Callithrix jacchus (white-tufted-ear marmoset): 100387773
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Entry
100387773 CDS
T03264
Symbol
CPSF7
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03015
mRNA surveillance pathway
cjc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100387773 (CPSF7)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100387773 (CPSF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100387773 (CPSF7)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
100387773 (CPSF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
100387773
NCBI-ProteinID:
XP_002755455
Ensembl:
ENSCJAG00000019282
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All DBs
Position
11:complement(115174951..115201693)
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AA seq
471 aa
AA seq
DB search
MSEGVDLIDIYADEEFNQDPEFNNTDQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQEPS
PKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRA
NGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRECVRV
PRGGIPPRAHSRDSSDSADGRATPSENLVPSSARVDKPPSVLPYFNRPPSALPLMGLPPP
PIPPPPPLSSSFGVPPPPPGIHYQHLMPPPPRLPPHLAVPPPGAIPPALHLNPAFFPPPN
ATVGPPPDTYMKASAPYNHHGSRDSGPPPSTVSEAEFEDIMKRNRAISSSAISKAVSGAS
AGDYSDAIETLLTAIAVIKQSRVANDERCRVLISSLKDCLHGIEAKSYSVGASGSSSRKR
HRSRERSPSRSRESSRRHRDLLHNEDRHDDYFQERNREHERHRDRERDRHH
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaggagtggacttgattgatatatatgcagacgaggagttcaaccaggaccca
gagttcaataatacagatcagattgacctgtatgatgatgtgctgacagccacctcacag
ccttcagatgacagaagcagcagcactgagccacctcctcctgttcgccaggagccatct
cccaagcccaacaacaagacccctgcaattctgtatacctacagtggcctgcgtaataga
cgagctgccgtctatgtgggcagcttctcctggtggaccacagaccagcagctgatccag
gttattcgctctataggagtctatgatgtggtggagttgaaatttgcagagaatcgagca
aatggccagtccaaagggtatgctgaggtggtggtagcctctgaaaattctgtccacaaa
ttgttggaactcctaccaggaaaagttcttaatggagaaaaagtggacgtgaggccggcc
acccggcagaacctgtcacagtttgaggcacaggctcggaaacgtgagtgtgtccgagtc
ccaagagggggaatacctccacgggcccattctcgagattctagtgattctgctgatgga
cgggccacaccctctgagaacctagtaccctcatctgctcgtgtggataagccccccagt
gtgctgccctacttcaatcgtcctccttcagcccttcccctgatgggtctgcctccacca
ccaattccacccccaccacctctctcctcaagctttggggtccctcctcctcctcctggt
atccactaccagcatctcatgcccccacctcctcgattacctcctcatcttgctgtacct
ccccctggggccatcccacctgcccttcacctcaatccagccttcttccccccaccaaac
gctacagtggggcctccaccagatacttacatgaaggcctctgccccctataaccaccat
ggcagccgagattcgggtcctccaccctctacagtgagtgaagctgaatttgaagatatc
atgaagcgaaacagagcaatttccagcagtgccatttccaaagcggtatctggagccagt
gcaggggattacagtgacgcaattgagacgctgctcacagccattgcggttatcaaacag
tcccgggtcgccaatgatgagcgttgccgtgtcctcatctcctctcttaaggactgtctt
catggcattgaagccaagtcctacagcgtgggtgccagtgggagctcttccaggaaaaga
catcggtcccgggaaaggtcacctagccggtcccgggagagcagcaggaggcaccgggat
ctgcttcataatgaagatcggcatgatgattatttccaagaaaggaaccgggagcacgag
agacaccgggatagagaacgggaccggcaccactga
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