Callithrix jacchus (white-tufted-ear marmoset): 100390549
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Entry
100390549 CDS
T03264
Symbol
TRIM35
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM35 isoform X1
KO
K12012
tripartite motif-containing protein 35
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjc04121
]
100390549 (TRIM35)
Ubiquitin system [BR:
cjc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100390549 (TRIM35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-B_box
zf-RING_5
zf-RING_6
Baculo_IE-1
zf-RING_10
BrxB
Prok-RING_4
FapA
SpoIIE
Motif
Other DBs
NCBI-GeneID:
100390549
NCBI-ProteinID:
XP_008977327
Ensembl:
ENSCJAG00000019863
UniProt:
A0A5F4WL92
LinkDB
All DBs
Position
13:11257590..11276540
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AA seq
511 aa
AA seq
DB search
MEPSPDVSPGPSRSFKEELLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVC
KDRASPADLRTNHTLNNLVEKLLQEEAEGARWTGYRFQRVCRLHRGQFSLFCLEDKELLC
CSCQADPRHQGHRLQPVKDTAHDFRAKCRNMEHALREKAKAFWAMRRSYEAIAKHNQVEA
AWLEGRIRQEFDKLREFLRVEEQGILDAMTEETRQKQLLAEEKMKQLTEETEALAHEIER
LQMEMKEDDITFLMGIGSVVLPGTQSAFRNDLKHKGRKRRLFCTMEPEPVQPGMLIDVCK
YLGSLQYRVWKKMLGSVECVPFTFDPNTAAGWLSVSEDLTSVTNHGYRVQVENPERFSSA
PCLLGARVFSRGSHAWEVALGGLQSWRVGVVRVRQDSGAEGHSHSCYHDTRSGFWYVCRT
QGVEGDHCVTSDPATAPLVLAIPRRLRVELECEEGELSFYDAERHCHLYTFHARFGEVRP
YFYLGGARGAGPPEPLRICPLHISIKEELDG
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgagccccgacgtgtcccctgggccttcccgctccttcaaggaggagttgctc
tgtgctgtctgctacgaccccttccgcgatgccgtgactctgcgctgcggccacaacttc
tgccgcgggtgcgtgagccgctgctgggaggtgcaggtgtcgcccacctgcccggtgtgc
aaggaccgcgcctcgcccgccgacctgcgcaccaaccacaccctcaacaacctggtggag
aagctgctgcaggaggaggccgagggcgcgcgctggaccggctaccgcttccagcgcgtc
tgccgcctgcaccgtggccagttcagcctcttctgcctcgaagacaaggagctgctgtgc
tgctcctgccaggccgacccccggcaccaggggcaccgcctgcagccagtgaaggacact
gcccacgactttcgggccaagtgcaggaacatggagcatgcgctgcgggagaaggccaag
gccttctgggccatgcggcgctcctatgaggccatcgccaagcacaatcaggtggaggct
gcatggctggaaggccggatccggcaggagtttgataagcttcgtgagttcttgagagtt
gaggagcagggcattctggatgccatgaccgaggagacaaggcagaagcagcttctggct
gaggagaagatgaagcagctcacagaggagacagaggcgctggcacatgagatcgagcgg
ctgcagatggagatgaaggaggatgatattacttttctcatgggaattgggagtgttgtc
ttgcccggtacccagagtgctttcaggaatgatttgaaacataagggccgaaaacgccga
ctcttctgcaccatggagcccgagccagtccagcccggcatgcttatcgatgtctgcaag
tacctgggctccctgcagtaccgagtctggaagaagatgcttggatctgtggaatgtgtg
ccctttacctttgaccccaacaccgcagccggctggctctctgtgtccgaggaccttacc
agtgtcaccaaccacggctaccgcgtgcaggtggagaacccggagcgcttctcctcggcg
ccctgcctgctgggtgcccgcgtcttctcgcggggctcgcacgcctgggaggtggccctg
ggggggctgcagagctggcgggtgggggtggtgcgtgtgcgccaagactcaggcgctgag
ggtcactcgcacagctgctaccacgacacgcgctcgggcttctggtatgtgtgccgcaca
cagggcgtggagggggaccactgcgtgacctcagacccagccaccgcgcccttggtcctg
gccatcccacgccgcctgcgtgtggagctggagtgtgaggagggtgagctgtctttctat
gatgcggagcgccattgccacctgtacaccttccacgcccgctttggggaggtgcggccc
tacttctacctgggaggtgcgcggggagctggtccccctgagcctttgcgcatctgccct
ctgcacatcagcatcaaggaagaactggatggctga
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