Callithrix jacchus (white-tufted-ear marmoset): 100388470
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Entry
100388470 CDS
T03264
Symbol
GARS1
Name
(RefSeq) glycine--tRNA ligase isoform X1
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100388470 (GARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cjc01007
]
100388470 (GARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjc03016
]
100388470 (GARS1)
03029 Mitochondrial biogenesis [BR:
cjc03029
]
100388470 (GARS1)
Enzymes [BR:
cjc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
100388470 (GARS1)
Amino acid related enzymes [BR:
cjc01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
100388470 (GARS1)
Transfer RNA biogenesis [BR:
cjc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100388470 (GARS1)
Mitochondrial biogenesis [BR:
cjc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
100388470 (GARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
100388470
NCBI-ProteinID:
XP_054093099
Ensembl:
ENSCJAG00000008595
UniProt:
F7DB26
LinkDB
All DBs
Position
8:complement(24921123..24960249)
Genome browser
AA seq
739 aa
AA seq
DB search
MPTPRSALLKAARACLLLLLPPRLSARSSLPLRRPLSAPSGAPISFPAAASQSSMDGAGA
EEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALQPKDDIVD
RAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQAWRQHFIQEEQILEIDC
TMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSAEKKSEME
SVLAQLDNYGQQELGDLFVNYNVKSPITGNDLSPPVAFNLMFKTFIGPGGNMPGYLRPET
AQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEK
DHPKFQNVADLHLYLYSAKAQVSGESARKMRLGDAVEQGVINNTVLGYFIGRIYLYLTKV
GISPDKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLSCHSRATKVPL
VAEKPLKEPKTVNVVQFEPSKGAIGKAYKKDAKLVMEYLAICDECYITEMEMLLNEKGEF
TVETEGKTFQLTKDMVNVKRFQKTLYVEEIVPNVIEPSFGLGRIMYTVFEHTFHVREGDE
QRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGVSHKVDDSSGSIGRRYAR
TDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEVSELPSIVRDLANGSITWADVE
ARYPLFEGQETSKKETIEE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcccactccgcgctcggcgttgcttaaagctgctcgcgcctgtctgctgctactgctg
ccgccccggctctcggcccgatcctcgctcccgctccgccggcccctcagcgcgccctcc
ggcgccccaatctccttccccgccgccgcctctcagagcagcatggacggcgcgggggct
gaggaggtgctggcacctctcaggctagccgtgcgccagcagggagatcttgtgcgaaaa
ctcaaagaagataaagcaccccaagtagatgtagacaaagcagtggctgagctcaaagcc
cggaagagggttctggaagcaaaggagctggcattacagcccaaagatgatattgtagac
cgagcaaaaatggaagataccctgaagaggaggtttttctatgatcaagcttttgctatt
tatggaggtgttagtggtctgtatgactttgggccagttggatgtgctttgaagaacaat
attattcaggcctggaggcagcactttatccaagaggaacagatcctggagattgattgc
accatgctcacccctgagccagttttaaagacctctggccatgtagacaaatttgctgac
ttcatggtgaaagatgtaaaaaatggagaatgttttcgtgctgaccatctattaaaagct
catttacagaaattgatgtctgataagaagtgttctgctgaaaagaaatcagagatggaa
agtgttttggcccagcttgataactatggacagcaagaacttggggatctttttgtgaac
tataatgtaaaatctcccattactggaaatgatctatcccctccagtagcttttaactta
atgttcaagactttcattgggcctggaggaaacatgcctgggtacttgagaccagaaact
gcacaggggattttcttgaatttcaaacgactgttggaattcaaccaaggaaagttgcct
tttgctgctgctcagattggaaattcttttagaaatgagatctcccctcgatctggactg
atcagagtcagagaattcacaatggcagaaattgagcactttgtagatcccagtgagaaa
gaccaccccaagtttcagaatgtggcagaccttcacctttatttgtattcagcaaaagct
caggtcagcggagagtctgctcggaaaatgcgcctgggagatgctgttgaacagggagtg
attaataacacagtattaggctatttcatcggccgcatctacctctacctcacgaaggtt
ggaatatctccagataaactccgtttccggcagcacatggagaatgagatggcccattac
gcctgtgactgttgggatgcagaatccaaaacatcctatggttggattgagattgttgga
tgtgctgatcgttcctgttatgacctctcctgtcattcacgagccaccaaagtcccactt
gtagctgagaaacctctgaaggaacccaaaactgtcaatgttgttcagtttgaacccagc
aagggagcaattggtaaggcgtataagaaggatgcaaaactagtgatggagtatcttgcc
atttgtgatgagtgctacattacagaaatggagatgctgctgaatgagaaaggggaattt
acagttgaaactgaagggaaaacatttcagttaacaaaagacatggtcaatgtgaagaga
ttccagaaaacactatatgtggaagaaattgttccgaatgtaattgaaccttcctttggc
ctgggcaggatcatgtacacggtatttgaacatacattccatgtacgagaaggagatgaa
cagagaacattcttcagtttccctgccgtagtcgctccattcaaatgttccgtcctccca
ctgagccaaaaccaggaattcatgccatttgtcaaggaattatcggaagccctgacccgg
cacggagtgtctcacaaagtagatgattcctctgggtcaattggaaggcgctatgccagg
actgatgagattggtgtggcttttggtgtcaccattgactttgacacggtgaacaagacc
ccccacactgcaactctgagggaccgtgactcaatgcggcagataagagcagaggtctct
gagctgccgagtatagtccgagacctggccaatggcagcatcacatgggccgatgtggag
gccaggtatcctctgtttgaagggcaagagactagtaaaaaagagacaatcgaggaatga
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integrated database retrieval system
