Callithrix jacchus (white-tufted-ear marmoset): 100390219
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Entry
100390219 CDS
T03264
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjc03036
]
100390219 (DDX4)
Enzymes [BR:
cjc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100390219 (DDX4)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100390219 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100390219
NCBI-ProteinID:
XP_035147451
Ensembl:
ENSCJAG00000001951
UniProt:
A0A8I3X833
LinkDB
All DBs
Position
2:complement(150837475..150917401)
Genome browser
AA seq
727 aa
AA seq
DB search
MGDEDWEAEINPHMSSYVPIFEKDRYSSGENGDNFNMAPTSSSETDDRPRRDHFMKSGFA
SGRNFGNRDAGESNKRGNTSAMGGFGAGRSFGYRGFSNSKFEDGDSSGFWRESSNDCEDN
QTRNRGFSKRGGYRDGSNSDASGPTRRGGRGSFRGCHGGFGQGSPSNELDQDKCMQRTGG
LFGSRRPALSGTGNGDTSQSRSGSGSGRGGYKGLNEEVVTGSGKNSGKSEAEGGESGDTQ
GPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLS
NNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMRDGVTASRF
KELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILC
ATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMF
SATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRNIGD
ERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRSGKCPVLVATSVA
ARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDPESDNHLAQPLIKVL
TDAQQDVPAWLEEIAFSAYIPGFSGSTRGSVFASVDTRKNYQGKSTLNTAGFSSSQMSNP
VDDESWD
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgaagattgggaagcagagatcaaccctcatatgtcttcctatgttcccata
tttgagaaggataggtattcttctggagaaaatggagacaattttaacatggctcccact
tcatcctcagaaacggatgatagacctcgaagagatcatttcatgaaaagtggatttgcc
tctgggcggaattttggaaacagagatgctggcgaatctaataaaagaggaaatacatct
gcaatgggtggttttggagctggaaggagttttggatacagaggtttttcaaacagcaaa
tttgaagatggtgatagttctggtttctggagagaatctagtaatgactgtgaagacaat
caaacacggaacagagggttttccaagagaggtggctatcgagatggaagtaattcagac
gcttcagggccaaccagaagaggtgggagaggtagtttccgaggttgccatggaggattt
ggtcaaggaagtccaagtaatgaattagaccaagacaaatgtatgcaacgcactggtggc
ctttttggttctagaagaccagcattaagtggcacaggtaatggcgatacttctcaaagc
agaagtggcagtggaagtggacgaggtggttacaaaggtttaaatgaagaagtagtaaca
ggctctggaaagaattctgggaagtcagaagcagaaggaggagaaagtggtgatactcaa
ggaccaaaagtgacctacataccccctcctccacctgaggatgaggactccatctttgca
cattatcagacaggcataaactttgacaaatacgacactattcttgtggaagtgtctgga
catgatgcaccaccagcaattctgacttttgaagaagctaatctctgtcagacactgagt
aacaacattgctaaagctggttatactaagcttactcctgtgcaaaaatacagtattcct
atcatacttgcaggacgagatttgatggcttgtgctcaaacagggtctgggaagactgcg
gcttttctcctgccaattttggcccatatgatgcgtgatggagtaactgccagtcgtttt
aaagagttgcaggaaccagagtgtattattgtagcaccaactcgagaattggtcaaccag
atttatttggaagccagaaaattttcttttgggacttgtgtaagagctgttgttatatat
gggggaacccagctgggtcattcaattcgacagatagtacaaggctgtaatatattatgt
gctactcctggaagactaatggatatcataggcaaagaaaagattggtctcaaacagatc
aaatatttagttttggatgaagctgatcgcatgttggatatggggtttggaccagaaatg
aagaagttaatttcttgcccaggaatgccatcaaaagaacagcgccaaacccttatgttc
agtgcaacttttccagaggaaattcagaggttggctgcagagtttttaaagtcgaattat
ttgtttgttgctgttggacaagtgggtggagcatgtagagatgtgcagcagactgttctc
caagttggccagttctcaaaaagagaaaaacttgttgaaattctacgaaatataggtgat
gaaagaactatggtatttgttgaaactaagaagaaagcagattttattgcaacttttctt
tgtcaagaaaaaatatcaactacaagtattcatggtgatcgggaacagagagagcgggag
caagctcttggagattttcgcagtggaaagtgcccagttcttgttgctacttcagtagct
gccagagggctagatattgaaaatgtacagcatgttatcaattttgatcttccttctacc
attgatgaatatgttcatcgaattgggcgtactggtcgttgtgggaatactggcagagca
atttccttttttgatcctgaatcggataaccatttagcacagcctctaataaaagtatta
acagatgctcaacaggatgttcctgcatggctggaagaaattgcctttagtgcatacatt
cctggcttcagtggtagtacaagaggaagtgtatttgcatcagttgatactagaaagaac
taccagggcaagagcactttgaacacagcaggattttcttcttcacaaatgtccaatcca
gtagatgatgagtcatgggattaa
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