Callithrix jacchus (white-tufted-ear marmoset): 100387158
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Entry
100387158 CDS
T03264
Symbol
LRFN5
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cjc04990
]
100387158 (LRFN5)
Domain-containing proteins not elsewhere classified [BR:
cjc04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
100387158 (LRFN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
Ig_3
I-set
LRR_5
LRR_1
ig
LRR_9
Ig_2
fn3
DUF240
Motif
Other DBs
NCBI-GeneID:
100387158
NCBI-ProteinID:
XP_017832559
Ensembl:
ENSCJAG00000016083
UniProt:
U3EDN0
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All DBs
Position
10:72022295..72329467
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AA seq
719 aa
AA seq
DB search
MEKILFYLFFIGIAVKAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLAD
NFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFS
GLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDH
NMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPPLLTGRYFWSIPEEEFLCEPPLITRHTHEMRVLE
GQRATLRCKARGDPEPAIHWISPEGKLISNATRSLVYDNGTLDILITTVKDTGAFTCIAS
NPAGEATQIVDLHIIKLPHLLNSTNHIHEPDPGSSDISTSTKSGSNTSSSNGDTKLSQDK
IVVAEATSSTALLKFNFQRNIPGIRMFQIQYNGTYDDTLVYRMIPPTSKTFLVNNLAAGT
MYDLCVLAIYDDGITSLTATRVVGCIQFTTEQDYVRCHFMQSQFLGGTMIIIIGGIIVAS
VLVFIIILMIRYKVCNNNGQHKVTKVSNVYSQTNGAQIQGCSVTLPQSVSKQAVGHEENA
QCCKAATDNVIQSSETCSSQDSSTTTSALLPSWTSSTSVSQKQKRKTGPKPSTEPQNEAG
TNVESQNTNRNNSTALQLASRPSDSVREGPTSKRAHTKPNALLTNVDQIVQETQRLELI
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaattcttttttatctgtttttcattggcatagcagtgaaagctcagatctgt
ccaaagcgttgtgtctgtcagattttgtctcctaatcttgcaaccctttgtgccaagaaa
gggcttttatttgttccaccgaacattgacagaagaactgtggaactgcggttggcagac
aattttgttacaaatattaaaaggaaagattttgccaatatgaccagcttggtggacctg
actctatccaggaatacaataagttttattacacctcatgctttcgctgacctacgaaat
ttgagggctttgcatttgaatagcaacagattgactaaaattacaaatgatatgttcagt
ggtctttccaatcttcatcatttgatattaaacaacaatcagctgactttaatttcctct
acagcatttgatgatgtcttcgcccttgaggagctggatctgtcctataataatctagaa
accattccttgggatgctgttgagaagatggttagcttgcataccctcagtttggatcac
aatatgattgataacattcctaaggggaccttctcccatttgcacaagatgacgcggtta
gatgtgacatcaaacaaattgcagaagctaccacctgaccctctcttccagcgagctcag
gtactagcaacctcaggaatcataagcccatctacttttgcattaagttttggtggaaac
cctttgcattgcaattgtgaattgttgtggttgaggcgtctgtccagagaagatgactta
gagacctgtgcttctcctccacttttaactggccgctacttttggtcaattcctgaagaa
gagtttttgtgtgagcctcctctcattactcgtcatacacatgagatgagagtcctggag
ggacaaagggcaacactgaggtgcaaagccaggggagaccctgagcctgcaattcactgg
atttctcctgaagggaagcttatttcaaatgcaacaagatctctggtgtatgataatgga
acacttgacattcttataacaactgtaaaggatacaggtgcttttacctgcattgcttcc
aatcctgctggggaagcaacacaaatagtggatcttcatataattaagctccctcactta
ctaaacagtacaaaccatatccatgagcctgatcctggttcttcagatatctcaacttct
accaagtcagggtctaatacaagcagtagtaatggtgatacaaaattgagtcaagataaa
attgtggtggcagaagctacatcatcaacagcactacttaaatttaattttcaaagaaat
atccctggaatacgtatgtttcaaatccagtacaatggtacttatgatgacactcttgtt
tacagaatgatacctcctacgagcaaaacttttctggtcaataatctggctgccggaact
atgtatgacttatgtgtcttggccatatatgatgatggcatcacttccctcactgccaca
agagtcgtgggttgcatccagtttactacggaacaggattatgtgcgttgccatttcatg
cagtcccaatttttgggaggcaccatgattattattattggtggaataattgtagcatct
gtgctggtattcatcatcattctgatgatccggtataaggtttgcaacaataatgggcaa
cacaaggtcaccaaggttagcaatgtttattctcaaactaacggggctcagatacaaggc
tgcagtgtaacgctgccccagtctgtgtccaaacaagctgtgggacacgaagagaatgcc
cagtgttgtaaagctgccactgacaatgtgattcaatcttcagaaacttgttcgagtcag
gactcctctaccactacctctgctttgcttccttcctggacttcaagcacttctgtgtcc
caaaagcagaaaagaaagactggcccaaagccaagtaccgaaccacagaatgaagctggc
acaaatgttgagtcccaaaacactaacaggaacaactcaactgccttgcagttagctagc
cgaccttccgattctgtcagagaggggcccacatctaaaagagcacatacaaagccaaat
gctttgctgactaatgttgaccagattgtccaggaaacacagaggctggagttaatctga
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