Callithrix jacchus (white-tufted-ear marmoset): 100388253
Help
Entry
100388253 CDS
T03264
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100388253 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100388253 (LSM1)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100388253 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
100388253 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
100388253
NCBI-ProteinID:
XP_002757005
Ensembl:
ENSCJAG00000002631
UniProt:
F7B4D2
LinkDB
All DBs
Position
13:complement(35856440..35868660)
Genome browser
AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQTKLEAEKLKVQALKDR
GLSIPRADTLEEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactatatgcccggcaccgccagcctcatcgaggacattgataaaaagcacttggtc
ctgcttcgagatggaaggacacttataggctttttaagaagcattgatcaatttgcaaac
ttagtgctacatcagactgtggagcgtattcatgtgggcaaaaaatacggtgatattcct
cgagggatttttgtggtcagaggagaaaatgtggtcctactaggagaaatagacttggaa
aaggagagtgacacacccctccagcaagtatccattgaagaaattctagaagagcaaagg
gtggaacagcagaccaagttggaggcagagaagctgaaagtgcaggccctgaaggaccga
ggtctttccattcctcgagcagatactctggaggagtactaa
DBGET
integrated database retrieval system
