Callithrix jacchus (white-tufted-ear marmoset): 100387580
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Entry
100387580 CDS
T03264
Symbol
YTHDC1
Name
(RefSeq) YTH domain-containing protein 1 isoform X2
KO
K20100
YTH domain-containing protein 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjc03041
]
100387580 (YTHDC1)
Spliceosome [BR:
cjc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100387580 (YTHDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
100387580
NCBI-ProteinID:
XP_003732542
Ensembl:
ENSCJAG00000009934
LinkDB
All DBs
Position
3:125243226..125279390
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AA seq
728 aa
AA seq
DB search
MAADSREEKDGELNVLDDILTEVPEQDDELYNPESEQDKNEKKGSKRKSDRMESTDTKRQ
KPSVHSRQLVSKPLSSSVSNNKRIVSTKGKSVTEYKNEEYQRSERNKRLDADRKIRLSSS
ASREPYKNQPEKTCLRKRDPERRAKSPTPDGSERIGLEVDRRASRSSQSSKEEVNSEEYG
SDHETGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEE
EEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSESVSFTDGSVRSGSGTDGSDEKKK
ERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSVRAVRKDQTSKLKYVLQDARFFL
IKSNNHENVSLAKAKGVWSTLPVNEKKLNVAFRSARSVILIFSVRESGKFQGFARLSSES
HHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIGRDGQE
IELECGTQLCLLFPPDESIDLYQVIHKMRHKRRMHSQPRSRGRPSRREPVRDVGRRRPED
YDIHNSRKKPRIDYPPEFHQRPGYLKDPRYQEVDRRFSGVRRDVFLNGSYNDYVREFHNM
GPPPPWQGMPPYPGMEQPPHHPYYQHHAPPPQAHPPYSGHHPVPHEARYRDKRVHDYDMR
VDDFLRRTQAVVSGRRSRPRERDRERERDRPRDNRRDRERDRGRDRERERERLCDRDRDR
GERGRYRR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacagtcgggaggagaaagatggagaacttaatgttctagatgatattttg
actgaagtaccagaacaggatgatgaactgtataatccagagagtgaacaagataaaaat
gaaaaaaagggatcaaaaagaaaaagtgatcgaatggaatctactgataccaagcgacaa
aagccttctgtccattcaagacaactggtttctaagccactgagctcatctgttagcaat
aacaaaagaatagtcagtacaaaaggaaagtcagtcacagagtataaaaatgaggaatat
caaagatctgaaagaaacaagcgtctagatgctgatcggaaaattcgtctatcgagtagt
gcctctagagaaccttataagaatcaacctgaaaaaacctgtctccggaaaagggatcct
gaaaggagggccaaatcccctacgccagatggttctgagagaattgggcttgaagtggat
agacgtgcaagcagatccagccagtcttctaaggaagaggtgaactctgaagaatatggc
tctgatcatgagactggcagcagtggttcttctgatgaacaaggtaacaacactgagaat
gaggaggaaggagtggaagaagatgtggaggaagatgaagaggtagaagaagatgcagaa
gaagatgaagaggtggatgaagatggagaggaggaagaggaagaggaagaggaggaagaa
gaggaggaggaggaagaggaagaagaagaatatgaacaggatgagagagaccagaaagag
gagggaaatgattatgacactcgaagtgaggccagtgactctggctcggaatctgtttcc
ttcacagatgggtccgtcagatctggttcaggcacagatggatcagatgagaaaaagaag
gaaaggaagagagctagaggcatatctccaattgtttttgatagaagtggaagctctgca
tcagagtcatatgcaggttcagaaaagaagcatgagaaattatcatcttccgttcgtgct
gtccgaaaagatcaaaccagtaaactcaaatatgtgcttcaagatgcaagatttttcctc
ataaagagtaacaaccatgagaatgtgtctcttgccaaagctaagggtgtatggtccacg
ctccctgtaaatgagaagaaattaaatgttgcatttagatctgcaaggagtgttatctta
atattttctgtcagagagagtggaaaatttcaagggtttgcaagactttcttcagaatca
catcacggaggatctcctatacactgggtgcttccagcaggaatgagtgctaaaatgctg
ggaggtgtctttaaaattgactggatttgcaggcgtgaattaccgttcactaagtcagct
catctcaccaatccttggaatgaacataaaccagtaaagatcggacgtgatggacaggaa
attgaacttgaatgtggaacccagctttgtcttctatttccccccgatgaaagtattgac
ttgtatcaggtcattcataaaatgcgtcacaagagaagaatgcattctcagcccagatca
cgaggacgtccatcccgtcgagaaccagtccgggatgtgggaaggcgtcgaccagaagat
tatgatattcataacagcagaaagaaaccaaggattgactatccccctgagtttcaccag
agaccagggtatttaaaggatccacgataccaggaagttgacagacgattttcaggagtt
cgccgagatgtgtttttaaatgggtcctacaatgattatgtgagggaatttcataacatg
ggaccaccaccaccttggcaaggaatgcccccttatccaggaatggaacaacctccacac
catccttattatcagcaccatgctccacctcctcaagcacatcccccttattcaggacat
catccagtaccacatgaagcaagatacagagataaacgagtacatgattatgatatgagg
gtggatgatttccttcgtcgaacacaagctgttgtcagtggtcggagaagtagaccccgt
gaaagagatcgggaacgagagcgagaccgccctagagataacagaagagacagagagcga
gatagaggacgtgatagagaaagagaaagagagcgattatgtgatcgggacagagaccga
ggggagagaggtcgatatcgaagataa
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