Callithrix jacchus (white-tufted-ear marmoset): 100389025
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Entry
100389025 CDS
T03264
Symbol
IRX6
Name
(RefSeq) iroquois-class homeodomain protein IRX-6 isoform X2
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100389025 (IRX6)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
100389025 (IRX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Prothymosin
Motif
Other DBs
NCBI-GeneID:
100389025
NCBI-ProteinID:
XP_002761004
Ensembl:
ENSCJAG00000012962
LinkDB
All DBs
Position
20:9890108..9896885
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AA seq
448 aa
AA seq
DB search
MSFPHFGHPYSGASQFLVSASSSTTCCESTPRSVSDMASGSTPAPALCCAPYDSRLLGNA
RPELGAALGIYGAPYAAAAAAQSYSGYLPYSPEPPALYGALNPQYEFKEAAGSFTPGLAQ
PGAYYPYERTLGQYQYDRYGAVELSGAGRRKNATRETTSTLKAWLNEHRKNPYPTKGEKI
MLAIITKMTLTQVSTWFANARRRLKKENKMTWAPKNKGGEERKAEGREEDSLGCLNADTK
DVTPSQEARGLRLSDLEDLEEEEEEEEEEEEPEDEEAMATAADRLAEFSKGAQSLPGFCA
AAREGRLERRECGLAAPRFSFNEPSGSEEADFLVEEPGGSRLTMHYPCVEKPRIWSLAHT
AAASSVEGAPPTRPRPRSPECHMITGQPPASARRLAVPRDSACNESSCIAKAFGNPRFAL
QGLPLNCAPCPRRSEPAVHCQYSSGAEG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccgcactttggacacccgtacagcggcgcttcccagtttctggtgtctgca
agttccagcaccacatgctgcgaatccaccccacgctcagtctcagatatggcatcaggc
tccaccccggcgcccgctctctgctgcgcaccctacgatagtcggctgctgggcaatgcg
cgaccggagctgggcgccgccttgggcatctatggagccccctacgcagccgctgcagct
gcccaaagctactctggctacctgccctatagcccagagccgcccgcactgtatggggca
ctgaatccacagtatgaatttaaggaggctgcagggagttttacacccggcctggcacaa
ccaggagcctattatccctatgagcggactctggggcagtaccaatatgaccggtatggg
gcagtggaattgagtggtgcaggtcgcagaaagaacgccacccgggagaccaccagcaca
ctcaaggcctggctcaatgagcaccgcaagaacccctaccccactaagggtgaaaagatc
atgctggccatcatcaccaagatgaccctcacccaggtgtccacctggttcgccaatgca
cgccggcgcctcaagaaagagaacaagatgacatgggcacccaagaacaaaggtggggag
gagaggaaagcagagggcagagaggaggactcactaggctgcctaaacgctgacaccaaa
gacgttactcctagccaggaggcccgggggctccggctgagtgacctggaagacctggaa
gaagaggaggaggaggaggaggaggaggaggaacctgaagacgaggaggcaatggccaca
gctgcggacagactggcagagttcagtaagggcgcgcagtcgctgcctgggttttgcgct
gcagctcgagagggccgactggagcgcagggagtgcggcctggccgctccccgcttctcc
ttcaatgagccttccggatcggaagaagctgacttcctcgtggaggagccaggcggctcc
aggttgaccatgcactacccgtgcgtggagaaaccgcgcatctggtctctggcgcacacc
gcagcagctagctctgttgaaggtgcaccccctacccggcccaggccacgaagtcctgag
tgccatatgattactggacagcctcctgcctctgcccggcgactcgcggtccccagagac
tccgcgtgcaacgagtcttcctgcatagccaaagcctttggaaaccccaggtttgccctg
cagggactaccgctgaactgtgcgccttgcccgcggaggagcgagcctgcagtgcactgc
cagtactcgtctggagcagaaggttag
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