Callithrix jacchus (white-tufted-ear marmoset): 100390294
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Entry
100390294 CDS
T03264
Symbol
DDX10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10 isoform X1
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjc03009
]
100390294 (DDX10)
Enzymes [BR:
cjc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100390294 (DDX10)
Ribosome biogenesis [BR:
cjc03009
]
Eukaryotic type
90S particles
Helicases
100390294 (DDX10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
100390294
NCBI-ProteinID:
XP_035120352
UniProt:
A0A5F4W8C3
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All DBs
Position
11:6219018..6528862
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AA seq
873 aa
AA seq
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MVKTADSPGSEARPDPVRSFNRWKKKHSHRQNKKKQLRKQLKKPEWQVEREDISRLMLNY
EKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGRDVLGAAKTGSGKT
LAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKD
LKHEAERINNINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAII
ENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEKAKYSTPATLEQNYIVCQLQQK
TSVLYSFLRSHLKKKSIVFFSSCKEVQYLYGVFCRLRPGVSILALHGRQQQMRRMEVYNE
FVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILL
PSEKAMVQQLLQKKVPVKEIKINPEKLIDVQKKLESFLAQDQDLKERAQRCFVSYIRSVY
LMKNKEVFDVSKLPIPEFALSLGLAVAPRIRFLQKMQKQPTKELAISQANKVIEPRAPSL
TNDEVEEFRAYFSEKMSILQKGGQRLEGREHRQANDTSDEEQEEEEEEEEEEEMEEKLAK
VKGSQPPSLPNTSEAQKIEDVPTQFLDRDDEEDDVDFLKVKRHNVFGLDLKEEKTLQKKE
PSKSSIKKKVTKVAEAKKVMKRNFKVNKKITFTDEGELVQQWPQMQKSAIKDAEEDDDTG
GINLDKAKERLQEEDKFDKEEYRKKIKAKHREKRLKEREARREANKRQAKAKDEEEAFLD
WSDEDDGGFDPSTLPDPDKYRSSEDSDSEDTESKTSDARKQGMTKRNNSEVEDLGPTRCN
RKKAKWDTLEPLDTGLSLAEDEELVLHLLRSQS
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaactgccgactctccgggttcggaagcccgacccgacccggtgcggagcttc
aatcgctggaagaaaaaacacagccacaggcagaacaaaaagaagcagttgaggaagcaa
ctgaagaaacccgagtggcaggtcgagcgcgaggatatcagccgcctcatgctgaactat
gagaagataaatgtaaacgaaattacaaggttttcagattttcccttgtccaaaaaaaca
ttgaaaggtttgcaagaagctcagtaccgtttggtaactgagatccagaagcagaccatt
ggattggctttgcaaggtagagatgtacttggagcggctaaaactggatctggcaagacc
ttggctttccttgttccagtactggaagccttatatcgtctgcagtggacctcaacagat
gggctgggggttctcataatatcacctacgagagaactggcctatcagacttttgaggtt
ctccgaaaagtaggaaagaatcatgacttttcagctggtctcatcattggtggaaaggat
ctgaaacacgaagctgagaggatcaacaacataaatatacttgtgtgcacaccaggtcgg
cttcttcaacacatggatgaaacagtgtcttttcatgctactgatctccagatgttagtt
ctcgatgaagcagatagaatcttggatatgggctttgctgataccatgaatgctattatt
gaaaatctccccaagaaacggcagactttacttttctcagcaacacaaactaaatctgtg
aaggaccttgcacgtttgagtttgaaaaaccctgagtatgtctgggttcacgaaaaagca
aaatacagcacccctgccactttggaacagaactacatcgtttgtcagctgcagcaaaaa
acaagcgtgctgtattcctttctgagaagccatctgaagaagaagagcattgtatttttt
tccagttgcaaagaggtccagtatctgtacggagtgttttgccggctacgtcctggtgtt
tctatccttgccctccatggccgacagcagcagatgagaagaatggaagtctacaacgag
tttgtccgtaagagagctgcggtgctctttgctactgacattgcagccaggggcctggat
ttcccagccgtgaattgggttcttcagtttgattgtcctgaggatgccaacacatatatt
cacagagcaggcagaaccgccaggtacaaagaggatggcgaagctttattaattttgctt
ccctcagaaaaagctatggtgcaacaacttcttcagaagaaagtacccgtgaaggaaatc
aaaatcaatccagagaaacttatagatgtccagaaaaagttggaatcttttttagctcaa
gatcaagatttgaaagaaagagctcaaaggtgtttcgtctcctatatacgatcagtatat
ctgatgaagaataaagaagtatttgatgtgagcaagttacctatacctgaatttgccctg
tctcttggtctcgctgtggcaccacgcataagatttcttcagaaaatgcagaagcaaccc
accaaagaattggcaatcagccaagctaataaagtcattgagccgcgggctccctccctc
accaatgacgaagtggaagaatttagagcctacttcagtgagaaaatgtccatccttcag
aaaggtggacaaagacttgaagggagagagcacagacaggctaacgatactagtgatgaa
gaacaggaagaggaggaggaggaagaagaagaagaagaaatggaagagaaactggcaaaa
gtaaagggatctcaacctccatctcttcctaacactagtgaggcacagaagatcgaggac
gttcctacgcagttcctggacagagatgatgaggaagatgatgttgatttcttgaaggtg
aagcggcacaatgtgtttggattggaccttaaagaggagaaaacattacagaagaaagaa
ccttctaaatccagcatcaagaaaaaagtgaccaaagttgcagaagccaaaaaagtaatg
aagagaaattttaaagtgaataagaagataacgtttactgatgaaggggagctggttcag
cagtggccacaaatgcagaaatcggccatcaaggatgctgaggaagatgatgacacaggt
ggcatcaacttagataaagcaaaggaaagacttcaggaagaggacaaatttgacaaagaa
gaatataggaagaaaattaaggcaaagcatcgggagaaaagactgaaagaaagggaagcc
aggcgagaagccaacaagagacaagcaaaggccaaagatgaagaggaagcctttctggat
tggagtgatgaagatgatggtggatttgatccaagcacactcccagatccagataagtac
agaagctccgaagattcagatagtgaagatacggaaagcaaaactagtgatgccaggaag
caggggatgacgaagaggaacaacagtgaagtggaagacctgggacccacgaggtgtaac
agaaagaaggccaagtgggacacgttagagcctttggataccggcctgtctttagcggag
gacgaagagcttgtgttacatctgctaagaagtcaaagctaa
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