KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100390419
Entry
100390419         CDS       T03264                                 
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
  KO
K10140  DNA damage-binding protein 2
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03420  Nucleotide excision repair
cjc04115  p53 signaling pathway
cjc04120  Ubiquitin mediated proteolysis
cjc05161  Hepatitis B
cjc05169  Epstein-Barr virus infection
cjc05200  Pathways in cancer
cjc05202  Transcriptional misregulation in cancer
cjc05210  Colorectal cancer
cjc05212  Pancreatic cancer
cjc05213  Endometrial cancer
cjc05214  Glioma
cjc05216  Thyroid cancer
cjc05217  Basal cell carcinoma
cjc05218  Melanoma
cjc05220  Chronic myeloid leukemia
cjc05222  Small cell lung cancer
cjc05223  Non-small cell lung cancer
cjc05224  Breast cancer
cjc05225  Hepatocellular carcinoma
cjc05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100390419 (DDB2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100390419 (DDB2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100390419 (DDB2)
   05202 Transcriptional misregulation in cancer
    100390419 (DDB2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    100390419 (DDB2)
   05212 Pancreatic cancer
    100390419 (DDB2)
   05225 Hepatocellular carcinoma
    100390419 (DDB2)
   05226 Gastric cancer
    100390419 (DDB2)
   05214 Glioma
    100390419 (DDB2)
   05216 Thyroid cancer
    100390419 (DDB2)
   05220 Chronic myeloid leukemia
    100390419 (DDB2)
   05217 Basal cell carcinoma
    100390419 (DDB2)
   05218 Melanoma
    100390419 (DDB2)
   05213 Endometrial cancer
    100390419 (DDB2)
   05224 Breast cancer
    100390419 (DDB2)
   05222 Small cell lung cancer
    100390419 (DDB2)
   05223 Non-small cell lung cancer
    100390419 (DDB2)
  09172 Infectious disease: viral
   05161 Hepatitis B
    100390419 (DDB2)
   05169 Epstein-Barr virus infection
    100390419 (DDB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cjc04121]
    100390419 (DDB2)
   03400 DNA repair and recombination proteins [BR:cjc03400]
    100390419 (DDB2)
Ubiquitin system [BR:cjc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     100390419 (DDB2)
DNA repair and recombination proteins [BR:cjc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      100390419 (DDB2)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_EIPR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_HPS5 WD40_RFWD3 NBCH_WD40 Beta-prop_EML Beta-prop_Vps41 Beta-prop_WDR35_TULP_N WD_LRWD1 WD40_MABP1-WDR62_1st HMw1_D2
Other DBs
NCBI-GeneID: 100390419
NCBI-ProteinID: XP_002755275
Ensembl: ENSCJAG00000020000
UniProt: F6XWJ8
LinkDB
Position
11:109007660..109037820
AA seq 427 aa
MAPKKRPETQKTSKIVLRPRSKRSRSPRELEPEAKKLCAKGSGPSRRCDSDCLWAGLAGP
QILPPCRSIVRTLHQHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAWH
PTHPSTVAVGSKGGDILLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGT
TRLQDFKGNILRVFASSDTINIWFCSLDVSANSRMVVTGDNVGNVILLNMDGKELWNLRM
HKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDG
ARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNVIVVGRYPDPN
FKSCTPYEMRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAMGYHVLIWSQ
EEARTRK
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggctcccaagaaacgcccagaaacccagaagacctccaagattgtattacgccccagg
agcaagaggagcaggagtccccgggagctggagcccgaggccaagaagctctgtgcgaag
ggctccggtcctagcagaagatgtgactcagactgcctctgggcggggctggctggccca
cagatcctgccaccatgccgcagcatcgtcaggaccctccaccagcataagctgggcaga
gcttcctggccatctgtccagcaggggctccagcagtcctttttgcacactctggattct
taccggatattacaaaaagccgccccctttgacaggagggctacatccttggcatggcac
ccgactcaccccagcaccgtggctgtgggttccaaagggggagatatcttgctctggaat
tttggcatcaaggacaaacccaccttcatcaaagggattggagctggagggagcatcact
gggctgaagtttaaccctctcaataccaaccagttttacgcctcctcaatggagggaaca
actaggctgcaagactttaaaggcaacattctacgagtttttgccagctcagacaccatc
aacatctggttttgtagcctggatgtgtctgccaatagccgaatggtggtcacaggagac
aatgtggggaatgtgatcctgctgaacatggacggcaaagagctttggaatctcagaatg
cacaaaaagaaagtgacgcatgtggccctgaacccatgctgtgattggttcctggccaca
gcctccgtagatcaaacagtgaaaatctgggacctgcgccaggttagagggaaagccagc
ttcctctactcgctgccgcacaggcatcctgtcaacgcagcttgtttcagtccggatgga
gcccggctcctgaccacggaccagaagagcgagatccgagtttactctgcctcccagtgg
gattgccccctgggcctcatcccgcaccctcaccgtcacttccagcacctcacacccatc
aaggcggcctggcatcctcgctacaatgtcattgtcgtcggccgatacccagatcctaat
ttcaaaagttgtactccctatgaaatgaggacaatcgatgtgttcgatggaaactcaggg
aagatgatgtgtcagctctacgacccagaatcttctggcattagttcgctcaatgagttc
aatcctatgggggacacgctggcctctgcaatgggttaccacgttctcatttggagccag
gaggaagccaggacacggaaatga

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