Callithrix jacchus (white-tufted-ear marmoset): 100391050
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Entry
100391050 CDS
T03264
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X2
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100391050 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjc03041
]
100391050 (DDX46)
Enzymes [BR:
cjc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100391050 (DDX46)
Spliceosome [BR:
cjc03041
]
Complex A
U2 snRNP components
U2 related factors
100391050 (DDX46)
Complex B
100391050 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
100391050
NCBI-ProteinID:
XP_002744211
Ensembl:
ENSCJAG00000005697
LinkDB
All DBs
Position
2:31220412..31288315
Genome browser
AA seq
1031 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERERSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRS
KEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK
KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQDVMQQATNAILRGGTILAPTVSAKTIAEQL
AEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRISE
YSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSY
QPTNKGRYKVL
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgggagtcacgccactatcgaaaacgatcagcatcacggggacgctctggaagt
cggtctaggagtcgctcaccctcagacaaaagaagtaaacgtggagatgacagacggtct
agaagtagagatagagataggaggagagagaggtctcgtagcagagataaaagaagatct
cggtcaagggacaggaagcgactgaggcgttccagaagtagagagagagagagaagccgg
gagcgaagaagatctcgaagtagagacaggagacgctcaaggagtagaagccggggccgg
cgatcccgatcctccagtcctggcaataaaagcaagaaaactgagaatagatctaggtcc
aaagagaaaaccgatggtggggaaagttctaaagagaagaaaaaagacaaagatgacaag
gaggatgagaaagaaaaagatgctggtaactttgaccagaataagctggaagaagaaatg
agaaagcgaaaagaaagagtagaaaaatggcgcgaagagcaacgtaaaaaggctatggaa
aacataggagaactgaaaaaggaaatcgaagagatgaaacaagggaaaaagtggagttta
gaggacgatgatgatgatgaagatgatcctgcagaagctgaaaaggaaggaaatgaaatg
gagggtgaggagttagatccattagatgcttacatggaagaagtgaaagaggaagtaaaa
aaatttaacatgagaagtgtaaaaggtggtgggggaaatgaaaagaagtctggaccaaca
gtcacaaaagttgtcactgttgtgacaaccaaaaaagcagttgtagattccgataagaag
aaaggtgaactgatggagaatgaccaggatgccatggagtattcttcagaggaggaagaa
gttgatcttcagacagctcttacagggtatcaaacaaaacaacgaaagcttctagaacca
gtcgatcatggaaaaattgaatatgaaccatttaggaaaaacttctatgttgaagttcca
gaactagcaaaaatgtctcaagaagaggtaaatgtatttcgattggaaatggagggcatt
acagtcaaaggaaaaggttgccccaagccaattaagtcttgggtacagtgtggaatttcc
atgaagatcttaaattccctcaaaaagcatggctatgaaaagcccacgcccatccaaacc
caagctattcctgctataatgtctggacgagatttgattggcattgccaaaacaggaagt
ggaaagaccattgcttttcttttgcccatgtttagacacatcatggatcagaggtcatta
gaagaaggagaagggccaatagctgtcatcatgactccaactcgagaactggctttacag
attactaaagagtgtaagaagttttccaagactttgggacttagagtggtctgtgtttat
ggaggaacaggaatcagtgagcagattgctgagctgaaaagaggtgctgaaattattgtt
tgcacacctggtcgaatgattgacatgttagcagctaacagtggtcgggtcacaaatctt
cgaagagtgacatatgtcgttttagatgaagcagacagaatgtttgacatgggatttgag
ccccaggtcatgcgcattgtggataatgttcgtcctgatcgacagacagttatgttttca
gctactttccccagagctatggaggctttggctcgcagaatcctgagtaaacctattgaa
gtgcaggttggaggcaggagtgtggtttgctcagatgtggagcagcaagtgattgtgatt
gaagaagaaaagaaatttttgaagttacttgagcttctaggccattatcaagagtcagga
tctgtcattatatttgtggataagcaggaacatgctgatggtcttctgaaggatttaatg
agagcatcttatccttgtatgtctcttcatggaggcattgatcaatatgacagagatagc
atcataaatgactttaagaatgggacctgcaaacttcttgtggctacctctgttgctgcc
cgaggtctagatgtgaaacatctgattcttgtagtaaattatagctgccccaatcattat
gaggattatgtgcacagagcagggcggactggaagagcaggcaacaagggttatgcttat
acttttatcacagaagatcaagctcgctatgctggtgacataattaaagctcttgaattg
tcagggactgcagtgcctcctgatttagagaaactgtggagtgatttcaaagatcaacag
aaagctgaagggaaaataattaaaaagagtagtgggttctctggtaagggattcaagttt
gatgaaacagaacaagctttggctaatgagaggaagaagttacaaaaagcagctcttggt
ctgcaagattcagatgatgaggatgctgcagttgatattgatgagcaaattgaaagcatg
tttaattcaaagaagagagtaaaggatatggctgcccctggaacatcaagtgttcctgct
ccaactgcaggaaatgctgagaaattagaaattgctaagagattggctcttagaatcaat
gctcagaagaatttgggcatcgagtctcaggatgtgatgcaacaggccaccaatgcaatt
cttagaggtggcaccattctggctcccacggtgtctgcaaaaaccattgcagaacaactt
gctgaaaagatcaatgccaagctcaattatgtgcctttagagaaacaagaagaagagaga
caggatggtggacagaatgaatcttttaagagatatgaagaagaattagagatcaatgac
ttcccacagactgctagatggaaagttacctctaaggaagctctacagagaatcagtgaa
tactctgaagctgcaattacaatcagaggaacatatttccctcctggcaaagaacccaag
gagggcgagcggaagatttacttggcaattgaaagtgccaatgaactggctgtgcagaaa
gcaaaggcagaaatcacccggctcataaaagaagaactgatccgtctgcaaaattcatat
caaccaacaaataaaggaagatacaaagttctataa
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integrated database retrieval system
