KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100388461
Entry
100388461         CDS       T03264                                 
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
  KO
K06237  collagen type IV alpha
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04151  PI3K-Akt signaling pathway
cjc04382  Cornified envelope formation
cjc04510  Focal adhesion
cjc04512  ECM-receptor interaction
cjc04820  Cytoskeleton in muscle cells
cjc04926  Relaxin signaling pathway
cjc04933  AGE-RAGE signaling pathway in diabetic complications
cjc04974  Protein digestion and absorption
cjc05146  Amoebiasis
cjc05165  Human papillomavirus infection
cjc05200  Pathways in cancer
cjc05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    100388461 (COL4A4)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100388461 (COL4A4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100388461 (COL4A4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100388461 (COL4A4)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    100388461 (COL4A4)
  09154 Digestive system
   04974 Protein digestion and absorption
    100388461 (COL4A4)
  09158 Development and regeneration
   04382 Cornified envelope formation
    100388461 (COL4A4)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100388461 (COL4A4)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    100388461 (COL4A4)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    100388461 (COL4A4)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    100388461 (COL4A4)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    100388461 (COL4A4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cjc04147]
    100388461 (COL4A4)
   00536 Glycosaminoglycan binding proteins [BR:cjc00536]
    100388461 (COL4A4)
Exosome [BR:cjc04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   100388461 (COL4A4)
Glycosaminoglycan binding proteins [BR:cjc00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   100388461 (COL4A4)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 100388461
NCBI-ProteinID: XP_054114141
LinkDB
Position
6:complement(145118534..145268928)
AA seq 1728 aa
MYHLCVVLRSDIIMVAVKFFVDIGKKPQGEHDNKSPYCQMSLHMVLMRCSFRLTKALGTD
PWSLILILFSVHYVYGSGKKYVGPCGGRDCSVCHCIPEKGSRGPPGPPGPQGPIGPLGAP
GPIGLSGEKGMKGDHGPPGAAGDKGDKGPTGVPGFPGLDGIPGYPGPPGPRGKPGMSGYN
GSRGDPGFPGGRGALGPEGPPGHPGEKGEKGNSAFILGAIKGIQGDRGDPGLPGLPGSWG
ARGPAGPTGHPGEPGLVGAPGQPGRPGLKGNPGVGVKGQMGDPGEVGQQGSPGPTLLVEP
PDFCLYKGEKGIKGIPGMIGLPGPPGRKGESGIGAKGEKGIPGFPGPQGDPGSYGSPGFP
GLKGELGRVGDPGLFGFLGPKGDPGERGHPGPPGVLVTPPLPLKGPPGDPGFPGRYGETG
DVGLLGPPGLSGRPGEACAGMTGPPGPQGFPGLPGIPGEAGIPGRPDSAPGKPGKPGSPG
LPGAPGLQGLPGSSVTYCSVGNPGPQGIKGKVGPPGGRGSKGEKGNEGLCACEPGPMGPP
GSPGLPGRQGSKGDLGLPGWLGTKGDPGPPGAEGPPGLPGKPGASGRPGNKGAKGDMVVS
RVKGDKGERGPDGPPGFPGQLGLHGQDGRAGEKGDPGPPGDHEDATPGGKGFPGPLGPPG
KAGPVGPPGLGFPGPPGERGHPGVPGRPGVRGPDGLKGQKGDTVSCNVTYPGRPGPPGFD
GPPGPKGFPGPQGAPGRSGSDGHKGRRGTAGTSEIQGPPGFRGDMGDPGFGGERGSSPIG
PPGPPGSPGVNGQKGIPGDPAFGHLGPPGKRGLSGVPGIKGPRGDPGCPGAEGPAGIPGF
PGLKGPKGREGHAGFPGVPGPPGHSCERGAPGIPGQPGLPGDPGSPGAPGEKGQLGDAGP
PGPAGMKGLPGLPGRPGAHGPPGLLGIPGPFGDDGLRGPPGPKGPRGLPGFPGFPGERGK
PGAEGCPGTKGEPGEKGMPGFPGDRGVRGAKGAIGPPGDEGEMAIISKKGKPGEPGSPGD
EGLPGERGDKGTPGMQGRRGEPGRYGPPGFHRGEPGGKGQPGPPGPPGRPGSTGLRGFIG
FPGLPGDQGEPGSPGPPGFSGIDGSRGPKGNTGDPASHFGPPGPKGEPGSPGCPGHFGVP
GEPGLPGIQGPRGSPGRPGPPGSSGSPGCPGDQGIPGLRGQLGEMGDPGLRGLQGDPGIP
GPPGIKGPSGSPGLNGLHGLKGQKGTKGASGLHDVGPPGPVGIPGLKGERGDPGSPGISP
PGPCGEKGPPGPPGRSGPPGPAGATGRPPKDVPDSGPPGDQGPPGPDGPRGAPGPPGPPG
SVDLLRGEPGDCGMPGPPGPPGPPGPPGYKGFPGCDGKDGQKGPMGFPGPQGPHGFPGPP
GEKGLPGPPGRKGPTGLPGPRGAPGPPADTDDCPRIPGLPGVPGLRGPEGAMGLPGMRGP
PGPGCKGEPGLDGRRGVDGIPGSPGPPGDRGDTGEDGCPGGPGPPGPTGDPGPKGLDPGY
LSGFLLVLHSQSDQEPTCPLGMPRLWTGYSLLYLEGQEKAHNQDLGLAGSCLPMFSTLPF
AYCNIHQVCHYAQRNDRSYWLASAAPLPMMPLSEEVIRPYISRCAVCEAPAQAVAVHSQD
QSIPPCPQTWRSLWIGYSFLMHTGAGDQGGGQALMSPGSCLEDFRAAPFLECQGRQGTCH
FFANEYSFWLTTVKADLQFSPAPAPDTLKESQAQRQKTSRCQVCMKYS
NT seq 5187 nt   +upstreamnt  +downstreamnt
atgtatcacctttgtgtggttctgagaagtgacattattatggttgctgtcaaatttttt
gttgatattgggaaaaaacctcaaggggaacacgataataaaagtccatattgccagatg
tctctgcacatggtgctaatgaggtgctctttcagattgaccaaggccttgggcacagac
ccctggtcacttatactcattctcttttctgtacattatgtgtatgggagtggaaagaaa
tacgttggtccttgtggaggaagagattgctctgtttgccattgcattcctgaaaaggga
tctcggggtccaccaggaccaccagggccacagggtccaattgggcccctgggagcccca
ggacccattggactttcaggagagaaaggaatgaaaggggaccacggccctcctggagca
gcaggggacaaaggagataagggtccaactggtgttcctggatttccaggtttagatggc
atacctgggtacccagggcctcctggacccagaggcaaacctggtatgagtggctacaat
ggctctagaggtgacccagggtttccaggaggaagaggagctcttggcccagaaggcccc
cctggccatcctggggaaaagggagaaaaaggaaattcagcgttcattttaggtgccatt
aaaggtattcagggagacagaggggacccaggactgcctggcttaccaggatcttggggt
gcaagaggaccggcaggccccacaggacatcctggagagccagggttagtgggagctcca
ggtcaaccagggcgtccaggtttgaagggaaatcccggtgtgggagtaaaggggcaaatg
ggagacccgggtgaggttggccagcaaggttctcctggacccaccctgttggtagagcca
cctgacttttgtctctataaaggagaaaagggtataaaaggaattcctggaatgattgga
ctgccaggaccaccaggacgcaagggagaatctggtattggggcaaaaggagaaaaaggt
attcctggatttccagggcctcagggggatcctggttcctatggatctccaggttttccg
ggattaaagggagaactaggacgggttggagatcctgggctatttggatttcttggccca
aagggggatcctggagaacgagggcacccaggaccaccaggtgttttggtgactccacct
cttccgctcaaaggtcccccaggggacccagggttccctggccgctatggagaaacaggg
gatgttggactacttggtcccccaggtctctcgggcagaccaggggaagcctgtgcaggc
atgacaggaccccctgggccacaaggatttcctggtcttcctgggattccaggagaagct
ggtattcctgggagacctgattctgctccaggaaaaccagggaagccaggatcacctggc
ctgcctggagcaccaggcctgcagggcctcccaggatcaagtgtgacatactgtagtgtt
gggaaccctggaccacaaggaataaaaggcaaagtgggtcctccaggaggaagaggctca
aaaggagaaaaaggaaatgaaggactctgtgcctgtgagcctggtcccatgggccctcct
ggctctccaggacttcctgggaggcaggggagtaagggagacctggggctccctggctgg
cttggaacaaaaggtgacccaggacctcctggtgctgaaggacctccagggctaccagga
aagcctggtgcctctggtcgacctggcaacaaaggggcaaagggtgacatggtcgtatca
agagttaaaggggacaaaggagaaagaggtcctgatgggcccccaggatttccagggcag
ctgggattacatggtcaggatggacgtgctggagaaaaaggggatccaggacccccaggc
gatcatgaagatgcgaccccaggtggtaaaggatttcctggacctctgggacctccgggc
aaagcaggacctgtggggcccccaggtctgggatttcctggtccaccaggagagcgaggc
cacccaggagttccaggccgcccaggtgtgaggggccctgatggcttgaagggtcagaaa
ggtgacacagtttcttgcaacgtaacctaccccgggaggccaggtcctccaggttttgat
ggacctccaggtccaaagggatttccaggtccccaaggtgcccctgggcggagcggttca
gatgggcataaaggcagacgtggcacagcaggaacatcggaaatacaaggtccacctggt
ttccgtggtgacatgggagatccgggttttggaggggaaagggggtcctcccctattggg
cccccaggccctcccgggtcaccaggagtgaatggtcagaaaggaatcccgggagaccct
gcatttggtcacctgggacccccgggaaaaaggggtctttcaggagtgccagggataaag
ggacccagaggcgatccaggatgtccaggcgctgaagggccagctggcattcctggattc
ccaggtctcaaaggtcccaaaggcagagagggacatgctgggtttccaggtgtcccaggt
ccacctgggcattcctgtgaaagaggtgctccagggataccagggcaaccaggacttcct
ggggatccgggtagtccaggtgctccaggtgagaaaggacagctgggagatgcggggcct
cctggaccagctggaatgaagggtctgcctggactcccaggacgacctggggcacatgga
cccccagggctcctaggaatcccaggtccctttggggatgacgggctacgtggtcctccc
ggtccaaagggaccccgggggctgcctggtttcccaggttttcctggagaaagaggaaag
cctggtgcagagggatgtcctggcacaaagggagaacctggagagaagggcatgcctggc
tttcctggagatcggggagtgagaggggccaaaggagccataggacctcccggagatgaa
ggagaaatggctatcatttccaaaaagggaaaacctggggaacctggatctcctggagat
gagggactcccaggagaaagaggtgataaaggaactcccgggatgcaagggagaagagga
gagccaggaagatatggaccacctggatttcacagaggggaacctggtgggaaaggtcag
ccagggcctcctggacccccaggtcgtccaggctcaactggtttaagagggttcattggt
tttccaggacttccaggtgaccagggtgagccaggttctccaggtcccccaggattttca
ggaattgatggatcaagaggacctaaaggaaacacaggtgaccctgccagtcacttcggt
ccacctggtccaaagggtgagccgggtagccctggatgtccagggcattttggagtaccc
ggagaacctggcttgcctggcattcaagggcccagaggatcacctggaaggccaggacca
cctggctcctctggatcaccgggatgcccaggtgatcaggggattcctggactgagggga
cagctgggagaaatgggagaccctgggctaagaggcctccagggggatccagggatacca
ggtcctccaggaataaaaggtccctccggatcacctggcctaaacggcttgcatggattg
aagggtcagaaaggaaccaaaggtgcttcaggtttgcatgatgtgggcccacctggtcca
gtgggaatacctgggctaaaaggggagagaggagaccctggaagccctggaatctctcct
ccaggtccttgtggagaaaaaggtcctccagggcccccggggagatcagggccacctggt
cctgcaggtgccacaggaagacctcctaaagatgttcctgactcgggcccacctggagat
cagggacctcctggtcctgatggcccaagaggagcacctgggcctccaggcccccctggg
agtgttgaccttctgaggggggagccaggtgactgcggcatgccagggccaccaggtccc
cccggcccaccaggccctccaggatacaaaggctttccaggatgtgatggaaaagatggc
cagaaaggaccaatgggattcccagggccacagggaccacatggatttcctgggccacct
ggagagaagggtttacctggacctccagggaggaaagggcccactggtcttccaggtccc
agaggtgcaccggggccacctgccgacacggatgactgtccccgaatcccagggcttcct
ggggtaccaggcttgagaggaccagaaggagccatggggctccctggaatgagaggcccc
ccaggaccagggtgcaaaggagagcctgggctggatggcaggaggggtgtggatggcatc
cctgggtctcctgggcctcccggagacagaggtgacaccggagaagacggctgccctgga
ggaccagggcctcctggtcctactggggatccggggcccaaagggcttgaccctggatac
cttagtggcttcctcctggttctccacagtcagtcggaccaggagcccacctgccccctg
ggcatgcccaggctctggactgggtacagcctgttatacctggaagggcaagagaaagct
cacaatcaagaccttggtctggcagggtcttgccttcccatgttcagcacgctgcctttt
gcctactgcaacatccaccaggtgtgccactatgcccagagaaacgacagatcctactgg
ctggccagtgctgcacccctccccatgatgccactctctgaagaggtgatccgcccctac
atcagtcgctgtgcggtatgtgaggccccggctcaggcagtggcagtgcacagccaggac
cagtccatcccgccatgtccacagacctggaggagcctctggattggatattcattcctg
atgcacacaggagctggggaccaaggaggagggcaggccctcatgtcacccggcagctgc
ctggaagatttcagagcagcaccattccttgaatgccaaggccggcagggaacttgccac
ttttttgcaaatgagtatagtttctggctaacaacggtgaaagcagacttgcaattttcc
cctgctccagcaccagacaccttaaaagaaagccaggcccaacgccagaaaaccagccgg
tgccaggtctgcatgaaatatagctag

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