Callithrix jacchus (white-tufted-ear marmoset): 100390481
Help
Entry
100390481 CDS
T03264
Name
(RefSeq) LOW QUALITY PROTEIN: chromatin-remodeling ATPase INO80-like
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100390481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjc03036
]
100390481
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
100390481
INO80 complex (yeast)
100390481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
HDA2-3
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
100390481
NCBI-ProteinID:
XP_035152289
LinkDB
All DBs
Position
4:105837013..105842199
Genome browser
AA seq
1543 aa
AA seq
DB search
MASELGARDDGGCTELAKPLYLQYLERALRLDHFLRQTSAIFNRNISSDDSEDGLDDSNP
LLPQSGDPLIQVKEEPPNSLLGEISGAGSSGILNTYSLNSVLQSESKCDKGNLYNFSKLK
KSRKWLKSILLSNESSXADSQSEDDDEEEELSLSREELHNMLRLHKYKKVHQNKYSKDKE
LQQYQYYSAGLLSTYDPFYETQRHLRGPKKKKFKEEKKLKAKLKKVKKKRRRDEELSSEE
SPRRHHHQTKVFAKFSHDAPPPGTKKKHLSIEQLNTRRRKVWLSIVKKELPKANKQKASA
HNLFLTNSRKLAHQCMKEVRRAALQAQKNCKETLSRAHRLTKEMLLYWKKYEKVEKEHRK
RAEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHFMSRKRDMGHDGIQEEILRKLE
DSSTQRQIDIGGGVVVNITQEDYDSNHFKAQALKNAENAYHIHQARTRSFDEDAKESRAA
ALRAANKSGTGFGESYSLANPSIRAGEDIPQPTIFNGKLKGYXLKGMNWLANLYEQGING
ILADEMGLGKTVQIIALLAHLAERENIWGPFLIISPASTLNNWHQEFTRFVPKFKVLPYW
GNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLVVQVVKYFQWVKWQYMVLDEAQALKS
SSSVRWKILLQFQCRNRLLLTGTPIQNTMAEIWALLHFIMPTLFDSHEEFNEWFSKDIES
HAENKSTIDENQXMILKPFMLRRIKKDVENELSDKIEILMYCQLTSRHKLLYQVLKNKIS
IEDLLQSSMGSTQQAQNTTSSLMNLVMQFRKVCNHPELFEQQETWSPFHNSLKPYHISKF
IYCRGQIRVFNHSRDRWLRVLSPFAPDYIQQSLFHRKGLNEESCFSFLCFIDISPAEMAN
FMLQGLLARWLALFLSLKASYRLHQLRSWGEPEGENQQRYLRNKDFLLGVNFPLSFPNLC
SCPLLKSLVFSSHCKAVSGYSDQIIHQQRSATSSLHRCLLTELPSFLCVASPRVTAVPLD
SYYNDRSAEYERRVLKEGGSLAAKECLLNGAPELAADWLNRQSQFFPEPAGGLWSIXPQN
GWSFIRIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHT
YMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVD
QQAMDRAHRLGQTKQVTIYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKADTLKLKE
VVSLLLDNEELXKKLRLRQEEKRQQEETNRVKEHKWKREKYAEKKKKEDELDGKRRKEGV
NLVIPFVPSADNSNLSADGDDSFISVDSAMPSPFSEISISSELHTGSIPLDESSSDMLVI
VDDPASSAPQSRATNSPASIKGSVSDTVNGISIQEMPAAGRGHSTRSRGRPKGSGSTAKG
AGKGRSRKSTAGSAAAMAGAKAGAAAYAYNVSKGISASSLQTSLVRPAGLADFGPSSASS
PLSSPLSKRNNVPGTPKNLHMTSSLAPDSLVQKQGKGNPSGGR
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagagttgggtgccagggatgatggcggctgcactgagctggcaaagcccctg
tatcttcagtacttggagagggccctccggttggaccatttcctgcgacaaacgtcagcc
atcttcaacaggaatatttctagtgatgacagtgaagatggactggatgacagtaatcca
ttattgccccagtctggggatcccttaatacaagttaaggaagaacctccaaattcattg
cttggtgaaatttctggagcaggcagttctggaatattaaacacatattctctgaatagt
gttctacagtcagaatcaaaatgtgataaggggaatttatataatttctctaagctgaag
aaaagcagaaagtggctaaagagcattctgctaagtaatgaatccagctaggctgattct
caaagtgaagatgatgatgaggaagaagaactcagtctcagcagagaagaacttcacaac
atgcttcgactacacaaatataagaaagttcaccaaaataagtatagtaaagacaaggag
ttgcagcagtatcagtactacagtgcaggcctgctctccacatatgaccctttctatgag
acacaacgacacctacgtggaccaaaaaaaaagaaattcaaggaggaaaagaaacttaaa
gctaagttgaaaaaagtgaagaaaaaaagacgaagagatgaagaactttcctctgaagaa
tcccctcggcgccatcaccaccagaccaaagtctttgccaagttttctcatgatgcacct
cctcctggcaccaagaaaaagcacttatccattgagcagcttaatactcgtcgcaggaaa
gtatggctcagcattgtgaaaaaggaactaccaaaggcaaataagcagaaggcttcagct
cataacctgtttctcaccaatagccgaaagcttgctcaccagtgcatgaaggaggtacgt
cgagctgccttgcaggcccagaagaactgtaaggaaaccttgtctcgtgcccaccgcctc
accaaggagatgcttctgtactggaagaaatatgaaaaggtggagaaggagcaccgcaag
agagcagagaaggaagctttggagcagcggaagttagatgaggaaatgcgggaggccaag
aggcaacagcgaaaactcaacttcttaatcacccagacagaactgtatgcccatttcatg
agtcgcaaaagagacatgggtcatgatggtattcaggaagaaatcctaaggaaactggaa
gacagttctacccagagacaaatcgatataggtggaggagtggtagttaacatcacacag
gaggattatgatagtaaccattttaaagcccaagccctgaagaatgctgaaaatgcttat
catattcaccaagctcggacaaggtcatttgatgaagatgcaaaagaaagtcgagcggct
gccctacgggcggcaaacaagtctggcactgggtttggggagagttatagcctggcaaac
ccatctatccgggctggtgaggatattccacagcctacaatttttaatggcaaattgaaa
ggttattagctgaaaggcatgaactggttggccaatctctatgaacagggtattaatggc
attcttgctgatgaaatgggccttggtaaaacagtacagatcattgccctcctggcccat
ctggctgagagagagaacatttggggacctttcttaataatttcacctgcgtctacactt
aacaattggcaccaggagtttactagatttgttcctaaatttaaggtgctaccatattgg
ggaaatcctcatgatagaaaagtcatcagaaggttctggagtcagaagaccctctacact
caggatgcccccttccatgtggttattaccagctatcagctggtggtgcaggttgtaaag
tatttccagtgggtcaagtggcaatacatggtactggatgaggctcaggcgctcaagagt
agttccagtgttcgttggaagatcctcttacagttccagtgtcgaaatcgtcttttgcta
actgggactccaattcagaacaccatggcagagatttgggctctgctgcatttcattatg
ccaacattatttgattcacatgaggaatttaatgaatggttttccaaggacattgagagc
catgcagaaaacaaatccactattgatgagaatcaanncatgattttgaagccatttatg
ctgaggagaatcaagaaagatgtggaaaatgaattatctgacaagattgaaattctaatg
tattgccaactgaccagccgacataagcttttatatcaggtactaaagaacaaaatttcc
attgaggatttattgcagtcttctatgggctctactcaacaagcacagaataccaccagc
agcctcatgaatctggtcatgcagtttaggaaggtgtgtaatcacccagagttatttgaa
cagcaagagacttggtctccatttcataattccttaaagccataccacatttcaaagttt
atctactgtcgtggacagatcagggtcttcaaccattcacgagacaggtggttaagggtt
ctttctccatttgcaccagactatatccaacagtctctctttcacagaaaaggtcttaat
gaagaaagctgtttctctttcctttgctttattgatatatctccagcagaaatggcaaac
ttcatgcttcagggacttttggccagatggttagctcttttcctgtctctgaaagcctcc
tacaggctccatcagctacgctcctggggagagccagaaggggagaaccagcagagatac
ctgagaaacaaggatttccttcttggggttaattttccactctcctttccaaacctttgc
agctgccctttgttaaagtctcttgttttcagcagccactgtaaagcagtgagtggctac
tcagaccagatcatccatcagcagagatcagctacctcctcgctgcatcgctgcctgctc
actgagctgccgtcttttttgtgtgtggccagcccacgagttaccgcagtgccattggat
tcttactacaatgaccgaagtgcagaatatgaacggcgagttctgaaggaaggagggagt
ctggcagccaaggagtgtttgttgaatggggctcctgaactggctgcagactggctgaat
cggcaatcacagttcttcccagagccagccggaggtctgtggagcatcnagcctcagaat
ggctggtctttcatcaggattccaggcaaggagagcctcatcactgacagtggaaagctg
tatgcccttgatgtcctgctgactcggctcaagtctcaagggcatagggtccttatctac
tcccagatgaccaggatgatagacctgctggaggaatacatggtgtataggaagcatacc
tacatgaggcttgatggctcatccaagatctcggagaggcgagacatggttgctgatttt
cagaacaggaatgacatctttgtgttcctgttaagcacacgagctggaggactgggtatc
aatctcactgctgcagacacagtgattttctatgatagtgactggaaccccactgtggat
cagcaggccatggacagggcccatcgcttggggcagacaaagcaggttaccatataccga
ctcatctgtaaaggcaccattgaagaacgcattctgcaaagagccaaggagaagagtgag
attcagcggatggtgatttcaggtgggaacttcaaagcagataccttgaaactcaaagaa
gtggttagtcttcttctagacaacgaagagttgngaaaaaaattgaggctacggcaggaa
gagaaacggcaacaggaggaaaccaaccgagtgaaagagcacaagtggaagcgggaaaag
tatgcggagaagaagaaaaaggaagatgaattggatgggaaaaggagaaaagagggtgtg
aaccttgtgatcccatttgttccctcggctgataactccaacctctctgctgacggagat
gattcttttattagtgtggactcagccatgccaagccctttcagtgagatctccatcagc
agtgagctacacactggctccattcccctggatgagagtagcagtgatatgctggtcatt
gtggatgacccagcctcctcagcccctcaatctagagctaccaactctcctgcatccata
aaaggctccgtctcagacaccgtgaatggaatctccattcaggaaatgccagctgcagga
cgtggtcactcaacccgaagccgaggccgccccaaaggttcaggaagcacagccaaagga
gcagggaagggcaggagccgaaagtccacagcaggcagcgctgctgcaatggcaggagcc
aaagctggggctgcagcatacgcgtacaacgtgtctaaaggaatctccgccagcagtctg
cagacgtcccttgtccggcctgctggccttgctgactttggaccttcaagcgcctcttct
cctttgagttcccctttgagcaaaagaaacaatgttcctgggactcccaaaaacctccac
atgaccagcagcctagccccagactctctggtccagaaacagggcaaaggcaacccctct
ggaggacggtaa
DBGET
integrated database retrieval system
