Callithrix jacchus (white-tufted-ear marmoset): 100387710
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Entry
100387710 CDS
T03264
Symbol
PTCHD4
Name
(RefSeq) patched domain-containing protein 4 isoform X1
KO
K24682
patched domain-containing protein
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cjc04990
]
100387710 (PTCHD4)
Domain-containing proteins not elsewhere classified [BR:
cjc04990
]
Other domain-containing proteins
Patched domain-containing proteins
100387710 (PTCHD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
100387710
NCBI-ProteinID:
XP_002746670
Ensembl:
ENSCJAG00000011815
UniProt:
A0A5F4W7W3
LinkDB
All DBs
Position
4:complement(52495883..52702313)
Genome browser
AA seq
904 aa
AA seq
DB search
MCFLRRPGAPASWIWWRMLRQVLRRGLQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSA
LNRFQPEGDLERLVAPSHSLAKIERSLASSLFPLDQSKSQLYSDLHTPGRYGRVILLSPP
GDNILLQAEGILQTHRAVLEMKVNHKGYNYTFSHLCVLRNQDKKCVLDDIISVLEDLRQA
AVSNKTTARVQVRYPNTKLKDGRNSFIGHQLGGVVEVPNSKDQRVKSARAIQITYYLQTY
GSATQDLIGEKWENEFCKLMRKLQEEHQDLQLYSLASFSLWRDFHKISILARSKVLVSLV
LILTTATLSSSMKDCLRSKPFLGLLGVLTVCISIITAAGIFFITDGKYNSTLLGIPFFAM
GHGTKGVFELLSGWRRTKENLPFKDRIADAYSDVMVTYTMTSSLYFITFGMGASPFTNIE
AVKVFCQNMCVSILLNYFYIFSFFGSCLVFAGQLEQNRYHSIFCCKIPSAEYLDRKPVWF
QTVMSDGHQQTSHHETNPYQHHFIQHFLREHYNEWITNIYVKPFVVILYLIYASFSFMGC
LQISDGANIINLLASDSPSVSYATVQQKYFSNYSPVIGFYVYEPLEYWNSSVQEDLRRLC
SGFTAVSWVEQYYQYLKVSNISASNKSDFISVLQSSFLKKPEFQHFRNDIIFSKAGDENN
IIASRLYLVARTSRDKQKEVIEVLEKLRPLSLSKSIRFIVFNPSFVFMDHYSLSVTVPVL
IAGFGVLLVLILTFFLVIHPLGNFWLILSVTSIELGVLGLMTLWNVDMDCISILCLIYTL
NFAIDHCAPLLYTFVLATEHTRTQCIKSSLQEHGTAILQNVTSFLIGLVPLLFVPSNLTF
TLFKCLLLTGGCTLLHCFVILPVFLTFFPPSKKHHKKKKRAKRKEREEIECIEIQENPDH
VTTV
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgtgctttttaagacggccgggagcgcctgcgagctggatctggtggaggatgctgcgg
caggtgcttcgcagagggctccagtcgttctgccacaggctgggcttgtgcgtgagccgg
cacccggtctttttcctcaccgtgcccgcagtcctgaccatcaccttcggcctcagcgcg
ctcaaccgcttccagcccgagggcgacctggagcgcctggtcgctcccagccacagcctg
gccaagatcgagcgcagcctggccagcagccttttccccctggaccagtccaaaagccag
ctctattcggacttacacacccctgggaggtatggcagggtgatcctcctctccccaccc
ggggacaatattttgctccaggctgaggggatcctgcagacccaccgagccgtgctggaa
atgaaggtgaaccacaagggctataattatactttttcccatctgtgtgtgttgagaaat
caggataagaaatgcgtgctggatgatattatttcagtgctagaggatctcaggcaggct
gccgtctccaataagacaacagccagggtgcaagtgaggtatcccaacactaaattaaag
gatgggaggaacagttttattggacatcaactgggcggggtagtggaagtgccaaacagc
aaagaccagcgggtcaagtcggccagagccattcaaatcacctactacctccagacctat
ggctctgccacccaagacctcataggggagaagtgggagaatgagttctgtaagcttatg
agaaagctccaggaggagcatcaagacctccagctctactctttagcatcctttagcctc
tggagagactttcataagatcagcatcctggccagaagcaaggtcctggtgagcctcgtg
ctgatcctgaccacagccaccctctccagctccatgaaggactgcttgcgcagtaagccc
ttcctgggcctcctgggggtgctcacggtgtgcatctccatcatcaccgcagcagggatc
ttcttcatcaccgatggaaagtacaactccaccctgctgggaatcccgttcttcgccatg
ggtcatggaactaaaggagtgtttgagcttctgtctggatggcggagaaccaaagagaac
ttgcccttcaaagacaggatagcagacgcctattctgatgtgatggtcacctacaccatg
accagctccctgtactttatcacgtttggcatgggtgccagtccattcacaaacatcgag
gctgtgaaggtcttctgtcaaaacatgtgtgtctccattctgttgaactacttctacatt
ttctccttctttggctcctgtctggtctttgctggccaactagagcaaaaccgctaccac
agcatcttttgctgtaaaatcccttctgcagaatatctggatcgtaaacctgtgtggttc
cagacagtgatgagtgatgggcatcaacagacctcccatcatgagacaaacccctatcag
caccacttcattcagcacttcctccgtgaacattataatgaatggattaccaacatatat
gtgaagccctttgtcgtcatcctctatctcatttatgcttccttctccttcatggggtgc
ttacagatcagtgacggagccaacatcatcaatctactagccagtgattcaccaagcgtt
tcctatgccacggttcagcagaaatatttcagcaactatagccctgtaataggattctat
gtatatgagcccttagagtactggaacagcagcgtccaggaggacctaagaagactctgt
agtggattcactgcagtctcctgggtggagcagtactatcagtacctgaaagtcagcaac
atcagtgccagtaacaaaagtgacttcattagtgtcctgcaaagctcatttttaaaaaag
ccagaattccagcattttcgaaatgatatcatcttctccaaggcaggggatgaaaacaac
atcattgcttctcgcttgtatctggtggccaggactagcagagacaagcagaaggaagtc
atagaagtgttggaaaagctaagacccctatccctctcaaagagcatccgattcatcgtg
ttcaacccctccttcgtcttcatggaccactacagcttgtctgtcacagtgcctgttctg
attgcaggctttggtgttctcctggtgttaatcctgacttttttcctagtgatccaccct
ctgggaaacttctggctaattcttagcgtcacctcaattgagctgggcgttctgggctta
atgaccttatggaacgtcgacatggattgcatttctatcttgtgccttatctacaccttg
aatttcgccattgaccactgtgcaccactgctttacacatttgtactagcaactgagcac
acccgaacacaatgtataaaaagctccctgcaagagcatgggacagccattttgcaaaat
gttacttcttttcttattgggttagtcccccttctatttgtgccttcgaacctgaccttc
acactgttcaaatgcttgctgctcaccgggggttgcacacttctgcactgttttgttatt
ttacctgtgttcctaacgtttttccccccttccaaaaagcaccacaagaaaaagaaacgt
gccaagcgaaaggaaagagaggaaattgaatgcatagaaattcaagagaaccctgatcat
gtcaccacagtctga
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