Callithrix jacchus (white-tufted-ear marmoset): 100389090
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Entry
100389090 CDS
T03264
Symbol
NRDE2
Name
(RefSeq) nuclear exosome regulator NRDE2 isoform X2
KO
K26109
nuclear exosome regulator NRDE2
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100389090 (NRDE2)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100389090 (NRDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
TPR_14
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
IHABP4_N
TAF4
Motif
Other DBs
NCBI-GeneID:
100389090
NCBI-ProteinID:
XP_002754238
Ensembl:
ENSCJAG00000017711
UniProt:
F7H673
LinkDB
All DBs
Position
10:complement(121032234..121081028)
Genome browser
AA seq
1168 aa
AA seq
DB search
MALFPAFAGVSEAPDSGSSRKELDWLSNPSFCVGSVTSLSQQPEAATAHVSEGSPLSRSP
LKSEPSDESDTNKKLKQTSRKKKKEKKKRRKHQHHKKTKRKHGQSSSSRSETDTDSEKDR
PSRAIGGRKKESEKPNQGNNAAADTGHRFVWLEDIQAVTGETFRTDKKPDPANWEYKSLY
RGDIARYKRKGDSCLGINPVKQRISWEGTSTEKKHSRKQVERYFTKKSVGLMNIDGIAIS
SKTEPPSSDPASFIPVKDLEDAAPVTTWLNPLGIYDQSTTQWLQGQGPPEQESKQPDTQP
DSESAALKARVEEFNRRVRENPRDTQLWMAFVAFQDEVMKSPGLYAIEEGEQEKRKRSLK
LILEKKLAILERAIESNQSSVDLKLAKLKLCTEFWEPSTLVKEWQKLIFLHPNNTALWQK
YLLFCQSQFSTFSISKIHSLYGKCLSTLSAVKDGSILSHPALPGTEEAMFALFLQQCHFL
RQAGHSEKAISLFQAMVDFTFFKPDSLKEMPTKGQVEFFEPFWDSGEPRAGEKGARGWKA
WMHQQERGGWVVISPDEDDEEPEEDDQEIKDKTLPRWQIWLAAERSRDQRHWRPWRPDKT
KKQTEEDCEDPERQVLFDDIGQSLIRLSSEDLQFQLVVAFLQFLGVPSGFTLPASCLYLA
MDEHSIFDNGLYDEKPLTFFNPLFSGASCVGRMDRLGCPRWTRGQNREGEEFIRNVFHLV
MPLFSGKEKSQLCFSWLQYEIGKVVWCLHTKNKKRLKSQGKNCKKLAKNLLKEPENRNNF
CLWKQYAHLEWLLGNTEDARKVFDTALGMAGSQGLKDSELCELSLLYAKLEVELEVELSP
EVRGAASARAVHILTKLTESSPYGPYTGQVLAVHILKARKAYEHALQDYLGDSCVSDPAP
TDSCTRLISLSKCFMLFQYLTVGIGAAVRIYEQVFAKLHSSVFPEGSGEGNSASSQSRSS
FLEAITLMHASLLRFHMKVSVYPLAPLREALSQALKLYPGNQVLWRSYVQIQNKSHSASK
TRRFFDTITRSAKPLEPWLFAIEAEKMRKRLVETVQRLDGREIHATIPETGLTHRIQALF
ENAMRSDSGSQCPLLWRMYLNFLVSLGNKERSKGVFYKALQNCPWAKVLYLDAVEYFPEE
MQEVLDLMTEKELRVRLPLEELELLLED
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttcccggcctttgcgggcgttagcgaggcccccgatagtgggagctccagg
aaagagttagactggctgagcaacccaagcttttgtgttggatccgtaacgtccctgagc
caacaacctgaagcagccacagcccatgtttctgaagggtcaccgctgtcgaggagtcct
ctgaaatcagagccttcagatgaaagtgacactaacaaaaagctcaaacaaacaagcaga
aaaaagaagaaagagaaaaagaaaagaaggaagcatcagcatcataagaaaacaaagagg
aaacatggacagtcgagtagcagtaggtcggagacagacactgattctgaaaaggacaga
ccttccagagccatcggaggccgtaaaaaggaatctgagaaaccgaatcaaggaaataat
gcggcagctgatactggacatcgctttgtttggcttgaggacattcaggctgtgacagga
gaaaccttcagaacagataagaaaccagatcctgcgaactgggaatacaagtctctctac
cgaggggatatagcaagatacaagaggaaaggagactcctgccttggcattaatcctgtg
aagcaacgcatatcttgggaagggacttccacagagaagaagcattcacgcaagcaggtt
gaacgctattttactaagaagagtgtggggttaatgaacattgatggaattgccattagc
agtaaaactgaacctccatcatctgaccccgcctcctttataccagtgaaggacttggaa
gatgcagctcctgttacaacctggttgaatcctctggggatttatgatcagtcaaccaca
cagtggctacaaggacagggtcctccagagcaggaatcaaagcagccagacacacagcca
gacagcgagagtgcagctctcaaggccagggtggaggagtttaacaggagggtgcgggag
aatccgcgggatacgcagctgtggatggcatttgttgcttttcaggacgaggtcatgaaa
agtcctgggctgtatgccatcgaggaaggagagcaggaaaagcgaaagcggtccctgaag
ctcattctggagaagaagctggccatcctggagcgggccattgagagcaaccagagcagt
gtggatctgaaactggccaagctgaagctctgcacagagttctgggagccctccactctg
gtcaaagagtggcagaaactgatatttttacatcccaataatacagccctgtggcagaaa
taccttttgttttgccagagccagtttagtaccttttcgatatcaaaaattcacagtctt
tatggaaaatgcttgagtactttgtctgctgttaaggacggcagcatcttatctcaccct
gcgttgcctggcacagaagaggccatgtttgcactctttcttcagcagtgccactttctg
cggcaggccggccactctgagaaggccatctcattgttccaggccatggtggacttcacc
ttcttcaaacctgacagcctgaaagagatgcctaccaaaggacaggtggaattctttgag
cccttttgggacagtggagagccccgggctggggaaaagggagcccgaggatggaaggcg
tggatgcaccagcaggagcgaggtggctgggtggtcatcagcccagacgaggatgacgaa
gaaccagaagaggacgaccaggaaataaaagataagactctgcccaggtggcagatctgg
cttgctgctgagcgttcccgagaccagaggcactggcggccctggcgccctgataagacc
aagaagcaaacggaggaagactgtgaggatcccgagagacaggtgctgtttgatgatatc
gggcagtctttgatcagactctccagcgaagacctgcagttccagctggtggtggccttt
ctgcagttcttgggtgtgccttccggcttcactctgccagcctcctgtctttatctggcc
atggatgagcacagcatctttgataatggactttatgatgaaaagcccttgacttttttc
aaccctttgttttccggggccagctgtgtgggccgcatggaccggctgggctgtcctcgc
tggaccaggggtcagaaccgagagggcgaggagttcatccgcaacgtcttccacctggtc
atgcctttgttttcaggcaaagagaagtctcagctctgcttctcctggttacagtatgag
attggaaaggtcgtgtggtgtctgcacactaaaaacaagaagagattaaagtcacaaggg
aagaactgcaaaaaactagccaagaatctccttaaggagccagaaaaccgcaacaacttt
tgcctctggaagcagtatgcccatctggagtggttgcttggcaacacagaggatgctaga
aaagtttttgacacagcactgggcatggcaggaagccaaggactgaaggactctgaactc
tgtgagctcagtcttctctatgccaagctggaggtggagctggaggtggagctgtcgccg
gaagtgagaggggccgcctccgcccgagctgttcacatattaaccaagctgaccgagagc
agcccctacgggccctacactggacaggtgttggctgttcacattttgaaagcacgaaaa
gcttacgagcacgcgctgcaggactatttgggtgacagctgtgtctccgatccagctccc
accgattcttgtacccgcctaattagcttgtccaaatgcttcatgctcttccagtatttg
actgtcgggattggtgctgctgtacggatatacgaacaggtatttgccaaactgcacagt
tctgtttttccagaaggctctggcgaggggaatagtgccagctcccagagtcggagcagt
tttctcgaagccatcacactgatgcacgcaagcctgctgagattccacatgaaagtgagt
gtttacccgctggcccctctgcgagaggcactctcacaggctttaaagctgtatccaggc
aaccaggttctttggaggtcctatgtccagattcagaataagtcccacagcgccagcaag
accaggagattttttgacacaatcaccaggtctgctaaaccgttggagccttggctgttt
gcaattgaagctgagaaaatgaggaaaagactagtggaaactgttcagaggttagacggt
agagagatccacgccacaattcctgagaccggcttaacgcatcggatccaagccctgttt
gaaaatgccatgcgcagcgacagtggcagccagtgccccttgctgtggaggatgtatttg
aactttttggtttccttaggaaataaagaaagaagcaaaggtgtattctacaaagcactt
cagaattgtccgtgggcaaaggtgttgtacctggatgccgtggagtacttccccgaggag
atgcaggaggtcctggatctgatgaccgagaaggagctccgggtgcgcctgccactggag
gagctggagctgctgctggaggattag
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