Callithrix jacchus (white-tufted-ear marmoset): 100388771
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Entry
100388771 CDS
T03264
Symbol
POP1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1 isoform X2
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100388771 (POP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjc03009
]
100388771 (POP1)
03016 Transfer RNA biogenesis [BR:
cjc03016
]
100388771 (POP1)
03029 Mitochondrial biogenesis [BR:
cjc03029
]
100388771 (POP1)
Enzymes [BR:
cjc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
100388771 (POP1)
Ribosome biogenesis [BR:
cjc03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
100388771 (POP1)
Transfer RNA biogenesis [BR:
cjc03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
100388771 (POP1)
Mitochondrial biogenesis [BR:
cjc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
100388771 (POP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
100388771
NCBI-ProteinID:
XP_008981675
Ensembl:
ENSCJAG00000015567
UniProt:
F6UEY1
LinkDB
All DBs
Position
16:complement(96902126..96945091)
Genome browser
AA seq
1024 aa
AA seq
DB search
MSNAKERKHAKKMRNQPTNVTLSSGFVADRGVKHHNGGGKPFQAQKQEPHPGTSRQWQTR
VNPHSLPDPDVSEQSSSKVMFRKKGGWKAGPEGTSQEIPKYITASTFAQARAAEIRAMLK
AVTQKSSNSLVFQTLPRHMRRRAMSHNVKRLPRRLQEIAQKEAEKAVHQKKEHSKNKCHK
ARRCHMNRTLEFNRRQKKNIWLETHIWHAKRFHMVKKWGYCLGERPTVKSHRACYRAMTN
RCLLQDLSYYCCLELKGKEEEILKALSGMCSIDTGLTFAAVHCLSGKRQGSLVLYRANKY
PRETLGPVTFIWKSQRTPGDTSESRQLWIWLHPTLKQDILEEIKAVCQCVEPIKSVVCIT
DPLLTPSQEKSQTELPDEKIGKKRKRKDDRENAQPIKKIIGDGTRDPSLPYSWISPATGI
IISDLTMEINRFRLIGPLSHSILIEAIKAASVHTVGEDTEETPHHWWIETCKDPDSVSLH
YRQEAVFELLGGITSPAEVPTGTILGLTVGDPRINLPPKKSKALPNPEKCQDNEKVRQLL
LEGVPVECTHSFIWNQDICKSVTENKISDQDLNRMRSELLVPGSQLILGPHESKIPILLI
QQPGKVTGEDRLGWGSGWDVLLPKGWGMAFWIPFIYRGARVGGLKQSAVHSQYKRSPSVP
GDFPDCPAGMLFAEEQAKNLLEKYKRRPPAKRPNYVKLGTLAPFFCPWEQLTQDWELRGQ
AHEEPSVASSPNGKESDLRRSEMPCALMPKKTPQPSDEVGTSIDHPRKAEEVMNAGCQEP
VGPESITDQEASENHVAATGSQLCVLRSRKLLKQLSAWCGPSSEDSRAARRAPCRAQQGL
TREACLSILGHFPRALVWVSLSLLSRGSPEPHTMICIPAKEDFLQLCKDWRYCGPQESKH
SDPFKNKILKQKEKKKREKRQKLGHTSSHGLAGEEPVAGQEALTLGLWSGPLPRVTLHCS
RTLLGFVTQGDFSMAVGCGEALGFVSLTGLLDMLSSQPAAQRGLVLLRPPASLQYRFARI
AIEV
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatgcaaaagaaagaaaacatgctaagaaaatgagaaaccagcccaccaatgtg
actctgtcctctggctttgtggctgacagaggcgtaaagcaccacaatggaggtggaaaa
cctttccaagctcaaaaacaagagcctcatcctggaacttcacgacagtggcaaaccaga
gtcaacccccattctctgcctgaccctgatgtgagtgagcagtcttcctccaaagtgatg
tttagaaaaaagggaggatggaaagcaggtcccgagggtacatctcaggagatccccaag
tatataactgcttctacttttgctcaagcacgagctgctgaaatccgtgctatgttaaaa
gctgtgacccagaagtcttcgaattcactggttttccagactctgccacggcacatgcga
cgaagagccatgagccacaatgtcaaacgccttcccagacggttacaggagattgcccag
aaagaggcggagaaagccgtacatcagaaaaaagaacattcaaaaaataaatgccataaa
gctcgaagatgtcacatgaaccggacgctagaatttaaccgtagacaaaagaagaacatt
tggttagaaactcacatctggcacgccaagcggtttcacatggtcaagaagtggggctac
tgccttggggagaggccgacggtcaagagccacagagcctgctatcgagccatgaccaac
cggtgcctcctgcaggatttatcctactactgttgtttggagctgaagggcaaagaggaa
gaaatactaaaggcactttctggaatgtgtagcatagacacagggctgacgtttgcagca
gttcattgcttgtctggaaaacgacaagggagccttgtgctttatcgggcaaataaatat
cccagagaaacgctcgggcctgtgacatttatctggaagtcccagaggacccctggtgac
acttctgagagcaggcagctgtggatctggcttcatccaacccttaaacaggatatctta
gaggaaataaaagcagtgtgccagtgtgtggaacccatcaaatcagttgtctgcatcact
gacccacttctgacaccatcccaagaaaaaagccaaactgaattgcctgatgagaaaatt
ggcaagaaaagaaaaaggaaagatgacagagaaaatgctcaaccgattaaaaaaattatt
ggtgatggaactagagatccaagcctaccatactcttggatctctccagccacgggcatt
ataatcagtgatttgacgatggagatcaacagattccggctgattgggccactttcccac
tccatcctaattgaagcaataaaagctgcttctgtccacactgtgggagaggacacagag
gagacacctcaccactggtggatagaaacctgtaaggatcctgacagcgtttcccttcat
tacagacaagaagccgttttcgagttgttgggaggaataacatcaccagcagaagttccg
acaggtactattctgggactgacagttggggatcctcgaataaatttgcctccaaagaag
tccaaagctttgcccaatccagaaaaatgccaagataatgagaaagttagacagctgctt
ctggagggtgtgcctgtggaatgtacgcatagctttatctggaaccaagatatctgtaag
agtgtcacagagaataaaatctcggatcaggatttaaaccggatgaggagtgaattgctg
gtgcctgggtcacagcttattttaggtccccatgaatccaagatacctatacttttgatt
cagcagccaggaaaagtgaccggtgaagaccgactaggctggggaagtggctgggatgtc
ctgcttccaaagggctggggcatggctttctggattccatttatctatcgaggtgcaaga
gttggaggattgaaacagtctgcagtacattctcagtataagaggtcgcctagtgtccca
ggtgattttccagactgccctgctgggatgctgtttgcagaagagcaagctaagaatctt
cttgaaaaatataaaagacgccctcctgcaaaacggcccaactacgttaagcttggcact
ctggcacctttcttctgcccctgggagcagttaactcaagactgggagttaagaggccag
gcccatgaagaaccttctgtagcttcatctccaaatggtaaggagagtgacttaagaaga
tctgagatgccttgtgctctcatgccaaagaaaactcctcagccatctgatgaagtgggc
acatccatagatcaccccaggaaggccgaggaggtaatgaacgcagggtgtcaagaacca
gtggggcctgagagcatcacagaccaggaggccagtgaaaaccatgttgctgccacaggg
agtcaactctgcgttctcaggagtagaaaattactgaagcaactgtcagcctggtgtggg
cccagttctgaggatagtcgggcagcccggcgagctccctgcagagcccagcaagggttg
accagagaggcctgcctgtccatcttgggccacttccccagggccctggtgtgggtcagc
ctgtccctgctcagcagaggcagccctgagcctcacaccatgatctgcatccctgccaag
gaggacttcctccagctctgtaaggactggcgctactgtgggccccaggaatccaaacac
agtgacccattcaagaacaagatcctgaaacagaaagagaagaagaaaagggagaagcgg
cagaagctgggacatacctcttctcatggcctggcaggggaagagcccgtggctgggcag
gaagctctgactctggggctgtggtcaggccctctgccgcgtgtgacgttgcactgctcc
agaactctgctaggctttgtgactcagggagatttttccatggctgttggctgtggagaa
gccctgggctttgttagcttgacaggcttgctggatatgctgtccagccagccagcggcc
cagaggggtttagtgctgctgaggcctcccgcgtctctgcagtatcgatttgcaaggatt
gctattgaggtgtga
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integrated database retrieval system
