Callithrix jacchus (white-tufted-ear marmoset): 100390067
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Entry
100390067 CDS
T03264
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjc03016
]
100390067 (TRUB1)
Enzymes [BR:
cjc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
100390067 (TRUB1)
Transfer RNA biogenesis [BR:
cjc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100390067 (TRUB1)
Prokaryotic type
100390067 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
100390067
NCBI-ProteinID:
XP_035125085
Ensembl:
ENSCJAG00000019357
UniProt:
U3FN83
LinkDB
All DBs
Position
12:104536539..104665474
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AA seq
351 aa
AA seq
DB search
MAASEVPAVVSSSSLKTDTSPVLETAGRVAAMAATPPATAAAAAVAAAARTGSEARVSKA
ALATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWSKRKKQTLKIGHGGT
LDSAARGVLVVGIGRGTKMLTSMLSGSKRYIAIGELGKATDTLDSTGKVTEEKPYDKITQ
EDIEGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSISLQKFQ
PPFFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDKWTIDD
IAQSLEHCSSLFPAELALKKSKPEKSNEQVLSCEYITLNEPKGEDDVIKTC
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggccgcttctgaggtgccggcggtggtgtcttcgtcgtctttgaaaacagacacatcc
cctgttcttgaaactgcaggaagggtcgcagcaatggctgcgaccccgccagcaacggct
gcagctgccgctgttgcggccgcggccagaacaggatccgaagccagggtctccaaggcc
gctttggctacaaagctgctgtctctgagcggcgtgttcgcggtacacaagcccaaaggg
cccacttcagccgagctgctgaatcggttgaaggagaagctgctggcagaagctggaatg
ccttctccagaatggagcaagaggaaaaagcagactttgaaaattgggcatggagggact
ctagacagcgcagcccgaggagttctggtggttggaattggaaggggaacaaaaatgctg
accagtatgttgtcagggtccaagagatacattgccattggagaactggggaaagctact
gatacactcgattctacggggaaagtaacagaagaaaaaccttacgataaaataacacaa
gaagatattgaaggcattctacagaaatttactgggaatataatgcaagtgccccctctc
tattctgcattaaagaaagatggacagagactttcaactttgatgaagagaggtgaagtt
gtagaagcaaaacctgccaggccagtgaccgtatacagtatctcccttcagaaattccag
ccaccatttttcacattagatgttgaatgtggaggaggtttttatatcagaagcttggtc
agtgacattggaaaagaactatcttcctgtgccaatgtgttagagctgacccgaaccaaa
caggggccatttacgctagaagagcatgcccttcctgaagataaatggacaattgatgac
attgcacagtctcttgagcattgctcatctcttttcccagcagagttggcacttaaaaaa
tcaaaacctgagaagtctaatgaacaggttttgagctgtgaatatataactctaaatgag
ccaaagggggaagatgatgtaattaagacgtgttga
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