Callithrix jacchus (white-tufted-ear marmoset): 100390480
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Entry
100390480 CDS
T03264
Symbol
PWP2
Name
(RefSeq) periodic tryptophan protein 2 homolog isoform X3
KO
K14558
periodic tryptophan protein 2
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100390480 (PWP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjc03009
]
100390480 (PWP2)
Ribosome biogenesis [BR:
cjc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100390480 (PWP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Utp12
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_IFT140_1st
eIF2A
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_DCAF4
Utp13
PQQ_3
Beta-prop_Nup120_160
WD40_like
UTP15_C
Motif
Other DBs
NCBI-GeneID:
100390480
NCBI-ProteinID:
XP_002761514
Ensembl:
ENSCJAG00000005570
UniProt:
A0A5F4W2D8
LinkDB
All DBs
Position
21:47983516..48009179
Genome browser
AA seq
918 aa
AA seq
DB search
MKFAYRFSNLLGTVYRRGNLNFTFDGNSVISPVGNRVTIFDLKNNRSDTLPLATRYNIQC
VGLSPDGRLAIIVDEGGDALLVSLVCRSVLHRFHFKGSVHSVSFSPDGRKFVVTKGNIAQ
MYHAPGKKREFNAFFLDKTYFGPYDETTCIDWTDDSRCFVVGSKDMSTWVFGAERWDNLI
YYALGGHKDAIVACFFESSSLDLYSLSQDGVLCVWQCDTPPEGLRLKPPAGWKADLLQRE
EEGEENQEGDRETTIQGKATPAEEEKTGKVKYSRLAKYFFNKEGDFNNLTAAAFHKKSHL
LVTGFASGIFHLHELPEFNLIHSLSISDQSIASVAVNSSGDWIAFGCSGLGQLLVWEWQS
ESYVLKQQGHFNSMVTLAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTFTEHSSGVTGVT
FTATGYVVVTSSMDGTVRAFDLHRYRNFRTFTSPRPTQFSCVAVDASGEIVSAGAQDSFE
IFVWSMQTGRLLDVLSGHEGPISGLCFNPMKSILASASWDKTVRLWDMFDSWRTKETLAL
TSDALAVTFRPDGAELAVATLNSQITFWDPENAVQTGSIEGRHDLKTGRKELDKITAKHS
AKGKAFGTLCYSADGHSILAGGMSKFVCIYHVREQILMKRFEISCNLSLDAMEEFLNRRK
MTEFGNLALIDQDAGQEDGVAIALPGVKKGDMSSRHFKPEIRVTSVRFSPTGRCWAATTT
EGLLIYSLDTRVLFDPFELDTSVTPRRVREALRQQDFTRAILMALRLNESKLVQEALEAV
PRDEIEVVSSSLPELYVEKVLEFLASSFEVSRHVEFYLLWTQKLLMLHGQKLKARATTLL
PVIQFLQKSIQRHLDDLSKLCGWNRYNMQYALAVSQQRGTKRPLEPLGSEEEEAEASEDN
SLQLLGGAGRDSEEEMLA
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcgcttaccggttttcaaatttgctgggtacggtttaccggcgtgggaaccta
aattttaccttcgatggaaattcagttatcagtcccgtgggcaatagagtcactatattt
gaccttaagaacaacagatccgacacgctgcccctggccactcggtacaacatccagtgc
gtgggactgtccccagatgggcgcctcgctatcatcgtggatgaagggggcgatgcgctg
ctggtcagcctggtctgcaggtctgtgctgcaccgcttccacttcaagggttctgtgcac
agcgtgtccttctcccccgatggcaggaagtttgtcgtcacaaagggcaacattgcccag
atgtatcatgcccccgggaagaagcgggagttcaacgccttctttctggacaagacctat
tttggaccttacgatgagaccacctgcatcgactggacagatgactccaggtgctttgtg
gtggggagcaaagacatgtccacctgggtgttcggagcagagcgctgggacaacctcatc
tactatgcactgggggggcataaggacgccatcgtggcctgcttctttgaatccagcagc
ctggacctgtactcactcagccaggacggagtgctgtgcgtgtggcagtgtgacacgccc
cccgagggcttgcgactgaagccgcctgcaggctggaaggcggacctgctgcagcgggaa
gaagagggggaggagaaccaggagggggacagagagactaccatccagggaaaagccact
ccggcggaagaggagaagacaggaaaagtgaagtactcgcggctggccaagtatttcttt
aataaagaaggagattttaacaatctgacagctgccgcatttcacaagaagtctcacctc
ttggtcactggctttgcttctggaatcttccatcttcatgagctgccggaattcaacctc
atccactcactgagcatctcagatcaaagcatcgcctcagtggccgtcaacagctctggg
gactggatcgcctttggctgttcaggtctgggccagctgctggtgtgggagtggcagagt
gagtcctacgtgctcaagcagcagggccacttcaacagcatggtgaccctggcctactca
cccgacggacagtacattgtgactggcggggacgatggcaaggtcaaagtgtggaacacc
ctcagtggcttctgcttcgtcactttcacggagcattccagtggggtgactggtgtgacc
ttcactgccactggctacgtcgtggtgacctcatccatggacgggaccgtgcgagccttt
gaccttcacaggtaccgaaacttccgcaccttcacctccccacgccccacccagttctcc
tgtgtggcggtggatgcgagtggggagatcgtctccgcgggggcgcaagactcatttgag
atcttcgtgtggtccatgcagacaggcaggctccttgacgttttgtccggacacgagggg
cccatcagtggtctgtgttttaacccaatgaagtccatcctggccagtgcctcctgggac
aagacggtgcggctgtgggacatgtttgacagctggaggaccaaggagacgctggccctg
acctctgatgccttggctgtgacttttcgtcctgatggtgcggaactggctgtggccacg
ctgaactcccagatcaccttctgggaccctgagaacgcagtgcagacaggctccatcgag
ggcaggcacgacctcaagacgggcaggaaggagctggacaagattaccgccaagcactca
gccaaggggaaagccttcggcaccctgtgctactccgcagacggtcacagcatcctggcg
ggaggcatgtccaagtttgtgtgcatctaccacgtccgtgagcagattctcatgaagagg
ttcgagatctcttgtaacctgtctctggatgccatggaggaatttttgaaccgaagaaaa
atgacagagtttggcaacctggcactgattgatcaagacgctgggcaggaggacggagtg
gcgatagcactgccaggcgtcaagaaaggtgacatgagttctcggcacttcaaacccgag
atcagggtgacctccgtccgcttctctcccactgggcgctgctgggcggccaccaccacg
gaggggctcctcatctactccctggacacgcgtgtgctctttgacccattcgagctggac
accagcgtcacccccaggcgggtgcgcgaggcgctgcgccagcaggacttcacccgggcc
atcctcatggccctccggctcaacgagagcaagctggtgcaggaggccctggaggcggtg
cccagggacgagattgaagtggtcagctcctcccttcctgaattgtatgtggagaaagtg
cttgagttcttagcttcctcctttgaagtgtctcgccacgtggaattctacctcctctgg
actcagaaactgctcatgctgcatggacagaagctgaaggccagagccacaaccctgctg
cctgtgattcagttcctccagaagagcatccagcggcacctggacgacctgtcgaaactc
tgtggctggaaccgctataacatgcagtacgcactcgcggtttcccagcagcgcggcacg
aaacgcccactggagccactgggaagtgaggaggaggaggcagaagcatctgaagacaac
agcctgcagctgctcggaggagcaggcagagactccgaagaagagatgctggcctag
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