Callithrix jacchus (white-tufted-ear marmoset): 100390386
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Entry
100390386 CDS
T03264
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X6
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100390386 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjc04121
]
100390386 (TRIP12)
Enzymes [BR:
cjc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
100390386 (TRIP12)
Ubiquitin system [BR:
cjc04121
]
Ubiquitin ligases (E3)
HECT type E3
100390386 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
100390386
NCBI-ProteinID:
XP_002749917
Ensembl:
ENSCJAG00000013123
LinkDB
All DBs
Position
6:complement(147776631..147937999)
Genome browser
AA seq
2040 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSHLGQAKHKGYSPPESRKSNSKAPKVQ
SNTTSELSRGHLSKRSCSSSSAVIVPQPEDPDRANTSERQKTGQVPKKDHSRGVKRSASP
DYNRTNSPSSAKKPKALQHTESSSETNKPHSKSKKRHLDQEQQLKSAQSPSTSKAHTRKS
GATGGSRSQKRKRTESSCVKSGSGSESTGAEERSAKPTKLASKSATSAKAGCSTITDSSS
AASTSSSSSAVASASSTVPPGARVKQGKDQNKARRSRSASSPSPRRSSREKEQSKTGGSS
KFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELP
SLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPESNQEAVNSSAARTDEAPQ
GAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIG
SGASSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQME
HNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRR
HSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLT
HQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTPPILSSGMFIMVV
RMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLIC
ELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEQINEDTGT
ARAIQRKPNPLANTNTSGYSESKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGP
AVRHKCLRAILRIIYFADAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQK
LPDIFSVYFRREGVMHQVKHLAESESLLTSPPKACTNGSGSLGSTTSVSSGTATAATHAA
ADLGSPSLQHSRDDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPT
TTQSPKSSFLASLNPKTWGRLSAQSNSNNIEPARTAGGSGLARAASKDTISNNREKIKGW
IKEQAHKFVERYFSSENMDGSNPALNVLQRLCAATEQLNLQVDGGAECLVEIRSIVSESD
VSSFEIQHSGFVKQLLLYLTSKSEKDAVSREIRLKRFLHVFFSSPLPGEEPIGRVEPMGN
APLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTGGSFSLNRGSQALKFFNTHQLKCQLQR
HPDCANVKQWKGGPVKIDPLALVQAIERYLVVRGYGRVREDDEDSDDDGSDEEIDESLAA
QFLNSGNVRHRLQFYIGEHLLPYNMTVYQAVRQFSIQAEDERESTDDESNPLGRAGIWTK
THTIWYKPVREDEESNKDCVGGKRGRAQTAPTKTSPRNAKKHDELWHDGVCPSVSNPLEV
YLIPTPPENITFEDPSLDVILLLRVLHAISRYWYYLYDNAMCKEIIPTSEFINSKLTAKA
NRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEI
NQSDSQDSRVAPRLDRKKRTVNREELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTL
EFYALVSQELQRADLGLWRGEEVTLSNPKGSQEGTKYIQNLQGLFALPFGRTAKPAHIAK
VKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFDIDPVVARSVYHL
EDIVRQKKRLEQDKSQTKESLQYALETLTMNGCSVEDLGLDFTLPGFPNIELKKGGKDIP
VTIHNLEEYLRLVIFWALNEGVSRQFDSFRDGFESVFPLSHLQYFYPEELDQLLCGSKAD
TWDAKTLMECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSL
NPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6123 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgactcaataggaggaaggtcacatttagggcaggcaaaa
cataagggatatagccctcctgagagtagaaaatctaattctaaggcacccaaagtgcag
tctaataccacttctgaactgtcaaggggacacctttctaaaagaagctgcagttcatca
tctgctgtcatagttccacaaccagaggatccagacagagccaatacttcagaaagacaa
aaaacggggcaggtgcctaagaaagaccattctcgaggagtgaaacgcagtgctagtcca
gactacaacaggaccaattctcctagctctgccaaaaaaccaaaagcacttcagcatact
gaatcttcctcagaaacaaataagccacatagtaagtcaaagaagagacatttagaccag
gagcaacaactgaaatctgcacaatcaccatcaacaagcaaggctcataccagaaagagt
ggggccactggcggttcacggagtcagaaaagaaaaaggacagagagttcctgtgtaaag
agtggctctgggtctgaatcaactggtgcagaagagagatctgcaaaacctaccaagctg
gcttcaaaatcagccacctcagccaaagctgggtgtagcaccatcactgattcttcttct
gctgcctctacttcctcctcgtcttctgctgtagcctcggcgtcctccactgtaccacca
ggtgccagagtgaaacaaggaaaagatcagaacaaggccaggcgttcccgttcagcatcc
agtcccagtcctagaagaagtagcagggaaaaggaacagagtaaaactggtggctcttca
aaatttgattgggctgctcgtttcagccctaaagttagccttcctaaaacaaaactgtct
cttccagggtcttctaagtcagagacatcaaaacctggaccttctggattacaggccaaa
ttagcaagtttaagaaagtctaccaagaagcgcagtgagtctccacctgctgagctcccc
agtttgaggcggagcacacgccaaaagaccacgggctcctgtgctagtaccagtcggcga
ggctctggcctgggcaaaagaggagcagctgaagctcgtcgacaggagaaaatggcagac
cctgaaagcaaccaggaggcagtaaattcttcagctgctcggacagatgaagctccccaa
ggagctgcagcctctagttctgttgcaggagctgttggcatgaccacctctggggagagt
gaatcagatgattcagagatgggacgcttgcaagctttgttagaggcaaggggtcttccc
cctcacctgtttggtcctcttggtcctcggatgtcacagcttttccatagaacaattgga
agcggagctagttctaaggcccagcagctactacaaggattacaagccagtgatgaaagt
cagcagcttcaggcagttattgagatgtgtcagttactggtcatgggaaatgaggagaca
ctgggagggtttcctgtcaagagtgttgttccagctttgataacgttacttcagatggag
cataattttgatattatgaaccatgcttgtcgagccttaacatacatgatggaagcactt
cctcgatcatctgctgttgtagtagatgctattcctgtctttttagaaaagctgcaagtt
attcagtgtattgatgtggcagagcaggccttgactgccttggagatgttgtcacggaga
cacagtaaagccattctacaggcgggtggtttggcagactgcttgctgtacctagaattc
ttcagcatcaatgcccaaagaaatgcattagcaattgcagccaattgctgccagagtatc
acgccagatgaatttcattttgtggcagattccctcccattgctaacccaaaggctaaca
catcaggataaaaagtcagtagaaagcacttgcctttgttttgcacgtctagtggacaac
ttccagcatgaggagaatttactccagcaggttgcttccaaagatctgcttacaaatgtt
caacagctgttggtagtgactccaccaattttaagttctgggatgtttataatggtggtt
cgcatgttttcactgatgtgttccaactgtccaactttagctgttcaacttatgaaacaa
aacattgcagaaacgcttcactttctcctttgtggtgcctccaatggaagttgtcaggaa
cagattgaccttgttccacgaagtcctcaagaactatatgaactcacatccctgatttgt
gaacttatgccatgtttaccaaaagaaggcatttttgcagttgataccatgttgaagaag
ggaaatgcacagaacacagatggtgcgatatggcagtggcgtgatgatcggggcctctgg
catccatataacaggattgacagccggatcattgagcaaatcaatgaggacacgggaaca
gcacgtgccattcagagaaaacctaaccccctagccaatactaacactagtggatattca
gagtcaaagaaggatgatgctcgagcacagcttatgaaagaggatccggaactggctaag
tcttttattaagacattatttggtgttctttatgaagtgtatagttcctcagcaggacct
gcggtcagacataagtgccttagagcaattcttaggataatttattttgcggatgccgaa
cttctgaaggatgttctgaaaaatcatgctgtttcaagtcacattgcttccatgctatca
agccaagacctgaagatagtagttggagcacttcagatggcagaaatcttaatgcagaag
ttacccgatatttttagtgtttacttcagaagagaaggtgtaatgcatcaagtaaaacac
ttagcagaatcagagtctttgttgacaagtccaccaaaggcgtgtacgaatgggtcagga
tccttgggatccacaacttcagtcagcagtgggacggccacagctgccactcatgcagca
gctgacttgggatcacccagcttgcagcatagtagagatgattctttagatctcagccct
caaggtcgattaagtgatgtcctaaagagaaaacgactgccaaaacgagggccaagaagg
ccaaagtactcacctccaagagatgatgacaaagtagacaatcaagctaaaagccccacc
actactcagtcacctaaatcttctttcctggcaagcttgaatccaaaaacatggggaagg
ttaagtgcacagtccaacagcaacaacattgagccagcacggactgcaggaggtagtggt
cttgccagggctgcctcaaaggataccatctccaataatagagaaaaaattaaaggttgg
attaaggagcaggcacataaatttgtagaacgttatttcagttctgagaatatggatgga
agcaaccctgcattgaatgtccttcagagactttgtgctgcaactgaacaactcaacctc
caggtggatggtggagctgagtgccttgtagaaatccgtagcatagtctcagagtcagat
gtttcatcatttgaaatccaacatagtggatttgtgaagcagctgttgctttatttgaca
tctaaaagtgaaaaggatgctgtgagcagagagatcagattaaagagatttcttcatgta
tttttttcttctccacttcctggagaagagccaattggaagagtggaaccaatgggtaat
gcacctttgttggcattagttcacaagatgaacaactgcctcagccagatggaacaattt
ccagtcaaagtacatgatttccctagtggaaatgggacgggaggcagcttttctctcaac
agaggatcacaggctttaaaatttttcaacacacatcaattaaaatgccagttacaaaga
catccagactgtgcaaatgtgaagcagtggaagggtggacctgtcaagatcgaccctctg
gctttggtacaagctattgagagatacctagtggttagagggtatggaagagtaagagaa
gatgatgaagacagcgatgatgatggatcagatgaggaaatagatgagtctctggctgct
cagttcctaaattctggaaatgtaagacacaggctgcagttttatattggagaacatttg
ctgccatataacatgactgtgtatcaggcagtacggcagtttagtatacaggctgaagat
gaaagagaatccacggatgatgagagcaatcctctaggcagagctggtatttggacaaag
actcatacaatatggtataaacctgtgagagaggatgaagaaagtaataaagattgtgtt
ggtggtaaaagaggaagagcccaaacagctccaacaaaaacttcccctagaaatgcaaaa
aagcatgatgagttatggcatgatggagtgtgcccatcagtatcaaatcctttagaagtt
tacctcattcccacaccacctgaaaatataacatttgaagacccgtcattagatgtgatc
cttcttttaagagttttacatgctatcagtcgatactggtattacttatatgataatgca
atgtgcaaggaaattattccaactagtgaatttattaacagtaagttaacagcaaaagcc
aataggcaacttcaagatcctttagtaatcatgacaggaaacatcccaacgtggcttact
gagctaggaaaaacctgcccatttttctttccttttgatacccggcaaatgcttttttat
gtaactgcatttgatcgggaccgagcaatgcaaagattacttgatacgaacccagaaatc
aaccagtctgattctcaagatagcagagttgcacctagattggatagaaaaaaacgtact
gtgaacagagaggagctgctgaaacaggctgagtctgtgatgcaggaccttggcagctca
cgggccatgttagaaatccagtatgaaaatgaggttggtacaggtcttgggcctacactg
gagttttatgcacttgtatctcaggaactacaaagagctgacttgggtctttggagaggt
gaagaagtaactcttagcaatccaaaaggaagccaagaagggaccaagtatattcaaaac
ctccagggcctatttgcgcttccctttggtaggacagctaagccagctcatattgcaaag
gttaagatgaagtttcgcttcttaggaaaattaatggccaaggctatcatggatttcaga
ttggtggaccttccccttggcttacccttttataaatggatgctacggcaagaaacttcc
ctgacatcacatgatttgtttgacatcgacccggttgtagccagatcagtttatcaccta
gaagacattgtcagacaaaagaaaagactcgaacaagataaatcccagaccaaagagagt
ctacagtatgcattagaaaccctgactatgaatggctgctctgttgaagatctaggactg
gatttcactttgccagggtttcccaatattgaactgaagaaaggagggaaggatatacca
gtcactatccacaatttagaggagtatctaagactggttatattctgggcactaaatgaa
ggcgtttctaggcaatttgattcgttcagagatggatttgaatcggtcttcccactcagt
catcttcaatacttctacccagaggaactggatcagctcctttgtggcagtaaagcagac
acttgggatgcaaagacactgatggaatgctgcaggcctgatcacggttatactcatgac
agtcgggctgtgaagtttttgtttgagattctcagtagttttgataatgagcagcagagg
ttgtttctccagtttgtgactggtagcccaagattgcctgttggaggattccggagtttg
aatccacctttgacaattgtccgaaagacgtttgaatcaacagaaaacccagatgacttc
ttgccctctgtaatgacttgtgtgaactatcttaagttgccggactattcaagcattgag
ataatgcgtgaaaaactgttgatagcagcaagagaagggcagcagtcgttccatctttcc
tga
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integrated database retrieval system
