Callithrix jacchus (white-tufted-ear marmoset): 100391168
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Entry
100391168 CDS
T03264
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100391168 (SOX30)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100391168 (SOX30)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100391168
NCBI-ProteinID:
XP_035139321
UniProt:
F7IMY9
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Position
2:complement(18472438..18550323)
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AA seq
754 aa
AA seq
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MERARPEPPPQPRQLPRVPLPRPLRPAPPPLPVEGASFWAAAGDPPPSPPTPGVAAIATL
ASSCGEAARRLVQVNPEQVLLLPQPQAGDEDGAASPAQARVLQFRPDLLLLPSPAASEGA
PFRPELHPVQPRVLHVKAEKQELGPGLDPSVGPQGAVETGPRASRAVKVEGRGPALDYLR
RNEKGKLETEAVVRDAMQGRESKSPVATLGVIKTEEPERLLEDCRLRAEPASDDLVHGSA
EVILAPPTGAFGPHQQDLRIPLTLHTISPGARIQFQGAPPSELIRLTKVPLTPVPIKMQS
LLEPSVKIDTKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANP
AANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRPGKRKRFPLSV
SNVFSGTTQNIITTNPSTVFPYRSPTYSVVIPSLQNPITRPVGETSPTIQLPTPAVQRPS
PVTLFQPSISSAAQVAVQEDPSLPLHPALPPQRFAGPSQTDTLRLHSEATHTVKRPTPVS
LENPNRISTSASTAHARFATSTIQPPKEYSSVSACPRSAPIPQAPPIPHPHVYQPPPLGH
PATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSMPECLGYYEDTYQKH
EAIFSALNREFPFRDYQNERTHSENSRSREDINGTSYCNSHSHSGEEYLNPVPQVDIGTL
ENVFTAPTSTPSSIQQVNVTDSDEEEEEKVLRNL
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaggccggagccgccgcctcagccgcgccaactgccgcgggtccctcta
ccgcgtccgttgcgtcccgctccgcccccgctgccggtcgagggcgcctccttttgggca
gcggccggggacccccctccgtcgccgcccacaccgggcgtggcagccattgcgacactg
gcttcctcgtgcggggaggcggcgcggcggctggtgcaggtgaacccggagcaggtgttg
ctgttaccacagcctcaggccggggacgaagacggcgccgcctcgcccgcgcaggcgcgg
gtgctgcagttcaggcccgacctgctgctcctgccgtcgccggccgcgtccgagggcgcc
cccttcaggcccgagttgcacccggtgcagccgcgggtgctccatgtcaaggccgagaag
caggagctggggcctggcctggatccgtcggtggggcctcaaggggcggtggagaccggc
cctagagcctccagggcggtcaaggtggaaggccgtgggcccgccctcgactacttgcga
aggaacgagaagggcaagctggagacggaggcggtcgtgcgggacgcgatgcaaggcagg
gaaagcaaaagcccagtggccaccctaggtgtgatcaaaaccgaggaaccggagagactc
ctggaggactgcaggctccgcgccgagcccgcgtctgatgacctggttcatggcagcgcg
gaggtcatcctggccccgccgaccggtgcctttgggccgcaccaacaagacctgaggatc
cctttgactctccacaccatttcccctggggcccggatccagttccagggagctccgcct
tcagagctgataagattgaccaaggtccccctgacaccagtgcctattaaaatgcagtcc
ttactggagccttctgtaaaaattgataccaaagatgtcccgctcaccgtgctgccctca
gatgcaggcataccagatactcccttcagtaaggacagaaatggtcatgtgaagcgaccc
atgaatgcatttatggtttgggcaaggatccaccgaccagcactagccaaagccaaccca
gcagccaacaatgcagaaatcagtgtccagctcgggttagagtggaacaaacttagtgaa
gaacaaaagaaaccctattacgatgaagcacaaaagattaaagaaaagcacagagaggaa
tttcctggttgggtttatcagcctcgtccagggaagcgaaaacgcttccctctaagtgtt
tccaatgtattttctggtaccacacagaatatcatcactacaaatccttcaacagttttt
ccttatcgctcacctacatactctgtggtaattcccagcctgcagaatcccatcactcgt
ccagttggtgaaacctcacctaccatccaactgcccacacctgcagtccagcgcccaagc
cctgtcacacttttccagcccagcatctccagtgctgctcaggtggccgtccaagaggat
ccaagtctgcctctgcacccagcactcccaccccaacgatttgctgggccttcccaaact
gatacccttcggctgcattctgaagccactcacactgtgaagcgacccacccctgtctct
ctagagaatcccaacaggatttcaactagtgcaagtactgcccatgccagatttgcaact
tcgaccatccaacctcctaaggagtattccagcgtttctgcttgcccaagaagtgctccg
atcccccaggctcctcccattccacacccacatgtctaccagccccctcccctgggccat
ccagccacactgtttgggacaccaccaagattctcttttcatcacccttactttctaccg
ggacctcactacttcccatcaagcacgtgcccttatagtcgacctccctttggctatgga
aattttccaagttcaatgccagaatgccttggttattatgaagacacgtaccaaaaacat
gaggccatattttcagctttaaatagagagtttccttttagagactaccaaaatgaacgc
acacacagtgaaaattctcggagtcgtgaggacataaatggaacctcttactgtaacagt
catagccacagtggggaagaatacttaaaccctgtgcctcaggtggacattggaaccttg
gagaatgtcttcacagccccgacatcaactccttctagcatccagcaagtcaatgtcact
gatagtgatgaggaggaagaagaaaaagtactcaggaatttataa
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