KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100388628
Entry
100388628         CDS       T03264                                 
Symbol
PDGFB
Name
(RefSeq) platelet-derived growth factor subunit B isoform X1
  KO
K17386  platelet-derived growth factor subunit B
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc01521  EGFR tyrosine kinase inhibitor resistance
cjc04010  MAPK signaling pathway
cjc04014  Ras signaling pathway
cjc04015  Rap1 signaling pathway
cjc04020  Calcium signaling pathway
cjc04072  Phospholipase D signaling pathway
cjc04151  PI3K-Akt signaling pathway
cjc04510  Focal adhesion
cjc04518  Integrin signaling
cjc04540  Gap junction
cjc04630  JAK-STAT signaling pathway
cjc04810  Regulation of actin cytoskeleton
cjc05167  Kaposi sarcoma-associated herpesvirus infection
cjc05200  Pathways in cancer
cjc05206  MicroRNAs in cancer
cjc05211  Renal cell carcinoma
cjc05214  Glioma
cjc05215  Prostate cancer
cjc05218  Melanoma
cjc05231  Choline metabolism in cancer
cjc05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    100388628 (PDGFB)
   04014 Ras signaling pathway
    100388628 (PDGFB)
   04015 Rap1 signaling pathway
    100388628 (PDGFB)
   04630 JAK-STAT signaling pathway
    100388628 (PDGFB)
   04020 Calcium signaling pathway
    100388628 (PDGFB)
   04072 Phospholipase D signaling pathway
    100388628 (PDGFB)
   04151 PI3K-Akt signaling pathway
    100388628 (PDGFB)
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    100388628 (PDGFB)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100388628 (PDGFB)
   04540 Gap junction
    100388628 (PDGFB)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    100388628 (PDGFB)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100388628 (PDGFB)
   05206 MicroRNAs in cancer
    100388628 (PDGFB)
   05231 Choline metabolism in cancer
    100388628 (PDGFB)
  09162 Cancer: specific types
   05214 Glioma
    100388628 (PDGFB)
   05218 Melanoma
    100388628 (PDGFB)
   05211 Renal cell carcinoma
    100388628 (PDGFB)
   05215 Prostate cancer
    100388628 (PDGFB)
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    100388628 (PDGFB)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    100388628 (PDGFB)
  09176 Drug resistance: antineoplastic
   01521 EGFR tyrosine kinase inhibitor resistance
    100388628 (PDGFB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:cjc04052]
    100388628 (PDGFB)
   00536 Glycosaminoglycan binding proteins [BR:cjc00536]
    100388628 (PDGFB)
Cytokines and neuropeptides [BR:cjc04052]
 Cytokines
  Growth factors (RTK binding)
   100388628 (PDGFB)
Glycosaminoglycan binding proteins [BR:cjc00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   100388628 (PDGFB)
SSDB
Motif
Pfam: PDGF PDGF_N Col-Pyo_DNase PDZ_6
Other DBs
NCBI-GeneID: 100388628
NCBI-ProteinID: XP_008977678
Ensembl: ENSCJAG00000011366
UniProt: A0A2R8MRM1
LinkDB
Position
1:complement(207340458..207361078)
AA seq 241 aa
MNRCWALFLSLCCYLRLVSAEGDPIPEELYEMLSGRSIRSFDDLQRLLQGDSGEEDGAEL
DLNMTRSHSGGELESLARGRRSLGSLSVAEPAMIAECKTRTEVFEISRRLIDRTNANFLV
WPPCVEVQRCSGCCNNRNVQCRPTQVQLRPVQVRKIEIVRKKPIFKKATVTLEDHLACKC
ETVTAARPVTRSPGSSQEQRAKTPQTRVTIRTVRVRRPPKGKHRKFKHTHDKAALKETLG
A
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaatcgctgctgggcgctcttcctgtctctctgctgctacctgcgtctggtcagcgcc
gagggggaccccattcctgaggagctctatgagatgctgagtggccgctccatccgatcc
tttgacgacctccagcgcctgctgcagggagactccggagaggaagatggggctgagctg
gacctgaacatgacccgctcacattctggaggcgagctggagagcttggctcgtgggaga
aggagcctgggttccctgagcgttgccgagccagccatgatcgccgagtgcaagacgcgc
actgaggtgttcgagatctcccggcgcctcattgaccgcaccaatgccaacttcctggtg
tggcctccctgcgtggaggtgcagcgctgctctggctgttgcaacaaccgcaacgtgcaa
tgccggcccacccaggtgcagctgcgaccagtccaggtgagaaagatcgagattgtgcgg
aagaagccaatctttaaaaaggccacggtgacgctggaggaccacctggcatgcaagtgt
gagacagtgacggctgcacggcctgtgacccgaagcccggggagttcccaggagcagcga
gccaaaacgccccaaactcgggtgaccatccggacggtgagagtccgccggccccccaaa
ggcaagcaccggaaattcaagcacacgcatgacaaggcggcactgaaggagaccctcgga
gcctag

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