
Motif
Other DBs
NCBI-GeneID:
100387005
NCBI-ProteinID:
XP_035149771
LinkDB
All DBs
Position
3:150575976..150667917
Genome browser
AA seq
1147 aa
AA seq
DB search
MDIRKFFGVIPSGKKLVSETVKKSEKTKSDEEPLKAKKGIKEIKVNSSRKEDDLKHKQPN
KKKRIIYDSDSESEETLQVKNAKKQPEKTPVSSKPSNISRQNPVTYISETDEEDDLMCKK
AASKSKENGRSTNSHLGTSDVKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSNKK
MVSSKRKEPSQNTNDSGLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
ALKDTEEGETFSSVQASLSKAEKHKYPHKVKTEHFSDERKSYSPKKQTKYESSEASLQHS
KSSADKIREVSSPKASSKLAIMRKKEESSYKETEPVASKRKEKAIELKGETKTPKKTKSS
PAKKESVSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLES
IERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIR
TMPGKKSKYEIAVEAEMKKESKLERTPQKNAQGKRKISPSKKESESKKSKLTSKRDSSAK
TIKKETDVFWRGLDFKEQVAEETSGDSKTRNLADDSSENKMENLLWVDKYKPTSLKTIIG
QQGDQSCANKLLRWLQNWHKSSSEDKKHAPKFGKFAGKDDGSSFKAVLLSGPPGVGKTTT
ASLVCQELGYSYVELNASDTRSKNSLKAIVAESLNNTSIKGFYSNGASSVSTKHAVIMDE
VDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIK
GAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAK
KDIKMGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKPVAAGGDM
KKHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQFPTFPS
WLGKHSSTGKHDRIVQDLALHISLRTYSSKRTVNMDYLSHLRDALVQPLTSQGVDGVQDV
VALMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLQAIK
ASRHSTSPALDLEYNEELNEDDSQSDEKDQDAVETDAMIKKKTKSSKPSKPEKDKESRKG
KGKSSKK
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggacattcggaaattctttggagtaataccaagtggaaagaaacttgtaagtgaaaca
gtaaagaaaagtgagaaaacaaagtctgatgaagaacctttaaaagcaaagaaaggaata
aaggaaatcaaggtaaatagctcccgtaaagaggatgacctcaaacacaagcaaccaaac
aagaaaaagaggatcatctatgattcagactcagagtcagaggagacgttgcaggtaaaa
aatgccaaaaagcaaccagaaaaaacaccggtgtcttctaaacccagtaacatttcacgg
cagaatcctgttacatacatttcagaaacagatgaagaagatgaccttatgtgtaagaag
gcagcctctaaatcaaaagagaatggaagatctacaaatagtcaccttggaacatcagat
gtgaagaagaatgaagaaaacactaagaccaagaataagcctttatcaccaataaaactt
acacccacatcagtgcttgattattttggaactggaagtgtccaaagatctaataagaag
atggtgtcaagcaaaagaaaagagccttcacaaaatacaaatgattctggattaaatgat
gaagccatcgccaagcaattacagcttgatgaagatgcagagctggagaggcagttgcat
gaagatgaagagtttgccagaacattagccatgttggatgaagaacccaagaccaaaaag
gctctaaaggacacagaagagggagaaacgttttcatctgtccaagccagtttaagtaaa
gcagaaaaacataaatatcctcataaagtaaaaacagaacacttttcagatgaaagaaag
agctacagtcctaagaagcaaactaaatatgaaagttcagaagcatctctgcaacattcc
aagtcatcagctgacaaaataagagaagtttcttctcccaaggccagttctaagctggca
attatgagaaaaaaagaagagagctcttacaaagaaacagaaccagttgcctcaaaaaga
aaagaaaaggccattgaattgaaaggagagacaaaaactcctaagaaaaccaaaagttct
ccagctaagaaagagtctgtaagtcctgaagattctgaaaagaaacgcactaattaccag
gcttatcgaagctacttaaatcgagaaggtcccaaagctctgggctccaaagaaatacca
aagggagctgaaaattgcttggaaggccttacgtttgtaatcacaggcgtgctggagtct
attgaaagagatgaggccaagtctctaattgaacgttatggggggaaagtaacaggaaat
gtcagcaagaaaacaaactaccttgtcatgggtcgtgatagtggacagtccaagagtgac
aaggccgcagccttggggacaaaaattattgatgaagatggcctgttgaatctgattcga
actatgccaggcaagaaatccaagtacgaaatagcagttgaagctgagatgaagaaagag
tccaaactggagagaacaccccaaaaaaatgcacaaggaaaaaggaaaattagtccatct
aaaaaggaatcagaatctaaaaagagcaagctgacttccaaaagggacagttcggcaaag
acaataaaaaaggaaacagatgtgttttggagaggcctggatttcaaggagcaggtggcc
gaggagacaagtggtgacagcaagactaggaatttggctgatgacagcagtgaaaacaaa
atggaaaatttactctgggtggataaatataagccaacctcgctcaagaccataattgga
cagcaaggtgatcagagctgtgccaacaaactcctacgctggctccaaaactggcacaag
agttcttctgaagataaaaaacatgcaccaaagtttggcaaatttgccggcaaagatgat
ggctctagttttaaagcagtgttgctgtcaggccctccaggtgttggcaaaaccaccaca
gcttccctggtgtgtcaggagttgggatacagctacgtggaactgaatgcaagtgacacc
cgaagtaagaacagtttgaaggcgattgttgctgagtcactgaacaataccagcatcaaa
ggcttttattcaaatggagcctcttcagtaagcacgaagcatgctgtcatcatggatgaa
gtagatggcatggcaggcaatgaggataggggaggaattcaggaattaattggcctgata
aagcatactaaaattcccattatttgtatgtgcaatgatagaaatcatcccaaaattcgt
tctctggttcattattgttttgatcttcgttttcaaagacctcgggttgaacagattaag
ggtgctatgatgtctattgcatttaaagaaggtttaaagattccccctccagctatgaat
gaaataattttgggagccaatcaagatatcagacaggttttacataatctgagtatgtgg
tgtgcacgaagtaaagcattaacctatgaccaggccaaggctgattctcacagggccaaa
aaggatatcaaaatgggcccctttgatgttgcccggaaagtgtttgcagctggagaggag
actgctcacatgtcacttgtggacaaatcagatctcttttttcatgattattcaatagca
cccctctttgtccaggaaaactacatacatgtgaagcctgtcgctgcagggggtgacatg
aaaaagcacttgatgcttttaagccgagcagcagacagcatatgcgatggtgacttagtg
gacagccagattcggagtaagcaaaactggagtcttctgcctacgcaggccatttatgcc
agtgttcttcctggagagttgatgagggggtacatgacccagtttcccaccttcccaagc
tggctagggaagcactcatctacaggcaaacacgatcgcattgttcaggacctggccttg
catataagtctcagaacttactccagcaaaaggacggtaaacatggattatctgtcacat
ctaagggatgcacttgtacagcctttgacctcacaaggagtagatggagtacaggatgtt
gttgcacttatggacacatattatttgatgaaagaagactttgagaatatcatggaaatt
agcagctggggtggcaaacctagtcccttttcaaagctggatcccaaggtgaaagcagcc
ttcacaagagcttacaataaggaagcccaccttactccatattcacttcaagcaataaag
gcatctagacatagcacaagcccagccctggatttggaatacaatgaagagttaaatgaa
gatgactctcaatctgatgagaaagaccaagatgctgtagagactgatgccatgatcaag
aaaaagacaaaatcttcaaagccttcaaaaccagaaaaagataaggagtccagaaaagga
aaaggaaaaagttcgaagaaataa
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integrated database retrieval system
