KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100389232
Entry
100389232         CDS       T03264                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100389232 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cjc03041]
    100389232 (SF3A1)
Spliceosome [BR:cjc03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    100389232 (SF3A1)
 Complex B
    100389232 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    100389232 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 100389232
NCBI-ProteinID: XP_002743717
Ensembl: ENSCJAG00000010370
UniProt: U3FGV5
LinkDB
Position
1:complement(198054912..198078276)
AA seq 793 aa
MPAGPVQAVPPPPPVATEPKQPMEEEASSKEDSAPSKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QQATQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQ
FLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFTKLKKEAENPREVL
DQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTT
PEELGARILIQERYEKFGESEEVEMEVESDEEDEKQEKTEEPPSQLDQDTQVQDMDEGSD
DEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKI
PASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVE
ETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDD
TKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPTMPPPVRTTVVSAVPVMPRP
PMASVVRLPPGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAP
VPAPAPMPPVHPPPPMEDEPTSKKLKTEDSLMPEEEFLRRNKGPVSIKVQVPNMQDKTEW
KLNGQVLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAV
IHLALKERGGRKK
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgccggccggacccgtgcaggcggtgcctccgccgccgccggtggccaccgagcctaaa
cagcccatggaagaggaagcgtcttcaaaggaggattctgcaccttctaaaccagttgtg
gggattatttaccctcctccagaggtcagaaatattgttgacaagactgccagctttgtg
gccagaaacggtcctgaatttgaagctaggatccgacagaacgagatcaacaaccccaag
ttcaactttctgaaccccaatgacccttaccatgcctactaccgccacaaggtcagcgag
ttcaaggagggcaaggctcaggagccgtcagctgccatcccaaaagttatgcagcagcag
cagcaggccacccagcagcagctgccccagaaggtccaagcccaggtaatccaagagacc
atcgtgcccaaagagcctcctcctgagtttgagttcattgctgatcccccctccatctca
gccttcgacctggatgtggtgaagctgacagctcagtttgtggctaggaacgggcgccag
tttctgacccagctgatgcagaaagagcagcgcaactaccagtttgactttctccgccca
cagcacagcctcttcaactacttcacgaagctagtggagcagtacaccaagatcttgatt
ccacccaaaggtttatttacaaagctcaagaaagaggctgaaaaccctcgagaagttttg
gatcaggtgtgttaccgagtagaatgggccaaattccaggaacgtgagaggaagaaggaa
gaagaggagaaggagaaggaacgggtggcctatgctcagatcgactggcatgattttgtg
gtggtggaaacagtggacttccaacccaatgagcaagggaatttcccaccccccaccacg
ccagaggagctgggggcccgaattctcattcaggagcgatatgagaagtttggggagagt
gaggaagttgaaatggaggtcgagtctgatgaggaggatgagaaacaggagaagacagag
gagcctccttcccagctggatcaggacacccaagtgcaagatatggatgagggttcagat
gatgaagaagaagggcagaaagtgcccccacccccagagacacccatgcctccacctctg
cccccaactccagaccaagtcattgtccgcaaggactatgatcccaaagcctccaagccc
ttgcctccagcccctgctccagatgagtatcttgtgtcccccattactggggagaagatc
cctgccagcaaaatgcaggaacacatgcgcattggacttcttgaccctcgctggctggag
cagcgagatcgctccatccgtgagaagcagagtgatgatgaggtgtatgcaccaggtctg
gatattgagagcagcttgaagcagttggctgagcgacgtactgacatcttcggtgtagag
gaaacggccattggtaagaagatcggtgaggaggagatccagaagccagaggaaaaggtg
acctgggatggccactcaggcagcatggcccggacccagcaggctgcccaggccaacatc
accctccaggagcagattgaggccattcacaaagccaaaggcctggtgccagaagatgac
accaaagagaagattggccccagcaagcccaatgaaatccctcaacagccaccgcctcca
tcttcagccaccaacattcccagctcagccccacccatcacttcagtgccccgaccaccc
acaatgccgcctccagttcgtactacagttgtgtccgcagtacccgttatgccccggcct
ccaatggcatctgtggtccggctgcctccaggctcagtgatcgctcccatgccacccatc
atccacgcacccagaatcaacgtggtgcccatgcctccctcggcccctcctatcatggcc
ccccgcccaccccccatgattgtgccaacagcctttgtgcctgctccacctgtggcacct
gtcccagctccagccccaatgccccctgttcatcccccacctcccatggaagatgagccc
acctccaaaaaactgaagacagaggacagcctaatgccagaggaggagttcctgcgcaga
aacaagggtccagtgtccatcaaagtccaggtgcccaacatgcaggataagacggaatgg
aaactgaatgggcaggtgctggtcttcaccctcccgctcacggaccaggtttctgtcatt
aaggtgaagattcacgaagccacaggcatgcctgcagggaaacagaagctacagtacgag
ggtatcttcatcaaagattccaactcactggcttactacaacatggccaatggtgccgtc
atccacctggccctcaaggagagaggcgggaggaagaagtag

DBGET integrated database retrieval system