Callithrix jacchus (white-tufted-ear marmoset): 100389917
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Entry
100389917 CDS
T03264
Symbol
SDC3
Name
(RefSeq) syndecan-3 isoform X2
KO
K16337
syndecan 3
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04514
Cell adhesion molecules
cjc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100389917 (SDC3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100389917 (SDC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cjc00535
]
100389917 (SDC3)
Proteoglycans [BR:
cjc00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
100389917 (SDC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
100389917
NCBI-ProteinID:
XP_008999028
Ensembl:
ENSCJAG00000006019
UniProt:
A0A8I3ZYI9
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All DBs
Position
7:complement(64555247..64650749)
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AA seq
442 aa
AA seq
DB search
MKPGPPHRAGAAHGAGAGAGATAGPGARGLLLPPLLLLLLAGHAAGAQRWRSENFERPVD
LEGSGDDDSFPDDELDDLYSGSGSGYFEQESGIEKAMRFSPDVALAVSTTPAVLPTTSIQ
PVGTPFEELPSERPTPEPATSPLEVTEVPEEPSQRATAVSTTMATTAATTTGALTVATVP
VTVTTAAPSTPAAPPVTATTAVVRTTGVQRLLPLPLTTAATARATTPEAPSPPTTVAVLD
TEAPTPRLVSTATSRPRALPRPATTQEPDSPERSTLPLGTTAPGPTEVAQTPTPETYLTT
VRDEPEVPVSGGPSGDFELPEEETTQPDTANEVVAVGGAAAKPSPPPGTLPKGARPGPGL
LDNAIDSGSSAAQLPQKSILERKEVLVAVIVGGVVGALFAAFLVTLLIYRMKKKDEGSYT
LEEPKQASVTYQKPDKQEEFYA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggggccgccgcaccgtgccggggccgcacacggggccggcgccggggccggg
gccacggccgggcccggggcccgcgggctgctcctgccaccgctgctgctgctgctgctg
gcggggcacgccgcgggggcccagcgctggcgcagtgagaactttgagaggcccgtggac
ctggagggctctggggacgatgactcctttcccgatgatgaactggatgacctctactcg
gggtcgggctctggctacttcgagcaggagtcaggcattgagaaagccatgcgcttcagc
ccagatgtggccctggcagtgtccaccacacctgcagtgctgcccaccacgagcatccag
cccgtgggcacaccattcgaagagctcccctctgagcgccccaccccggagccagccacc
agtcccctagaggtgacagaagtcccagaggagcccagccagagagccaccgccgtctcc
accaccatggctaccactgctgccacaaccacaggggccctgactgtggccacagtgcct
gtcacagtgaccactgctgcccccagcacccctgcagcaccccctgttacagccaccact
gctgttgtaaggaccaccggcgtacagaggcttctgcctcttccactgaccacagcagcc
acggcacgggccactacccccgaggcgccctctccccccaccacggtggctgtcttggac
actgaggcaccaacacccaggctggtcagcacagctacctcccggccaagagcccttccc
aggccagccaccacccaggaacctgacagccctgagaggagcaccctgcccctggggacc
actgcccctggacccacagaggtggctcagaccccaactccggagacctacctgaccaca
gtccgggatgagccagaggtgccagtgagtggggggcccagtggagactttgagctacca
gaagaagagaccacacaaccagacacagccaatgaggtggtagctgtgggaggggctgcg
gccaagccgtcacctccacctgggacactgcccaagggtgcccgcccaggccctggcctc
ctggacaatgccatcgactcgggcagctcagctgctcagctgcctcagaagagtatcctg
gagcggaaggaggtgctcgtagctgtgattgtgggcggggtggtgggcgccctctttgcc
gccttcttggtcacactgctcatctatcgcatgaagaaaaaggatgagggcagctacaca
ctggaagaacccaagcaggcaagcgtcacataccagaagcctgacaagcaggaggagttc
tatgcctag
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