Callithrix jacchus (white-tufted-ear marmoset): 100389371
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Entry
100389371 CDS
T03264
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
100389371 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjc03400
]
100389371 (XPC)
DNA repair and recombination proteins [BR:
cjc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
100389371 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
zf-B_box
Motif
Other DBs
NCBI-GeneID:
100389371
NCBI-ProteinID:
XP_002758697
Ensembl:
ENSCJAG00000016952
UniProt:
U3DIM7
LinkDB
All DBs
Position
15:complement(65065592..65100207)
Genome browser
AA seq
939 aa
AA seq
DB search
MARKRAAGGEPRGRQPRSQKSKGKSKARREEEEEDAFEDEKPPKKSLLSEREKGKRKRGC
SDPGVSADGPAKKKVAKVTVKSENLKVIKDEALGDGDDVRDFPSDLKKAHHPKRGATVNE
DSNEEEEESEDDWEEVEELSEPMLGDGKESTAFSPSLLPVKPVEIEIETPEQAKTRERSE
KIKMEFETYLRRAMKRFNKEVHEDTHKVHLLCLLANGFYRNNICSQPDLHAIGLSIVPSR
FTRVLPRDVDTYYLSNLVKWFTGTFTVNADLSACEQDNLQTTLERRFAIYSARDDEELVH
IFLLILRALQLLTRLVLSLQPIPLKSAAAKGKKPSKKRLTVDPGGSSESSSQVLENHTKA
KTSKGTKQEETFAKGTCKPSAKGKNKADRKKWCKPSSSEEDEGLGDKQKEATQRRPHGRE
RRVASRVSYKEESGSDEAGSGSDFELSSGEASDPSNEDSEPGPPKQRKAPAPQRTKAGSK
SASKTQCGSHHKDPSLPAASSSSSSSKRGKKMSSDGEKAEQRNLPGVDQWLEVFCEQEEK
WICVDCVHGMVGQPLTCYRYATKPMTYVVGIDSDGWVRDVTQRYDPAWMTVTRKCRVDAE
WWAETLRPYQSPFLDREKKEDMEFQAKHMDQPLPTAIGLYKNHPLYALKRHLLKYEAIYP
ETAAILGYCRGEAVYSRDCVHTLHSRDTWLKKARVVRLGEVPYKMVKGYSNRARKARLAE
PQLRDENDLGLFGYWQTEEYQPPVAIDGKVPRNEFGNVYLFLPSMMPIGCVQLNLPNLHR
VARKLDIDCVQAITGFDFHGGYSHPVTDGYIVCEEFKDVLLTAWENEQAIIEKKEKEKRE
KRALGNWKLLTKGLLIRERLKRRYGPKSEAAASHSDAGGGLSSDEEEGTSSQAEAARILA
ASWPQNREDEEKQKLKGGPKKTKRERKAAASHLFPFEKL
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggctcggaagcgcgcggccggcggggagccgcggggacgccaaccgcgcagccagaag
tccaagggcaagagcaaggcccggcgtgaggaggaggaggaggatgcctttgaagatgag
aaacccccaaagaagagccttctctccgaaagggagaagggaaagaggaagagaggctgc
agtgatcctggggtttcagcagatggtccagcaaaaaagaaagtggccaaggtgactgtt
aaatctgaaaacctcaaggttataaaggatgaagccctcggcgatggggatgatgttagg
gactttccaagtgacctcaaaaaggcacatcatccaaagagaggggctaccgtgaatgaa
gacagcaatgaggaagaggaagaaagtgaagatgactgggaagaggtggaagaacttagt
gagcctatgctgggtgacgggaaggaaagcacagccttctctccatctcttctgcctgtg
aagccagtggagatagagatcgaaacaccagagcaggcgaagacaagagaaagaagcgaa
aagataaaaatggagtttgagacttatcttcggagggcgatgaaacgtttcaataaagag
gtccacgaggacacacataaggttcatcttctctgcctgctagcaaatggcttctatcga
aataacatctgcagccagccagatttgcatgctattggcctctccatcgtcccatcccgc
tttaccagagtgttgcctcgagatgtggacacctactacctctcaaacctggtgaagtgg
ttcactggaacatttacagttaatgcagatctttcagcctgtgagcaagataacctgcag
accacattggaaaggagatttgctatttactctgctcgagatgatgaggaattggtccat
atattcttactgattctccgggctctgcagctcctgacccggctggtattgtctctacag
ccaattcctctgaagtcagcagcagcaaagggaaagaaaccttccaagaagagattgact
gtggatcctggaggctcttcggaatcttccagccaagttctagaaaaccacaccaaggca
aagaccagcaaaggaaccaaacaagaggaaacctttgctaagggcacctgcaagccaagt
gccaaagggaagaacaaggcagacagaaagaaatggtgcaagccctcctccagcgaggaa
gacgagggcctgggagacaagcagaaggaggcaacccagcgacgtccgcatggccgggag
cggcgggtggcctctagggtgtcttataaagaggagagtgggagtgatgaggctggcagt
ggctctgattttgagctctccagtggagaagcctctgatccctctaatgaggattctgag
cctggccctccaaagcagaggaaggcccctgctcctcagaggacaaaggctgggtccaag
agtgcctccaagacccaatgtgggagccatcataaggacccaagcttgccagcagcatcc
tcaagctcttcaagtagtaaaagaggcaagaaaatgtccagcgatggtgagaaggcagaa
caaaggaacctacctggtgtagaccagtggctagaggtgttctgtgagcaggaggaaaag
tggatatgtgtggactgtgtgcacggcatggtgggccagcctctgacctgttacaggtat
gccaccaagcccatgacctatgtggtgggcattgacagtgatggctgggtccgagatgtc
acacagaggtacgacccagcctggatgacagtgacccgcaagtgccgggttgatgctgag
tggtgggctgagaccttgagaccataccagagcccgtttttggacagggagaagaaagaa
gacatggagtttcaggcaaaacacatggatcagcctttgcccactgccattggcttatat
aagaaccacccgctgtatgccttgaagcggcatctcctgaaatatgaggccatctatccc
gagacagctgccatccttgggtattgtcgtggagaagcagtctactccagggattgtgtg
cacactctacactctagggacacgtggctgaagaaagcaagagtggtgaggcttggagaa
gtgccctacaagatggtgaaaggctattccaaccgtgcccggaaagcccgacttgctgag
ccccagctgcgggatgaaaatgatctgggcttgtttggctactggcagacggaagagtat
cagccccctgtggccatcgatgggaaggtgccccggaacgagtttgggaatgtgtacctc
ttcctgcccagcatgatgcctattggctgtgtccagctgaacctgcctaatctacaccgc
gtggcccgcaagctggacatcgactgtgtccaggccatcactggctttgatttccatggc
ggctactcccatcctgttactgacggatacatcgtctgcgaggaattcaaagatgtgctc
ctgactgcctgggaaaatgaacaggcgatcattgaaaagaaggagaaggagaaaagggag
aaacgggctctagggaactggaagctgctgaccaaaggtcttctcatcagggagaggctg
aagcgtcgctatgggcctaagagtgaggcagcagcttcccattcagatgcaggaggtgga
ctctcttctgatgaagaggagggtaccagttctcaagcagaagcagccaggatactcgct
gcttcctggcctcaaaaccgagaagatgaagaaaagcagaagctgaagggtgggcccaag
aagaccaaaagggaaaggaaggcagcagcttcccacctgttcccatttgagaagctgtga
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