Callithrix jacchus (white-tufted-ear marmoset): 100389857
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Entry
100389857 CDS
T03264
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100389857 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjc04147
]
100389857 (COPB2)
Membrane trafficking [BR:
cjc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100389857 (COPB2)
Exosome [BR:
cjc04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100389857 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
Helicase_dom4_arc
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
100389857
NCBI-ProteinID:
XP_002759591
Ensembl:
ENSCJAG00000002200
UniProt:
F6YR44
LinkDB
All DBs
Position
17:38086876..38135831
Genome browser
AA seq
906 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAE
RDGKNNVAFMSYFLQGKVDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEAK
GFQPSRSTAQQELDGKPASPTPVIVASHTANKEEKSLLELEVDLDNLELEDIDTTDINLD
EDILDD
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgacttgatatcaaaagaaagctaactgctagatctgatcgagttaagagt
gtggatttgcatcctacagagccatggatgttggcaagtctttacaatggcagtgtgtgt
gtttggaatcatgaaacacagacactggtgaagacatttgaagtatgtgatcttcctgtt
cgagctgcaaagtttgttgcaaggaagaattgggttgtgacaggagcagatgacatgcag
attagagtattcaattacaatactctggagagagttcatatgtttgaagcacactcagac
tacattcgctgtattgctgttcatccaacccagcctttcattctaactagcagtgatgat
atgcttattaagctctgggactgggataaaaaatggtcttgctcgcaagtgtttgaagga
cacacccattatgtcatgcagattgtgatcaaccccaaagataataaccagtttgccagc
gcctctttggacaggactatcaaggtgtggcagttgggctcttcgtcaccaaacttcact
ctggaaggacatgagaaaggcgtcaattgcattgattactacagtggtggggacaaacca
tacctcatttcaggtgcagatgaccgtcttgttaaaatatgggattatcagaataaaaca
tgtgtgcagacattggaaggacatgcccaaaatgtgtcttgtgccagctttcatcctgag
ttgccaattattattacaggttcagaagatggaacagtacgtatttggcattcaagcacc
taccggctagagagcacactgaattatggaatggagagggtatggtgcgtggccagtcta
agagggtccaacaatgtcgctttgggctatgatgaagggagcatcattgttaagcttggt
cgggaggaacctgcaatgtccatggatgccaatggaaagataatttgggccaagcattca
gaagtccagcaggccaacctaaaggcaatgggagatgctgaaattaaagatggagaaaga
ttgccactggcagtaaaggatatgggcagttgtgaaatataccctcagactattcagcac
aatcctaatgggcggtttgtggtggtctgtggtgatggggagtatatcatctacacggca
atggcattgagaaacaagagctttggatctgctcaggagtttgcatgggcccacgattcc
tcagagtatgcaataagagagagcaacagtgttgtaaagatatttaagaactttaaggaa
aaaaaatcatttaaaccagattttggagcagaaagtatctatggaggcttcttattggga
gtcagatctgtaaatggcttagccttctatgactgggacaatacagaactcataagaaga
attgaaattcagcccaaacatattttctggtctgactctggagagctagtctgtattgct
actgaggaatcattttttatccttaagtatctatcggaaaaagtcttggctgcacaggaa
acacatgagggagttactgaagatggcattgaagatgcctttgaggttcttggtgagatt
caggaaattgtgaaaacagggctttgggtaggcgattgcttcatttacacaagttctgtg
aacagattaaattattatgttggaggagaaatagtcaccattgcccacttggacaggaca
atgtatctcctaggctacattcctaaagacaacaggctttatctgggggataaagaattg
aacattgttagctattccctgctagtttcagtcctggaataccagacagccgtcatgcgg
agggactttagcatggctgataaggtccttcctaccattccaaaagaacagaggaccaga
gttgcacactttttggaaaagcagggcttcaagcagcaagctcttacggtatccacagat
cctgagcatcgtttcgagcttgctcttcagcttggagagttaaaaattgcataccagtta
gcagtggaagcagagtcagaacagaagtggaaacaacttgctgaacttgccattagtaaa
tgtcagtttggcttagcccaggagtgcctgcaccatgcacaggattatgggggtctgctg
cttttggccactgcctctggaaatgctagtatggtgaacaagctagcagagggtgcggag
agagatggcaaaaataatgtggcattcatgagctactttttacagggcaaggttgatgcc
tgcctagagctcttgattagaactggacggctgccagaagctgccttcctggcccgaact
tacctacccagtcaggtttcaagggtagtgaaactctggagagagaatctctcaaaagtc
aatcagaaagcagcagaatcccttgctgacccaacagagtatgaaaacctgttccctgga
ttaaaagaagcctttgttgttgaagaatgggtgaaggaaacacatgctgatctgtggcca
gccaaacaatacccacttgtcacgccaaatgaagagagaaatgttatggaagaagcaaaa
ggctttcagccctcaagatctacagctcagcaggaacttgatgggaaacctgcttctcct
actccagttattgtggcctcccacacagccaacaaggaagaaaagagtttactcgaacta
gaagtagatttggataatttggaattagaagatattgacacaacagatatcaatctggat
gaagatattttggatgactga
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