Callithrix jacchus (white-tufted-ear marmoset): 100390854
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Entry
100390854 CDS
T03264
Symbol
DHX34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100390854 (DHX34)
Enzymes [BR:
cjc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100390854 (DHX34)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
100390854 (DHX34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_DHX34
HA2_C
Helicase_C
OB_NTP_bind
DEAD
HA2_N
AAA_22
nSTAND3
ResIII
AAA_19
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
100390854
NCBI-ProteinID:
XP_002762250
Ensembl:
ENSCJAG00000011504
LinkDB
All DBs
Position
22:39878787..39908226
Genome browser
AA seq
1163 aa
AA seq
DB search
MPPPRTREGRDCRDHPRAPREKEALEKWDWSCPETRRLLEDAFFREEDYIRQGSEECQKF
WTFFERLQRFQNLKTSRKEEKDSGHPKHSIPALADLPRTYDPRYRINLSVLGPDTRGSRE
LGRHLPAERVSEFRRALLHYLDFGQKQAFGRLAKLQRERAALPIAQYGNRVLQTLKEHQV
VVVAGDTGCGKSTQVPQYLLAAGFSHVACTQPRRIACISLAKRVGFESLSQYGSQVGYQI
RFESTRSAATKIVFLTVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLRRLLP
KRPDLKVILMSATINISLFSSYFGNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPR
PFLRVLESIDHKYPPEERGDLLVFLSGMAEISTVLEAAQTYASHTQRWVVLPLHSALSVA
AQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAHLQRLQEFWI
SQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSMGDP
RTFPFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFS
LVEPVLTIAAALSVQSPFTRSAQSSPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERS
RNSRKWCRRRGIEEHRLYEMANLRRQFKELLEDHGLLAGAQAVQAGDSYSRLQQRRERRA
LHQLKRQHEEGAGRRRKVLRLQEEQDGGSSDEDRAGPAPPGAGDGVDIQDVKFKLRHDLA
QLQAAASSARDLSREQLALLKLVLGRGLYPQLAVPDAFNSSRKDSDQIFHTQAKQGAVLH
PTCVFAGSPEVLHIREPEAGSCDGSRDDQKMSSKYQLLSFVSLLETNKPYLVNCVRIPAL
QSLLLFSRSLDTNGDCTRLVADGWLELQLADSESAVRLLAASLRLRARWESALDRQLVHQ
ARQRLEEEEEEEEPVSPKEVVVLSKELLQFTASKLPYSLRRLTGLEAQNLYVGPQTIPVT
PHLPGLFGSSTLSPHPTKGGYAVTDFLTYNCLTSDTDLYSDCLRTFWTCPHCGLHAPLTP
LERIAHENTCPQAPQEGPPGAEEAAPETLQKTSVMQRPYHCEACGKDFLFTPTEVLRHRK
QHVRATPGAPPASPQSPHPPAQD
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcctagaacaagggagggcagggattgcagagaccacccccgggctccccgt
gagaaagaggccctggagaagtgggactggagttgtccagagacacgtcgcctcttggaa
gatgccttcttccgtgaggaggattatatccgtcagggttctgaggaatgtcagaagttt
tggaccttctttgaacgcctgcagagattccagaatctcaaaacctccaggaaggaggag
aaagactccgggcatcccaagcacagcatcccagccctggccgacctacctcgcacttac
gacccacgttaccgcatcaacctctctgttctgggccctgacacgcggggctctcgggag
ctgggcaggcacttgcccgccgagagagtgtctgagttccgccgagccctgttgcactac
ctggactttggccagaagcaggcctttgggcgtctggctaagctgcagcgtgagcgggcg
gccctccccattgcccagtacgggaaccgcgtcctgcagacactgaaggaacaccaggtg
gtggtggtggctggtgacaccggctgtggcaagtccactcaggtgccccagtacctgctg
gctgctggcttcagtcacgtggcatgcacccagccccggcggatcgcctgcatctcactg
gccaagcgtgtcggctttgagagcctcagtcagtatggttcacaggtcggctaccagatc
cgctttgagagcacgcgttctgcggccaccaagattgtgttcctgacggtggggctgctc
ctgcgacaaatccagcgggagcccagcctgccccagtacgaggtcctgatcgtggatgaa
gtccacgagcggcacctccacaatgacttcctcctgggcgtcctccggcgcctgctgccc
aagcggcctgacctcaaggtcatcctcatgtcggccaccatcaacatctcgctcttctcc
agctattttggcaatgccccggtggtacaggtgcccgggaggctgttccccatcacggtt
gtgtaccagccgcaggaggcggagccaaccacatccaagtcggagaagctggacccgcgg
cctttcctgagggtgctggagtccattgaccacaagtacccgcctgaggagcggggtgac
ctccttgtcttcctcagcggcatggcggagatcagcactgtactggaagctgcccagacc
tatgccagccacacccagcgctgggtggtgctgccgctgcacagtgccctgtctgtggcc
gcccaggacaaggtgtttgatgtggcaccccctggagtccgaaaatgcatcctctccacc
aacattgctgagacctcagtcaccattgacgggatccgctttgtagtagattctgggaag
gtgaaggagatgagctacgacccgcaggcccatctgcagcggctgcaggagttctggatc
agccaggccagcgcagagcagcggaaaggccgggcgggccgcacgggccccggagtctgc
ttccgcctctatgccgaatcggactatgatgccttcgccccctatcctgtcccggaaatt
cggagggtggccctggactcactggtgctgcagatgaagagcatgagcatgggggacccc
cgaaccttccccttcattgagcccccaccaccagccagcctggaaaccgctatcctctac
ctccgggaccagggagccctggacagctcagaggccctcacgcccatcgggtccctgctg
gcccagctgcctgtggacgtcgtgattgggaagatgctgatcctgggctccatgttcagc
ctggtggaacctgtgctcaccatcgcagcggcgctcagcgtccagtcgcccttcacccgc
agtgcccagagcagcccggagtgtgcagcagcaaggcggccactggagagcgaccagggt
gaccctttcaccctcttcaatgtcttcaacgcctgggtgcaggtaaaatctgaacggagc
agaaactcccgcaagtggtgccgccgccggggcatagaggagcaccgactgtacgagatg
gccaaccttcggcgccagttcaaggagctgctggaggaccacgggctgctggctggggct
caggccgtgcaggcaggggacagctacagccggctgcagcagcgccgcgagcgccgggcc
ctgcaccagctgaaacgccagcatgaggagggcgcggggcgcaggcgcaaggtgctgcgg
ctgcaggaggagcaggacggcggctccagcgacgaggaccgggccggcccagcaccccca
ggagccggcgatggcgtggacatccaggatgtgaagttcaagcttcggcatgacctggca
cagttgcaggccgctgccagctcagcccgggacctgagccgggagcagctagccctgctg
aagctggtgctgggccggggcctgtacccgcagctggccgtccctgacgccttcaacagc
agccgaaaggactcagaccagattttccacacgcaggccaagcagggtgccgtgctgcac
cctacctgtgtctttgctggcagccctgaggtgctgcacatacgggagccggaggctggc
agctgcgatggaagccgagacgaccagaagatgagcagcaaataccagctcctcagcttt
gtgtccctgctggagaccaacaagccgtacctggtgaactgcgtccgcatccctgccctc
cagtccctcctgctgtttagccggtccctggacaccaacggtgactgcacccgcctggtg
gccgatggctggctggagctacagctggcagacagcgaaagtgccgtccggctcctggcg
gcttccctgcggctccgtgcccgctgggaaagcgccctggataggcagctggtgcaccag
gcccgacagcggctggaggaggaggaggaggaggaggagcctgtcagccccaaggaggtg
gtcgtcctgagcaaggaactgctgcaattcacagcatccaagcttccctacagcctccgg
cggctcacggggctcgaagcccaaaacctgtatgtgggaccccagaccatcccagtcacc
ccccatcttcctggcctctttggcagctccaccctgtcccctcaccccaccaaggggggc
tacgcagtcaccgacttcctcacctacaactgcctcacgagtgacacggacctgtacagc
gactgtctccgaaccttctggacctgcccccactgtggcctgcacgcacccctcacgccc
ctggagcgcatcgcccatgagaacacctgcccccaggccccacaggaggggcccccaggg
gctgaggaagctgcccccgagaccctccagaagacgtctgtcatgcaaaggccctaccac
tgcgaggcctgcgggaaggacttcctgttcacacccaccgaggtgctgcgtcaccggaag
cagcacgtgcgagccacaccaggagcaccacccgcctccccacagtctccccaccctccg
gcccaggactag
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integrated database retrieval system
