Callithrix jacchus (white-tufted-ear marmoset): 100388031
Help
Entry
100388031 CDS
T03264
Name
(RefSeq) LOW QUALITY PROTEIN: lysine--tRNA ligase-like
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100388031
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cjc01007
]
100388031
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjc03016
]
100388031
Enzymes [BR:
cjc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
100388031
Amino acid related enzymes [BR:
cjc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
100388031
Transfer RNA biogenesis [BR:
cjc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
100388031
Prokaryotic type
Other AARSs
100388031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
PGBA_C
Motif
Other DBs
NCBI-GeneID:
100388031
NCBI-ProteinID:
XP_035162534
LinkDB
All DBs
Position
1:complement(124808400..124810386)
Genome browser
AA seq
608 aa
AA seq
DB search
MCFDFWVGASGKMAAVHRAEVQVDGTEPKLNKNELKRRLKAEKKVAEKEAKQKELSEKQL
SQATAAATNHTADNGVGPEEESLDPNQYYKIRSQAIHQLKVSGEDPYPHKFHVDISLTDF
IQEYSHLQPGDHLTDITLRVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEE
FIHINNKLRRGDIIGVQGNPGKTKKGELSIILYEITLLSPCLHMLPHLHFGLKDKETRYH
QRYLDLILNDFVRQKFITRSKIITYIRSFMDELGFLEIETPMMNIIPGGAVAKPFITYHN
ELDMNLYMRIAPELYHEMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYH
DLMEITEKMVSGMVKHITGGYKVTYHPDGPEGQAYEIDFTPPFRRISMIEELEKSLGMKL
PETNLFETEETRKILDDICVAKAVECPPPRTTARLLDKLVGEFLRVTCINPTFICDHPQI
MSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRXRQLFEERAKAKAAGDDEAMF
IDENFCTTLEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMKPEDKKENVAPTETL
ESTVGTSV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttcgacttttgggtcggggcctccgggaagatggcagcagtgcacagggctgag
gtgcaagtggatggcaccgagccgaaactgaacaagaatgagctgaagagacgcctgaaa
gctgagaagaaagtagcagagaaggaggccaagcagaaagagcttagtgagaaacagcta
agccaagccaccgctgctgccaccaaccacactgctgacaatggtgtgggtcctgaggaa
gagagcctggacccaaatcaatactacaaaatccgcagtcaagcaattcatcagctgaag
gtcagtggggaagacccatacccacacaagttccatgtagacatctcactcaccgacttc
atccaagaatatagtcacctgcagcctggggatcacctgactgacatcaccttaagggtg
gcaggtaggattcatgccaaaagagcttctgggggaaagcttatcttctatgatcttcga
ggagagggggtgaagttgcaagtcatggccaattccagaaattataaatcagaagaagaa
tttattcatattaataacaaactgcgtcggggagacataattggagttcaggggaatcct
gggaagaccaagaagggtgaactgagcatcattctgtatgagatcacactgctgtctccc
tgtttgcatatgttacctcatcttcactttggcctcaaagacaaggaaacaaggtatcac
cagagatacctggacttgatcctgaatgacttcgtgaggcagaaatttatcacccgctct
aagatcatcacatatataagaagtttcatggatgagctgggattcctggagattgaaact
cccatgatgaacatcatcccagggggagctgtggccaagcctttcatcacttatcacaat
gagctggacatgaacttatatatgagaattgctccagaactctaccatgagatgcttgtg
gttggtggcatcgatcgggtttatgaaattggacgccagttccggaatgaggggattgat
ttgacacacaatcctgagttcaccacctgtgagttctacatggcctatgcagactatcac
gatctcatggaaatcacggagaaaatggtttcagggatggtgaagcatattacaggtggt
tataaagtcacctaccacccagatggcccagagggccaggcctatgaaattgacttcacc
ccacccttccggagaatcagcatgatagaagagcttgagaaatccctggggatgaagctg
ccagaaactaacctctttgaaactgaagaaactcgcaaaattcttgatgatatctgtgtg
gcaaaagctgtcgaatgccctccacctcggaccacagccaggctccttgacaagcttgta
ggggagttcctgagggtaacttgcatcaatcctacgttcatctgtgatcacccacagata
atgagccctttggctaaatggcaccgctctaaagagggtctgacagagcgctttgagcta
tttgtcatgaagaaagagatatgtaatgcctacactgagctgaatgatcccatgcggtag
cggcagctttttgaagaacgggccaaggccaaggctgcaggtgatgatgaggccatgttc
atagatgaaaacttctgtaccaccctggaatacgggctgccccccacggctggctggggc
atgggcattgaccgagtcgccatgtttctcacggactccaacaacatcaaggaagtactt
ctgtttcctgccatgaaacctgaagacaagaaggagaatgtagcacccactgagacgctg
gaaagtacagttggcacttctgtctag
DBGET
integrated database retrieval system
