Callithrix jacchus (white-tufted-ear marmoset): 100389714
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Entry
100389714 CDS
T03264
Symbol
RTTN
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cjc03037
]
100389714 (RTTN)
Cilium and associated proteins [BR:
cjc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100389714 (RTTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTTN_N
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
100389714
NCBI-ProteinID:
XP_035127217
Ensembl:
ENSCJAG00000003057
UniProt:
A0A8I3WL14
LinkDB
All DBs
Position
13:complement(107681831..107863060)
Genome browser
AA seq
2246 aa
AA seq
DB search
MVPAGLIRKLGHQLAEIRERALKSILCKIEHNLICHADLIQERQLFLHLLEWFNFPSVPM
KEEVLNLLSRLVKYPPAVQHLVDFGAVEFLSKLRSNVEPNLQAEIDGILDGLFILPSEVP
ALSSASYQTNQMELSKNPEILKGYFPQDKSNYQQMEVPPRPVVNQTVKCLKFSIFPWLPL
TTTDRHVLSSNESSLRSSNHTLIWNTCELLKDVIMQDFPAEIFLQRPKIVQSLLSLLKLA
FGGDGKHRLALQSVSCLQQLCTYLRSRLHFHRDPGFFSNKQDTVSQNSSLSYCHEARGTH
HSQNPSPGSSSPRPSVVGRTGQRPRGDGQDWDAVSSSGSSSHAHVNSRISVHSPLDVGHI
DLPELETEDTLELQFQQLSLPQFCVSILESAVPLLRTGSRQMIIRVLELLAVDMTLIGEA
VSADIWDDSSLFGIDMKEKLLLVLGALGETMCYHKSSVSLEQSEVMLVHHRMAFISISLF
AVRLLQALLPVEKASKFLPEPMTAALFLLSLDMPISLEYPNIHEAVVAYLEQLNSENYSI
YKQTAEAVYSIECTCNFLSDIEKEGEKDLLELVELADQSLRSFSCHQHFPLIKEIISICS
KIWKSAQASPLLQGESQKVLLHMLSHPLPQVKVETYHCCLEITKECLGVQNVTKPVSSLC
NGIHFLLHPKVLYEISVFGIQDPKSEVNTAAKAILLYLLQGRLMMTALTWNKFIESLCPV
IPVLQGYADTEDPLGNCIFLLSKASSDPGEEILPCTTRLRSMLRLLLVKKPSVRAQALKL
LAFHLTSEEGADTKRPLIDARVLSRVTNLFIVKKPIELKLDDRRELVIKLETVEKVYEIF
ISDDVDLVLRKSAAEQLAVIMQDIKMHAVVKKLRLTDKIIEYLNECVGQDGKVVECLVQP
CLTLLRKLLCGDPVMRVSLSQQSSVLMLLFRVSLIFHEDCTVVTEVGALFCLLLFDEVSR
MDMWSVNPPSKPSLLSVFSLPVSVFRRYHLPVHVIGHHAVSPYSIVLPLSSDCLALKPVS
DMLRMAWNLSWYHGSDNLLKQMNSETKTQEFLDTLKLSAEDILTLKITHMASGLQDCLHS
IVQAATHREVRAAVTRMSFYLLNDRLSLKGGPGSCGATLKSLAWHTVLNRFLQVLPASTE
DEKLLIDIIHFLNKLIKEQRKNSSLELLNWILELLLRHSANPLLDLLVLTESQAREESDD
IRTAVRQQLQKELIALFDTLLLNFMDITDRKCLELLYVFQTQLALKLLQCLKVTDAPHFY
GLPSLERTLRGMANLTAFPGWSSHSPLTKPLDICVKYLSGLLEVITSFYVERGGNAMSFM
GKGVTKSTILCLLHLSHEMMAQAGSLEWMSLWFLPLGSHGEEHISTQQGLAWLIPLWVDR
DPEVRFTSLGLGSALTTLETGCVALANSCQNISGGLWGTVVNILLDQSECSMVRREAAFI
LQNLLVIPMPTEIIKDYTWQTSTFKITTMSTMCWLFLTGPCVHDEDSGLSLIGKPALQAL
LYHCHFYEHLNQMVKHCYLGRCMFDLNFSAFDRNSEGSDLNGLDDSFKFWRPPSRISSED
PDPSSLSTSETTVAPSSESAEFQPLVQSTTLLPEASHDQFVAQGHQESTSPRPPQDSSLS
APLPKLCVFVTPSLLSAMCSLLDNLLMTAPRDTAKAVRQAHLIELLCSIADAALIQTCVR
GLRALLPSSPPAEHTQAQVSFLLEYLSSLSRLLQSCLLVEPDLVIQDELMKPLITNIIGI
LTICTKHVLDRELISAFYLTWTHLFNLLATLLRKTGAIALPSITMALAKHWTAMIDTFCK
CASLSTTCPALYTASLQFLSVLLTEEAKEHLQDKSKTSLCHSPTMASLLDKSQENQNSQR
LSDVILQCYEEKSSKDILKRVAANALMSLLAVSRRAQKRALEANLIDNCMEQMKHINAQL
NLDSLRPGKAALKKKEDGVIKELSIAMQLLRNCLYQNEECKEAALEAHLVPVLHSLWPWI
LMDDSLMQISLQLLCVYTANFPNGCSSLCWSSCGQHPGQAAHRGALGNSLMLCVLKLASQ
MPMENTTVQQMVFMLLSNLALSHDCKGVIQKSNFLQNFLSLTLPKGGNKHLSNLTILWLK
LLVNISFGEDGQQMILRLHGCLDLLTEMSKYKHKSSPLLPLLIFHNICFSPANKPKILAN
EKVITVLAACLESENQNAQRIGAAALWALIYNHQKAKAALKSPLVKRKVDEAYSLAKKTF
PNSEENPLNAYYLKCLENLVQLLNSS
NT seq
6741 nt
NT seq
+upstream
nt +downstream
nt
atggtcccggcggggctcatcaggaaactcggtcatcagctggccgagatcagggagcgc
gctctcaagagtattctctgcaagattgagcacaacttaatctgccacgctgatctcatt
caggagaggcaactttttcttcatctgctggaatggttcaatttcccgtccgttccaatg
aaggaagaggttctcaacttgttaagcagattggttaagtatcccccagcagtccaacat
ttggttgattttggtgcagtggagttcttatctaagcttcgatctaacgtggagccaaat
ctgcaggctgaaattgacggcattctggatggacttttcattcttccttcggaagttcct
gcactatcttccgcctcataccaaaccaatcaaatggaattatcaaaaaatcctgaaatc
ttaaaaggatattttccccaagataaaagtaattaccagcagatggaagtgccgccacga
ccagtggtaaatcagactgtgaagtgtttgaagttttctatatttccttggctacccctg
accaccacagatagacacgttctctcctctaatgaaagctctttaagaagtagtaaccac
actttaatctggaacacctgtgaactactgaaggacgttatcatgcaagactttcctgct
gagattttccttcaaaggccaaaaattgttcagagccttttatctctgttgaaactggcc
tttggaggagatgggaaacatcgcctcgcattacagtcagtgtcctgcctgcagcagctg
tgcacatatttaagaagcagacttcactttcaccgagatccaggttttttctccaacaaa
caggacacagtttcccaaaattcttctttatcttactgtcatgaagcaagaggtactcat
cattcccagaatccttccccaggaagcagcagccctcggccttcagtggttgggcgcaca
ggccagcgacccagaggagatggccaggattgggatgcagtgtcctcgagtggaagtagt
agtcatgctcacgttaactctaggatatccgttcattcacctttggatgtgggacacata
gatctgccagagctggaaactgaagacacattggaactacaattccagcagctcagtctt
ccccagttttgtgtctccattctggaatcagctgttcctctcttaagaacaggtagcaga
caaatgataataagagttctggaattgcttgcagtggacatgacacttattggtgaagca
gtttcagcagatatctgggatgacagcagcctttttggtatagatatgaaagagaaactg
ctcctggtgttgggagcccttggagaaactatgtgctaccataagagtagtgtcagtttg
gaacaatcagaggtgatgcttgtgcaccacagaatggcctttatcagcatttcactgttt
gcagttcgactgttgcaagcgcttctccctgttgaaaaggcaagcaagtttttaccagag
cccatgacagcagcgttgtttctcctttctttggacatgcctatttctttggaatatcca
aatattcatgaagctgttgtggcctatttggaacagctgaattctgaaaactacagtatt
tataaacaaactgcagaggccgtttattcaattgaatgcacctgtaacttcctgtctgat
attgagaaggagggagagaaggatctcttagaattagtggagctggcggatcaatccttg
cgtagcttttcctgtcatcagcatttccccctaataaaggaaatcatcagcatttgttca
aagatctggaaatctgcacaggccagtccattactacaaggagaaagtcagaaggtgctt
ctccatatgttgtctcacccgttgccacaagtgaaagttgaaacttaccactgctgtctg
gaaatcactaaggaatgtttaggtgttcagaatgtcactaaacctgtgtcttcactttgc
aatggaattcattttctacttcatccaaaagttctgtatgaaatctccgtatttggcatt
caagaccccaaaagtgaggtgaacactgctgccaaggccattctgttatacctgcttcag
ggacgattgatgatgacagcactgacctggaacaaatttattgaatctctctgtcctgta
attccagtgctgcagggctatgctgacacagaagatcctttgggtaactgcattttcctt
ctaagcaaagcaagttctgacccaggagaagagatccttccctgtactacccggttaagg
tccatgctgcgacttttgctagtgaaaaagccatcggtccgtgcacaagcattaaagctt
ttagcattccatcttaccagtgaagaaggggctgacacaaagcgccctctaatagatgcc
agagttctctccagagttactaatttattcattgtgaagaagcctattgaactcaaactg
gatgacagaagagagctggttattaagttggagactgttgaaaaagtttatgaaatcttc
atctcagatgatgttgatcttgttttgagaaagtcagctgccgaacagttagctgtgatt
atgcaagatattaaaatgcatgctgtggtgaaaaagttacgcttaactgacaaaataatt
gagtatttaaatgaatgtgtgggtcaagatggcaaggttgtagaatgtttggtacagcca
tgcctgacactcttgaggaagcttttatgtggcgatccggtcatgcgtgtttccctctca
caacagtcttctgttttgatgctgttattcagagtttccttaatatttcacgaagattgt
actgtcgtgactgaagttggagcactattttgtcttctattatttgatgaagtatcaaga
atggatatgtggtctgttaatcctcccagtaaaccgtctttgctatcagtcttcagtttg
cctgtttcagtttttagaaggtatcatctgcctgttcatgtaatcggacatcatgctgtg
agtccttactccatagttttgcccttatcttctgattgtttggccttgaagccggtgtca
gatatgctgagaatggcttggaacctgtcatggtatcatgggagtgataatctgttgaaa
caaatgaactctgaaactaaaacacaagaatttttggatacattgaagttatccgcagag
gacatcctcactctgaagataacacacatggctagtgggctgcaggactgcctccattcc
attgttcaggctgcaacccacagagaagttagggctgctgtcactaggatgagtttttat
cttctgaatgacagattgtctttaaagggtggccctggttcgtgtggggctaccttgaag
tccttggcttggcacaccgtgctgaacaggtttttacaagtgcttcctgcttccactgaa
gatgagaaactgctaatagatatcatacattttttaaataaattaataaaagaacaaaga
aaaaattcttcattggaacttctaaactggattctagaattacttcttagacatagtgca
aacccactgttggacctcctggttctgacagagtcacaggcacgagaagagtcagatgat
atccggactgctgtcaggcaacaacttcagaaagaactgattgctctttttgataccttg
ctgctcaatttcatggatattactgacaggaaatgcttggaacttctttacgtttttcaa
acacagctggctctgaaactgctccagtgtctgaaagtgacggatgcgcctcatttctat
ggcctgccatcccttgagcggactttacgagggatggctaacctcactgcatttccggga
tggagctcacattctcctctcacaaagcctctcgatatatgtgtgaagtatttgtcaggg
ctccttgaggtcattacttccttttatgtggagcgtggaggaaatgctatgtccttcatg
ggaaaaggtgttacaaagagcacaattctttgcttgcttcacttatcccatgagatgatg
gcccaggctgggagcttggagtggatgtcactttggttcttgcctttgggtagtcatggt
gaagaacatatttctactcaacaaggattggcttggctgattccattatgggttgatcgg
gacccagaggtgagattcacttcactgggattaggatcagcactgaccacccttgaaact
ggctgtgtggccttggcaaacagttgtcagaacatttctggggggctctggggaactgtg
gtgaacattcttctggaccagtctgaatgtagtatggtgcgccgggaggctgcatttatt
cttcagaatctccttgtaattccaatgcctacagaaattataaaggattatacttggcag
acctctacatttaaaataacgacaatgtccaccatgtgctggctgttccttacggggccc
tgtgtccatgatgaggactctggcctgtcactcattggaaaacctgcccttcaggctctt
ttatatcattgccatttttatgaacatttgaatcagatggtaaaacattgttacctaggg
cggtgtatgtttgatttgaatttttctgcttttgatagaaattcagaaggcagtgattta
aatggtttagatgactcattcaagttttggaggcctccatctaggatatccagtgaggat
ccagatccaagttctctctccacctcagaaacaacggtggcaccttcgtcggagagtgct
gaatttcagccacttgtgcagtcaacaacacttctacctgaagcctcccatgaccagttt
gtggctcaaggtcaccaggaaagtacatcaccacggccacctcaagattcatctctttct
gctcccctgcccaaactgtgtgtttttgttactccatctcttctttcagcaatgtgcagc
ctcttggacaacctcttgatgactgctcccagagacactgcaaaggctgttcgacaagct
catctcatcgaacttctttgtagcattgcagatgctgccctcatacagacatgtgtccgg
ggactcagggccctcctgccatcatcacctccagctgagcacactcaggctcaggtttcc
tttctcctggaatacctatcctctttgtccaggcttctgcagtcatgtttattggtggag
cctgaccttgtgattcaagatgagcttatgaaacctcttatcactaatatcattggaatt
ctcaccatatgcaccaaacatgtattagatagagagttaatatcagctttttatctcaca
tggacacatttatttaatcttctggccacactcctgaggaagactggtgccatcgcactc
ccgtctattactatggccctggccaagcactggacagcaatgattgatacgttctgcaaa
tgtgcaagcttgtccaccacgtgtcctgcactgtatactgccagcttgcaattcctttct
gttctcttgactgaagaagcaaaagaacatctccaggataagagcaaaacaagtttatgc
catagtccaacaatggcttcacttcttgataagtctcaggaaaatcagaactctcaacga
cttagtgatgtaattcttcagtgctatgaagaaaaatcctccaaagatatcctgaaaaga
gtagctgcaaatgcactgatgtcacttctggctgtcagtagaagagcgcagaaacgtgct
ttggaagccaatcttatagacaactgcatggagcagatgaaacacataaatgcacaactg
aatctagattctctgaggcctgggaaagcagcactgaaaaaaaaggaggatggtgttatt
aaagagttaagcattgccatgcagctcctaagaaactgtctttatcaaaatgaagaatgt
aaagaagcagctcttgaagctcaccttgtccctgtcttgcactctctctggccttggatt
ttgatggatgattcattgatgcaaatttctctgcagcttctttgcgtctatactgcaaat
tttccaaatggttgcagttctctttgttggtcaagttgtggacagcaccctggtcaagca
gcacacagaggagccctgggcaactctctgatgctgtgtgtcctaaagttggcttcccag
atgccaatggagaacaccacagttcagcagatggtttttatgcttctttcaaacctggcc
ttgtctcacgactgtaaaggagtaattcagaagagtaacttcttgcagaacttcctctct
ctaacattgccaaaaggaggaaataaacatctcagtaatctgacaattctttggttgaag
ttactcgtgaatatatcatttggagaagacgggcaacaaatgattctgaggcttcatggc
tgtctagacttactaacagagatgagcaaatacaagcataagagcagccctttactgcct
cttcttatctttcataatatttgcttcagtcctgctaataaacccaagatcctggctaat
gaaaaagtcatcactgtgctagctgcctgtctggaaagtgagaatcaaaatgctcagagg
attggagcagctgcgctttgggctctgatttacaatcatcagaaggcaaaagcagctttg
aaaagtccattagtaaaaagaaaagtggatgaagcatattccttagcaaagaaaactttc
ccaaattcagaagaaaaccctctaaatgcctattatttgaaatgtcttgaaaacctcgtg
cagcttcttaactcttcctga
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integrated database retrieval system
