Callithrix jacchus (white-tufted-ear marmoset): 100388973
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Entry
100388973 CDS
T03264
Symbol
MYOF
Name
(RefSeq) myoferlin isoform X2
KO
K22125
myoferlin
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100388973 (MYOF)
Membrane trafficking [BR:
cjc04131
]
Endosome - Lysosome transport
Others
Ferlins
100388973 (MYOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
NagJ_C
Motif
Other DBs
NCBI-GeneID:
100388973
NCBI-ProteinID:
XP_002756458
Ensembl:
ENSCJAG00000008827
LinkDB
All DBs
Position
12:complement(82690042..82878796)
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AA seq
2048 aa
AA seq
DB search
MLRVIVESANNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLD
FSSSLGIIVKDFETIGQNKLIGTATVVLKDLIGDQSRSLPYKLISLLNERGQDTGATIDL
VIGYDPPSTPHPNDPSGPSVPGMGGDGEEDEGDEDRLDNAVRAPGPKGPVGTMSEAQLAR
RLTKVKNSRWMLSNKPQDFQIRVRVIEGRQLSGNNIRPVVKVHVCGQTHRTRIKRGNNPF
FDELLFYNVNMTPSELMDETISIRVYNSHSLRADCLMGEFKIDVGFVYDEPGHAVMRKWL
LLNDPEDASSGSKGYIKVSMFVLGTGDEPPPERRDRDNDSDDVESNLLLPAGIALRWVTF
LLKIYRAEDIPQMDDAFSQTVKEIFGGNADKKNLVDPFVEVSFAGKKVCTNIIEKNANPE
WNQVVNLQIKFPSVCEKIKLTIYDWDRLTKNDIVGTTYLHLSKIAASGGEVEVNTGETEV
GFVPTFGPCYLNLYGSPREYTGFPDPYDELNTGKGEGVAYRGRILVELTTFLEKTPPDKK
LEPISNDDLLVVEKYQRRRKYSLSAVFHSATMLQDVGEAIQFEVSIGNYGNKFDTTCKPL
ASTTQYSRAVFDGNFYYYLPWAHTKPVVTLTSYWEDISHRLDAVNILLVMAERLQSNISA
LKSGIQSKIPANQLAELWLKLIDEVIEDTRYTLPLTEGKANVTVLDTQIRKLRSRSLSQI
HEAAVRMRSEATDVKSTLAEIEDWLDKLMQLTEEPQNSMPDIIIWMIRGEKRLAYARIPA
HQVLYSTSGENASGKYCGKTQTIFLKYPQEKNNGLKVPVELRVNIWLGLSAVEKKFNSFA
EGTFTVFAEMYENQALMFGKWGTSGLVGRHKFSDVTGKIKLKREFFLPPKGWEWEGDWIV
DPERSLLTEADAGHTEFTDEVYQNETRYPGGDWKPAEDTYTDANGDKAASPSELTCPPGW
EWEDDAWSYDINRAVDEKGWEYGITIPPDHKPKSWVAAEKMYHTHRRRRLVRKRRKDLTQ
TASSTAKAMEELEDQEGWEYASLIGWKFHWKQRSSDTFRRRRWRRKMAPSETHGAAAIFK
LEGALGADTTEDGDEKTVEKQKHSATTVFGANTPIVSCNFDRVYIYHLRCYVYQARNLLA
LDKDSFSDPYAHVSFLHRSKTTEIIRSTLNPTWDQTIIFDEVEIYGEPQTILQNPPKVIM
ELFDSDQVGKDEFLGRSIFSPLVKLNSEMDIAPKLLWHPVMNGDKACGDVLVTAELILRD
RDGSNLPILPPQRAPNLYMVPQGIRPVVQLTAIEILAWGLRNMKNFQMASITSPSLVVEC
GGERVESVVIKNLKKTPNFPSSVLFMKVFLPKEELYMPPLVIKVIDHRQFGRKPVVGQCT
IDRLDRFRCDPYAAKQDIVPQLKASLLSAPPCRDVVIEMEDTKPLLASKLTEKEEEIMDW
WSKFYASSGEHEKCGQYIQKGYSKLKIYDCELENVAEFEGLTDFSDTFKLYRGKSDDNED
PSVVGEFKGSFRIYPLPDDPSVPAPPRQFRELPDSVPQECTVRIYIVRGLELQPQDNNGL
CDPYIKITLGRKVIEDRDHYIPNTLNPVFGRMYELSCYLPQEKDLKISVYDYDTFTRDEK
VGETIIDLENRFLSRFGSHCGIPEQYCTSGVNTWRDQLRPTQLLQNVARFKGFLSPILSE
DGSRIRYGGRDYSLDEFEANKILHQHLGAPEERLALHILRTQGLVPEHVETRTLHSTFQP
NISQGKLQMWVDVFPKSLGPPGPPFNITPRKAKKYYLRVIIWNTKDVILDEKSITGEEMS
DIYVKGWIPGNEENKQKTDVHYRSLDGEGNFNWRFVFPFDYLPAEQLCIVAKKEHFWSID
QTEFRVPPRLIIQIWDNDKFSLDDYLGFLELDLHHTIIPAKSPQKCSLDMIPDLKAMDPL
KAKTASLFEQKSMKGWWPCYAEKDGSRVMAGKVEMTLEILNEKEADERPAGKGRDEPNMN
PKLDFPNRPETSFLWFTNPCKTMKFIVWRRFKWVIIGLLFLLILLLFVAVLLYSLPNYLS
MKIIKPNA
NT seq
6147 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgggtgattgtggaatctgccaataatatccctaaaacgaaatttggaaagccg
gatcctattgtttctgttatttttaaggatgagaaaaagaaaacaaagaaagttgataat
gaattgaaccctgtctggaatgagattttggagtttgacttgaggggtattccgttggac
ttttcatcttcccttgggattattgtgaaagattttgagacaattggacaaaataaatta
attggcacggccactgtagtcttgaaggacctgattggtgaccagagcagatccctgcca
tacaagttgatctccctgctaaatgaaagggggcaggatactggggccaccattgacttg
gtgatcggctatgatccgccttctactccacatccaaatgacccaagtgggcccagcgtg
ccaggcatgggaggagacggggaagaagatgaaggtgatgaagacaggttggacaatgca
gtcagggcccctgggcccaaggggccagttgggacgatgtcagaagctcagcttgctcgg
aggctcaccaaagtaaagaacagcaggtggatgctgtccaataagccacaggacttccag
atccgcgtccgagtgattgagggccgacaattaagcggcaacaacataagacctgtggtc
aaagttcatgtctgcggccagacacaccgaacaagaatcaagagaggaaacaacccgttt
tttgatgagttgcttttctacaatgtcaacatgaccccgtctgaattgatggatgagacc
atcagcatccgggtttataattctcactctctgagagcagattgtctgatgggggaattt
aagattgatgttggatttgtttatgatgaacctggccatgctgtcatgagaaagtggctt
cttctcaatgacccagaagatgccagttcaggttctaaaggttatatcaaagtcagcatg
tttgtcctgggaaccggagatgagcctccccctgagagacgagatcgtgataatgacagt
gatgatgtggagagcaatttgttactccccgctggcatcgccctccggtgggtgaccttc
ttgctgaaaatttaccgagctgaggacatcccccagatggatgacgccttctcgcagaca
gtaaaggaaatatttggaggcaatgcagataagaaaaatcttgtggatccttttgtagaa
gtttcctttgctggaaaaaaggtttgtacaaacataattgagaaaaatgcaaaccctgag
tggaatcaggtcgtcaatcttcagatcaagtttccttcagtgtgtgaaaaaataaaacta
acaatatatgactgggaccgtcttactaaaaatgatatagttggaacaacgtatctacac
ctgtctaaaattgctgcctctggtggggaagtggaagtaaacacgggagaaacagaggta
ggctttgttccaacatttggaccttgttatctgaatctttatggaagccccagagagtac
acaggattcccagacccctatgatgagctgaatactggaaagggggaaggagttgcctac
agaggcaggatcttggttgaattaaccacttttcttgagaagacaccaccagataaaaag
cttgagcccatttccaatgatgacctgctggttgttgagaaataccagcgacggcggaag
tacagcctgtctgctgtgtttcattcagccaccatgttgcaagatgtgggtgaggccatt
cagtttgaagtcagcattgggaactatggcaacaagtttgacaccacctgtaagcctttg
gcatccacaactcaatacagccgtgctgtatttgatgggaacttctattactacttgcct
tgggcccacaccaagccagttgttaccctgacttcatactgggaggatattagtcatcgc
ctggatgctgtgaacattctcctagttatggcagaacggctgcaatcaaatatatcagct
ctaaaatcagggatacaaagtaaaattcctgcaaaccagctggctgaattgtggttgaag
ctgatagatgaagttatagaagacacaagatatacactgcctctcacagaaggaaaagcc
aatgtcacagttctcgatactcagatccgaaagctgcggtccagatctctctcccaaata
catgaggcagctgtgaggatgaggtcggaagccacagatgtgaagtccacactggcagaa
attgaggactggcttgataaattaatgcagctgaccgaagagccacagaacagcatgcct
gacatcatcatctggatgatccggggagagaagagactggcctatgcacgaattcccgcg
catcaggtcttatactccaccagtggtgagaatgcatctggaaaatactgtggaaaaacc
caaaccatctttctcaagtatccgcaggagaaaaacaacgggctaaaggtgcctgtggag
ttgcgagtgaacatctggctaggcttaagtgctgtggagaagaagtttaacagctttgca
gaaggaactttcactgtgtttgctgaaatgtatgaaaatcaagctctcatgtttggaaaa
tggggcacttctggattagtaggacgtcataaattttctgatgtcacaggaaaaataaag
cttaagagggaattttttctgcctccaaaaggctgggaatgggaaggagactggatagtt
gatcctgaaagaagcttgctgactgaggcggatgcaggtcacacggagtttaccgatgaa
gtctatcagaatgagacccgctaccccgggggtgactggaagccagccgaggacacctac
acagatgcgaacggcgataaagcagcatcacccagtgagttgacttgtcctccaggttgg
gaatgggaggatgatgcgtggtcatatgacataaatcgagcggtggatgagaaaggctgg
gaatatggaatcaccattcctcctgatcataagcccaaatcctgggttgcagcagagaaa
atgtaccatactcatagacggcgaaggctggtccgaaaacgcaggaaagatttaacacag
acggcttcaagcaccgcgaaggccatggaggaattggaagaccaagaaggttgggaatac
gcttctttaattggctggaaatttcactggaagcaacgaagttcagatacctttcgccgc
agacgctggaggagaaaaatggctccttcagaaacacatggtgcagctgccatctttaaa
cttgaaggtgcccttggggcagacactacggaagatggggatgagaagactgtggagaag
cagaagcacagcgccaccactgtgttcggagcaaacactcccattgtttcctgcaatttt
gacagagtttacatctaccatctgcgctgctatgtctatcaagccagaaacctcctggct
ttagacaaggatagcttttcagatccgtatgctcatgtctctttcctacatcggagcaaa
accactgagatcatccgttcaaccctgaatcccacgtgggaccaaacaattatattcgat
gaagttgaaatctatggggaacctcagacaattctacagaatccacccaaagtgatcatg
gaactttttgacagtgaccaagtgggcaaagatgaatttttaggacgaagcatcttctct
cctctggtgaaactgaactcagaaatggacatcgcacccaaacttctctggcacccagta
atgaatggagacaaagcctgtggagatgttcttgtcactgcagagctgattctgagggac
agggatggctccaaccttcccattcttccccctcaaagggcaccaaatctgtacatggtc
ccccaggggatcaggcctgtggtccagctcactgccattgagattctagcctggggctta
agaaatatgaaaaacttccagatggcttctatcacatcccccagccttgtcgtggagtgt
ggaggagaaagggtagaatcggtggtcatcaaaaaccttaagaagacacccaactttcca
agttctgttctcttcatgaaagtgttcttgcccaaggaggaattatacatgcccccgctg
gtgatcaaggtcatcgaccacaggcagtttgggcggaagcctgtcgtcggccagtgcacc
atcgaccgcctggaccgctttcgctgcgacccttatgcagcgaaacaggatattgtccca
cagctcaaagcctcccttctgtctgccccaccatgccgggacgtcgttattgaaatggaa
gacaccaaaccattactggcttctaagctgacagagaaggaggaagaaatcatggactgg
tggagtaaattctatgcttcctcaggggaacatgaaaaatgcggacagtatattcagaaa
ggctattccaagctcaagatatatgattgcgaactagaaaacgtagcagaatttgagggc
ctgacagacttctcagatacgttcaagttgtaccgaggcaaatcggatgacaatgaagat
ccttctgtggtcggagagtttaagggttcctttcggatctaccctctgccggatgacccc
agcgtgccagcccctcccagacagtttcgggaattacctgacagcgtcccacaggaatgc
acggttaggatttacattgttcgaggcttagagctccagccccaggacaacaatggcctg
tgtgacccttacataaaaataacactgggcagaaaagtcattgaagaccgagatcactac
attcccaacactctcaacccagtctttggcaggatgtacgaactgagctgctacttacct
caagaaaaagacctgaaaatttctgtctatgattatgacacctttacccgggatgaaaaa
gtaggagaaacaattattgatctggaaaaccgattcctttcccgctttgggtcccactgc
ggcataccagagcagtactgcacttctggagtcaatacctggcgagatcaactgagaccg
acacagctgcttcaaaatgtcgccagattcaaaggcttcctatcacccatcctttccgaa
gatgggagtagaatcagatatggaggacgagactacagtttggatgaatttgaagccaac
aaaatcctgcaccagcacctcggggcccctgaagagcgccttgctcttcacatcctcagg
actcaggggctggtccctgagcacgtggaaacaaggactttgcacagcaccttccagccc
aacatctcccaggggaaacttcagatgtgggtggatgttttccccaagagtttggggcca
ccaggccctcctttcaacatcacaccccggaaagccaagaaatactacctgcgtgtgatc
atctggaacaccaaggatgtcatcttggatgagaaaagtatcacaggagaggaaatgagc
gacatctacgtcaaaggctggattcctggcaatgaagaaaacaaacagaaaacagatgtc
cattacaggtccttggatggcgaagggaattttaactggagatttgttttcccgtttgac
taccttccagctgaacaactctgcatcgttgcaaaaaaagagcatttctggagtattgac
caaacagagtttcgagtcccacccagactgatcattcagatatgggacaatgacaagttt
tccctggatgactacttgggtttcctagaacttgatttgcatcacacaattattccagca
aaatcaccacagaaatgcagtttggacatgattcctgacctcaaagccatggaccccctt
aaagccaagacggcctccctctttgagcagaagtccatgaaaggatggtggccatgctac
gcagagaaagatggctcccgcgtgatggctgggaaagtggagatgacattggaaatcctc
aacgagaaggaggccgacgagaggccagccgggaaggggcgggatgaacccaacatgaac
cccaagctggacttcccaaaccgaccagaaacctccttcctctggttcaccaacccgtgc
aagaccatgaagttcattgtgtggcgacgctttaagtgggtcatcatcggcctgctgttc
ctgctcatcctgctgctgttcgtggccgtgctcctctactccctgccgaactatttgtca
atgaagattataaagccaaatgcataa
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integrated database retrieval system
