Callithrix jacchus (white-tufted-ear marmoset): 100389890
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Entry
100389890 CDS
T03264
Symbol
POLD1
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03030
DNA replication
cjc03410
Base excision repair
cjc03420
Nucleotide excision repair
cjc03430
Mismatch repair
cjc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100389890 (POLD1)
03410 Base excision repair
100389890 (POLD1)
03420 Nucleotide excision repair
100389890 (POLD1)
03430 Mismatch repair
100389890 (POLD1)
03440 Homologous recombination
100389890 (POLD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjc03032
]
100389890 (POLD1)
03400 DNA repair and recombination proteins [BR:
cjc03400
]
100389890 (POLD1)
Enzymes [BR:
cjc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100389890 (POLD1)
DNA replication proteins [BR:
cjc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
100389890 (POLD1)
DNA repair and recombination proteins [BR:
cjc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
100389890 (POLD1)
MMR (mismatch excision repair)
DNA polymerase delta complex
100389890 (POLD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
100389890
NCBI-ProteinID:
XP_054106527
Ensembl:
ENSCJAG00000003806
LinkDB
All DBs
Position
22:42614499..42647639
Genome browser
AA seq
1141 aa
AA seq
DB search
MNAFRESSQTPKAADSKIPFIGNAQNRPIHGDRKMDGKRRPGPGPGVPPKRARGGFWDED
DIPQPSQFEEELALMEEMEAEHRLQEQEEEELQSALEGAADGQIPLSAIDPRWLRPTPAP
LDPQTEPLIFQQLEIDHYVGPAQSVPGGPPLSRGSVPVLRAFGVTDEGVSVCCHVHGFAP
YFYTPAPPGFGPEHLGDLQRELNLAISRDNRGGKELTGPAVLAVELCSRESIFGYHGHGP
SPFLRITLALPRLVAPARRLLEQGIRVAGLGTPSFAPYEANVDFEIRFMVDTDIVGCNWL
ELPAGKYALRLKEKATQCQLEADVLWSDVVSHPPEGPWQRIAPLRVLSFDIECAGRKGIF
PEPERDPVIQICSLGLRWGEQEPFLRLALTLRPCAPILGAKVQSYEKEEDLLQAWATFVR
IMDPDVITGYNIQNFDLPFLISRAQTLKVHTFPFLGRVAGLRSNIRDSSFQSKQTGRRDT
KVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFHFLGEQKEDVQHSIITDLQNGNDQTRR
RLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTGVPLSYLLSRGQQVKVVSQLLRQAKQE
GLLMPVVRSEGGEDYTGATVIEPLKGYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPGA
AQKLGLTEDQFIKTPTGDEFVKTSVRKGLLPQILENLLSARKRAKAELARETDPLRRQVL
DGRQLALKVSANSVYGFTGAQVGKLPCLEISQSVTGFGRQMIEKTKQLVESKYTVENGYS
TSAKVVYGDTDSVMCRFGVSSVAEAMALGREAADWVSGHFPSPIRLEFEKVYFPYLLISK
KRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLVANLVTASLRRLLIDRDPEGAVAHAQD
VISDLLCNRIDISQLVITKELTRAASDYAGKQAHVELAERMRKRDPGSAPSLGDRVPYVI
ISAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQQLAKPLLRIFEPILGEGRAEAVLLRG
DHTRCKTVLTGKVGGLLAFAKRRNCCIGCRTVLSHQGAVCEFCQPRESELYQKEVSHLNA
LEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFYMRKKVRKDLEDQEQLLRRFGPPGPEA
W
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcattcagagaaagcagccagacaccaaaggctgcagattccaagatcccattt
ataggaaatgcccagaataggccaatccatggagacagaaagatggatggcaagcggcgg
ccaggcccagggcctggggtgcccccaaagcgggcccgtgggggattctgggatgaagat
gacatacctcagccatcccagttcgaggaggagctggcactgatggaggagatggaggca
gagcacaggctgcaggagcaggaggaggaggagctgcagtcagccctggagggggctgca
gacgggcagatcccactatccgccatagatcctcgctggcttcggcccacgccagccccc
ctggacccccagacagagcccctcatcttccaacagttggagattgaccattatgtgggc
ccagcacagtctgtgcctggcgggcccccactgtcccgaggctctgtgcccgtgctccgc
gcctttggggtcactgacgagggagtctctgtctgctgccatgtccacggctttgccccc
tacttctacaccccagcaccccctggtttcgggcccgagcacctgggggacctgcagcgg
gagctgaacttggccatcagccgggacaatcgtggtgggaaggagctgaccgggccggcc
gtgctggccgtggagctgtgctcccgagagagcatatttgggtaccacgggcacgggcct
tccccattcctgcgcatcaccctggcgctgccgcgcctcgtggcccccgcccgccgtctc
ctggagcagggcatccgtgtggcaggcctgggcacccccagctttgcgccctatgaggcc
aacgttgactttgagatccggttcatggtggacacggacatcgtcggctgcaactggctg
gagctccctgccgggaaatacgccctgaggctgaaggagaaggctacacagtgccagctg
gaggcggatgtgctgtggtccgatgtggtcagtcacccacctgaagggccatggcagcgc
atcgcgcccctgcgcgtgctcagcttcgacatcgagtgtgccggccgcaaaggcatcttc
cctgagcccgagcgggaccccgtgatccagatctgctcgctgggcctgcgctggggggag
caggagcccttcctacgcctggcgctcacactgcggccctgcgcccccatcctgggcgcc
aaggtgcagagctacgagaaggaggaggacctgctgcaggcctgggccaccttcgtccgc
atcatggaccctgatgtcatcaccggctacaacatccagaacttcgaccttcccttcctc
atctctcgggcccagaccctcaaggtacatacattccctttcctgggccgtgtggccggc
cttcgctccaacatccgggactcatcattccagtccaagcagacgggccggcgggacacc
aaggtggtcagcatggtgggccgcgtgcagatggacatgctgcaggtgctgctgcgtgag
tacaagctccgctcgtacacgctcaatgctgtgagcttccacttcctgggcgagcagaag
gaggacgtgcagcacagcattatcaccgacctgcagaatgggaatgaccagacccgacgc
cgcctggccgtgtactgcctgaaggatgcctacctgccgctgcggctgctggagcggctc
atggtgctggtgaacgccgtggagatggctcgggtcactggcgtgcccctcagctacctg
ctcagccgtggccagcaggtcaaggtcgtgtcccagttgttgcggcaggccaagcaggag
gggctgctgatgcccgtggtgaggtcggagggtggcgaggactacacgggagccactgtc
atcgagcccctcaaaggctactacgacgtccccatcgccaccctggacttctcctcgctg
tacccgtccatcatgatggcccacaacctgtgctacaccacgctcctgcggcccggggct
gcccagaaactgggcctgacggaggatcagttcatcaagacgcccaccggggacgagttt
gtgaagacctcggtgcggaaggggctgctgccccagatcctggagaacctgctcagcgcc
cggaagagggccaaggccgagctggccagggagacagaccccctgcggcgccaggtcctg
gatgggcggcagctggcactgaaggtgagcgccaactccgtatatggcttcactggcgcc
caggtgggcaagttgccgtgtctggagatctcacagagtgttacggggttcggacgccag
atgattgagaaaaccaagcaattggtggagtccaagtacacagtggagaacggctacagc
accagcgccaaggtggtgtatggtgacaccgactccgtcatgtgccgatttggtgtgtcc
tcagtggccgaggcgatggccctggggcgggaggccgcagactgggtgtctggtcacttc
ccgtcccccatccggctggagtttgagaaggtctacttcccgtacctgctcatcagcaag
aagcgctatgcaggcctgctcttttcctctcggcccgacgcccacgaccgcatggactgc
aagggcctggaggcagtgcgcagggacaactgtcccctggtggccaacctggtcaccgcc
tcgctgcgccgcctgcttattgaccgagacccggagggtgcggtggcccacgcgcaggac
gtcatctccgacctgctgtgcaaccgcattgacatttcccagctggtcattaccaaggag
ctgacccgcgcggcctccgactacgccggcaagcaggcccacgtggagctggccgagagg
atgaggaagcgggaccccgggagtgcgcccagcctgggtgaccgcgtcccctacgtgatc
atcagcgctgccaagggcgtggccgcctacatgaagtccgaggacccgctgtttgtgctc
gagcacagcctgcccattgacacgcagtactacctggagcagcagctggccaagcccctc
ctgcgcatcttcgagcccatcctgggcgagggccgtgctgaggccgtgctgctgaggggg
gaccacacacgctgcaaaacggtgctcacaggcaaggtgggcggcctcctggcctttgcc
aaacgccgcaactgctgcatcggctgccgcactgtgctcagccaccagggagctgtgtgt
gagttctgccagccccgagagtccgagctgtatcagaaggaggtgtcccatctgaatgcc
ctggaggagcgcttctcgcgtctctggacacagtgccagcgctgccagggcagcctgcat
gaggacgtcatctgcaccagccgggactgccccatattctacatgcgcaagaaggtgcgg
aaggacctggaggaccaggagcagctgctgcggcgctttgggccccctggccccgaggcc
tggtga
DBGET
integrated database retrieval system
