Callithrix jacchus (white-tufted-ear marmoset): 100389052
Help
Entry
100389052 CDS
T03264
Symbol
MED1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1 isoform X1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc01522
Endocrine resistance
cjc04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
100389052 (MED1)
09160 Human Diseases
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
100389052 (MED1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjc03021
]
100389052 (MED1)
Transcription machinery [BR:
cjc03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
100389052 (MED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med1
Motif
Other DBs
NCBI-GeneID:
100389052
NCBI-ProteinID:
XP_002748566
Ensembl:
ENSCJAG00000008593
UniProt:
U3EHB1
LinkDB
All DBs
Position
5:complement(115946056..115998092)
Genome browser
AA seq
1580 aa
AA seq
DB search
MKAQGETEESEKLSKMSSLLERLHAKFNQNRPWSETIKLVRQVMEKRVVMSSGGHQHLVS
CLETLQKALKVTSLPAMTDRLESIARQNGLGSHLSASGTECYITSDMFYVEVQLDPAGQL
CDVKVAHHGENPVSCPELVQQLREKNFDEFSKHLKGLVNLYNLPGDNKLKTKMYLALQSL
EQDLSKMAIMYWKATNAGPLDKILHGSVGYLTPRSGGHLMNLKYYVSPSDLLDDKTASPI
ILHENNVSRSLGMNASVTIEGTSAMYKLPIAPLIMGSHPVDNKWTPSFSSITSANSVDLP
ACFFLKFPQPIPVSRAFVQKLQNCTGIPLFETQPTYVPLYELITQFELSKDADPIPLNHN
MRFYAALPGQQHCYFLNKDAPLPDGRSLQGTLVSKITFQHPGRVPLILNLIRHQVAYNTL
IGSCVKRTILKEDSPGLLQFEVCPLSESRFSVSFQHPVNDSLVCVVMDVQDSTHVSCKLY
KGLSDALICTDDFIAKVVQRCMSIPVTMRAIRRKAETIQADTPALSLIAETVEDMVKKNL
PPASSPGYGMTTGNNPMSGTTTPTNTFPGGPITTLFNMSMSIKDRHESVGHGEDFSKVSQ
NPILTSLLQITGNGGSTIGSSPTPPHHTPPPVSSMAGNTKNHPMLMNLLKDNPAQDFSTL
YGSSPLERQNSSSGSPRMDICSGSNKTKKKKSSRLPPDKPKHQTEDDFQRELFSMDVDSQ
NPIFDVNMTADTLDTPHITPAPSQCSTPPTTYPQPVPHPQPSIQRMVRLSSSDSIGPDVT
DILSDIAEEASKLPSTSDDCPAIGTPLRDSSSSGHSQSTLFDSDVFQTNNNENPYTDPAD
LIADAAGSPNSDSPTNHFFHDGVDFNPDLLNSQSQSGFGEEYFDESSQSGDNDDFKGFAS
QALNTLGVPMLGGDNGETKFKGNNQADTVDFSIISVAGKALGPADLMEHHSGSQGPLLAT
GDLGKEKTQKRVKEGNGTSNSTLSGPGLDSKPGKRSRTPSNDGKNKDKPPKRKKADTEGK
SPSHSSSNRPFTPPTSTGGSKSPGSSGRSQTPPGVATPPIPKITIQIPKGTVMVGKPSSH
SQYTSSGSVSSSGSKSHHSHSSSSSSSSASTSGKMKSSKSEGSSSSKLSSSIYSSQGSSG
SGQSKNSSQSGGKPGSSPITKHGLSSSSSSTKMKPQGKPSSLMNPLSKPNISPSHSRPPG
GSDKLASPMKPVPGTPPSSKAKSPISSGSGGSHMSGTSSSSGMKSSSGLGSSGSLSQKTP
PSSNSCTASSSSFSSSGSSMSSSQNQHGSSKGKSPSRNKKPSLTAVIDKLKHGVVTSGPG
SEDPMDGQMGVSTNSSSHPMSSKHNMSGGEFQGKREKSDKDKSKVSTSGSSVDSSKKTSE
SKNVGSTGVAKIIISKHDGGSPSIKAKVTLQKPGESSGEGLRPQMASKNYGSPLISGSTP
KHERGSPSHSKSPAYTPQNLDSESESGSSIAEKSYQNSPSSDDGIRPLPEYSTEKHKKHK
KEKKKVKDKDRDRDRDKDRDKKKSHSIKPESWSKSPISSDQSLSMTSNTILSADRPSRLS
PDFMIGEEDDDLMDVALIGN
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctcagggggaaaccgaggagtcggaaaagctgagtaagatgagttctctcttg
gaacggctccatgcaaaatttaaccaaaataggccttggagtgaaaccattaagcttgtg
cgtcaagtcatggagaagagggttgtgatgagttctggagggcatcagcatttggtcagc
tgtttggagacattgcagaaggctctcaaagtaacatctttaccagcaatgactgatcgt
ttggagtccatagcaagacagaatggactgggctctcatctcagtgccagtggcactgaa
tgttacatcacgtcagatatgttctatgtggaagtgcagttagatcctgcaggacagctt
tgtgatgtaaaagtggctcaccatggggagaatcctgtgagctgtccagagcttgtacaa
cagctaagggaaaaaaattttgatgaattttctaagcaccttaagggccttgttaatctg
tataaccttccaggggacaacaaactgaagactaaaatgtacttggctctccaatcctta
gaacaagatctgtctaaaatggcaattatgtactggaaagcaactaatgctggtcccttg
gataagattcttcatggaagtgttggttatctcacaccaaggagtgggggtcatttaatg
aacctgaagtactatgtctctccttctgacctgctggatgacaagactgcgtctcccatc
attttgcatgagaataatgtttctcgatctttgggcatgaatgcatcagtgacaattgaa
ggaacatctgctatgtacaaacttccaattgcaccattaattatggggtcacatccagtt
gacaataaatggaccccttccttctcctcaatcaccagtgccaacagtgttgatcttcct
gcctgtttcttcttgaagtttccacagccaatcccagtatctagagcatttgttcagaaa
ctgcagaactgcacaggaattccattgtttgaaactcaaccaacttatgtacccctctat
gaactgatcactcagtttgagctatcaaaggacgctgaccccatacctctgaatcacaac
atgcgattttatgctgctcttccgggtcagcagcactgctatttcctaaacaaggatgct
cctcttccagatggccgaagtctacagggaacccttgttagcaaaatcacctttcagcac
cctggtcgagttcctcttatccttaatctgatcagacaccaagtggcctataataccctc
attgggagctgtgtcaaaagaactattctgaaagaagattctcctgggctcctccagttt
gaagtgtgtcctctctctgagtctcgtttcagcgtatcttttcagcaccctgtgaatgac
tccctggtgtgtgtggtaatggatgtgcaggactcaacacatgtgagctgtaaactctac
aaagggctgtcagatgcactcatctgcacagatgacttcattgctaaagttgttcaaaga
tgtatgtccatccctgtgacgatgagggctattcggaggaaagctgaaaccattcaggcc
gacaccccagcactgtccctcattgcagagacagttgaagacatggtgaaaaagaacctg
cccccggctagcagcccagggtatggcatgaccacaggcaacaacccaatgagtggtacc
actacaccaaccaacacctttccggggggtcccattaccaccttgtttaatatgagcatg
agcatcaaagatcggcatgagtcggtgggccatggggaggacttcagcaaggtgtctcag
aacccaattcttaccagtttgttgcaaatcacagggaacggggggtctaccattggctcg
agtccgacccctcctcatcacacgccgccacctgtctcttcgatggccggcaacaccaag
aaccacccgatgctcatgaaccttcttaaagataatcctgcccaggatttctcaaccctt
tatggaagcagccctttagagaggcagaactcctcttctggctcaccccggatggatata
tgctcgggtagcaacaagaccaagaaaaagaagtcatcacgattaccacctgacaaacca
aagcaccagactgaagatgactttcagagggagttattttcaatggatgttgactcacag
aaccctatcttcgatgtcaacatgacagctgacacactggatacgccacatatcactcca
gctccaagccagtgtagcactcccccaacaacttacccacaaccagtacctcacccccaa
cccagtattcaaaggatggtccgactatccagttcagacagcattggcccagatgtaact
gacatcctttcagacattgcagaagaagcttctaagcttcccagcactagtgatgattgc
ccagccattggcacccctcttcgagattcttcaagctctgggcattctcagagtaccctc
tttgactctgatgtctttcaaactaacaataatgaaaatccatacactgatccagctgac
cttattgcagatgctgctggaagtcccaatagtgactctcctacaaatcatttttttcat
gatggagtagatttcaatcctgatttattgaacagccagagccaaagtggttttggagaa
gaatattttgatgaaagcagccaaagtggggataatgatgatttcaaaggatttgcatct
caggcactaaatactttgggggtgccaatgcttggaggtgataatggggagaccaagttt
aagggcaataaccaagctgacacagttgatttcagtattatatcagtagctggcaaagct
ttaggtcctgcagatcttatggagcatcacagtggtagtcaaggtcctttactggccact
ggggacttagggaaagaaaagactcaaaagagggtaaaggaaggcaatggcaccagtaat
agtactctttcggggccaggattagacagcaaaccagggaagcgcagtcggaccccttct
aatgatgggaaaaacaaagataagcctccaaagcggaagaaggcagacactgagggaaag
tcgccatctcatagttcttctaaccgaccttttacccctcctaccagtacaggtggatct
aaatctccaggcagttcaggaagatctcagactcccccaggtgttgccacaccacccatt
cccaaaatcactattcagattcctaagggaacagtgatggtgggtaagccttcctctcat
agtcagtataccagcagtggttctgtgtcttcctcaggcagcaaaagccaccatagccat
tcttcctcttcttcctcatcttctgcttccacctcagggaagatgaaaagcagtaaatca
gaaggctcatcaagttccaagttaagtagtagtatatactctagccagggatcttctgga
tctggccagtccaaaaattcctcgcagtctggagggaagccaggctcctctcctattacc
aagcatggactgagcagcagctctagtagcaccaagatgaaacctcaaggaaagccatca
tcacttatgaatcctttaagtaaaccaaacatatccccttctcattcaaggccacctgga
ggctctgataaacttgcctccccaatgaagcctgttcctggaactcccccatcctctaaa
gccaagtcccctatcagttcaggttctggtggttctcatatgtcaggaactagttcaagc
tctggcatgaagtcatcttcagggttaggatcctcaggctcattgtcccagaaaactccc
ccatcatctaattcttgtacggcatcttcctcctccttttcctcaagtggctcttccatg
tcatcctctcagaaccagcatgggagttccaaaggaaaatctcccagcagaaataagaag
ccgtccttgacagccgtcatagataaactgaagcacggggttgtcaccagtggccctggg
agtgaagacccaatggacggccagatgggggtgagcacaaattcttccagccatcctatg
tcctccaaacataacatgtcaggaggagagtttcagggcaagcgggagaaaagtgataaa
gacaaatcaaaggtttccacctctgggagttcagtggattcttctaagaagacctcagag
tcaaaaaatgtggggagcacaggtgtggcaaaaattatcatcagtaagcatgatggaggc
tcccccagcattaaagccaaagtgactttgcagaaacctggggaaagtagtggagaaggg
cttagacctcagatggcatctaaaaactatggctctccactcatcagtggttccactcca
aagcatgagcgtggctctcccagccatagtaagtcaccagcatataccccccagaatctg
gacagtgaaagtgagtcaggctcctccatagcagagaaatcttatcagaatagtcccagc
tcagatgatggcatccgaccacttccagaatacagcacagagaaacataagaagcacaaa
aaggaaaagaagaaagtaaaagacaaagatagggaccgagaccgggacaaagaccgagac
aagaaaaaatctcacagcatcaagccagagagttggtccaaatcacccatctcttcagac
caatccttgtctatgacaagtaatacaatcttatctgcagacaggccctcaaggctcagc
ccagactttatgattggggaagaagatgatgatcttatggatgtggccctgattggcaat
tag
DBGET
integrated database retrieval system
