Callithrix jacchus (white-tufted-ear marmoset): 100387407
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Entry
100387407 CDS
T03264
Symbol
CAPRIN1
Name
(RefSeq) caprin-1 isoform X1
KO
K18743
caprin-1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100387407 (CAPRIN1)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
100387407 (CAPRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
100387407
NCBI-ProteinID:
XP_035118231
Ensembl:
ENSCJAG00000010542
UniProt:
U3DCM5
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All DBs
Position
11:96153241..96203333
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AA seq
709 aa
AA seq
DB search
MPSATSHSGSGSKSSGPPPPSGSSGSEAAAGAGAAAPASQHPATGTGAVQTEAMKQILGV
IDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALS
QDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSE
EELSLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLLEGKEKSVCGTTYKVLKEIVERV
FQSNYFDSTHNHQNGLCEEEEAASAPTVEDQVAEAEPEPAEEYTEQNEVESTEYVNRQFM
AETQFTSGEKEQVDEWTVETVEVVNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQ
DLMAQMQGPYNFIQDSMLDFENQTLDPAIVSAQPMNPAQNMDMPQLVCPPVHSESRLAQP
NQVPVQPEATQVPLVSSTSEGYTGSQPLYQPSHATEQRPQKEPIDQIQATISLNTDQTTA
SSSLPAASQPQVFQAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQ
YQASYNQSFSSQPHQVEQTELQQEQLQTVVGTYHGSPDQSHQVTGNHQQPPQQNTGFPRS
SQPYYNSRGVSRGGSRGARGLMNGYRGPANGFRGGYDGYRPSFSNTPNSGYTQSQFSAPR
DYSGYQRDGYQQNFKRGSGQSGPRGAPRGRGGPPRPNRGMPQMNTQQVN
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgccctcggccaccagccacagcgggagcggcagcaagtcgtccggaccgccaccgccg
tcgggatcctccgggagtgaggcggctgcgggagccggggccgccgcgccggcttctcag
caccctgcaactggcaccggcgctgtgcagaccgaggccatgaaacagatcctcggggtg
atcgacaagaaacttaggaacctggagaagaaaaagggtaagcttgatgattaccaggaa
agaatgaacaaaggggaaaggcttaatcaagatcagctggatgccgtttctaagtaccag
gaagtcacaaataatttggagtttgcaaaagaattacagaggagtttcatggcactaagt
caagatattcagaaaacaataaagaagacagcacgtcgggagcagcttatgagagaagaa
gctgaacagaaacgcttaaaaactgtacttgagttacagtatgttttggacaaactggga
gatgatgaagtgcgaactgacctgaaacaaggtttgaatggagtgccaatattgtccgaa
gaggaattgtcattgttggatgaattctataagttagtagaccctgaacgggacatgagc
ttgaggttgaatgaacagtatgagcatgcctccattcacctgtgggacctgctggaaggg
aaggaaaaatctgtatgtggaaccacctataaagttctaaaggaaattgtcgagcgtgtt
tttcagtcaaactactttgacagcacccacaaccaccagaatgggttgtgtgaggaagaa
gaggcagcctcagcacctacagttgaagaccaggtagctgaagctgaacctgagccagca
gaagagtacactgagcaaaatgaagttgaatcaacagagtatgtaaatagacagttcatg
gcagaaacacagttcaccagtggtgaaaaggagcaggtagatgagtggacagttgaaaca
gttgaggtggtaaattcactccagcagcaacctcaggctgcatccccttcagtaccagag
ccccactctttgactccagtggctcaagcagatccccttgtgagaagacagcgagtacaa
gaccttatggcacagatgcagggtccctataatttcatacaggattcaatgctggatttt
gaaaaccagacacttgatcctgccattgtatctgcacagcctatgaatccagcacaaaac
atggacatgccccagctggtttgccctccagttcattctgaatctagacttgctcagcct
aatcaagttcctgtacaaccagaagccacacaggttcctttggtgtcatccacaagtgag
gggtatacaggatctcaacccttgtaccagccttctcatgccacagagcaacgaccacag
aaggaaccaattgatcagattcaggcaacaatctctttaaatacagaccagactacagca
tcatcatcccttcctgctgcttctcagcctcaagtatttcaggctgggacaagcaaacct
ttacatagcagtggaatcaatgtaaatgcagctccattccaatccatgcaaacggtgttc
aatatgaatgccccagttcctcctgttaatgaaccagaaactttaaaacagcaaaatcag
taccaggccagttataaccagagcttttctagtcagcctcaccaagtagaacaaacagag
cttcagcaagaacagcttcaaacagtggtgggcacttaccatggttccccggaccagtcc
catcaagtgactggtaaccaccagcagcctcctcagcagaacactggatttccacgtagt
agtcagccctattacaatagccgtggtgtgtctcgtggaggttcccgtggtgctagaggc
ttgatgaatggataccggggccctgccaatggattcagaggaggatatgatggttaccgc
ccttcattctctaacactccaaacagtggttatacacagtctcagttcagtgctccccgg
gattactctggctatcagcgggatggatatcagcagaatttcaagcgaggctctgggcag
agtggaccacggggagccccacgaggtcgtggagggcccccaagacccaacagagggatg
ccgcaaatgaacactcagcaagtgaattaa
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