Callithrix jacchus (white-tufted-ear marmoset): 100391650
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Entry
100391650 CDS
T03264
Symbol
TCOF1
Name
(RefSeq) treacle protein isoform X1
KO
K14562
Treacher Collins syndrome protein
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100391650 (TCOF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cjc03009
]
100391650 (TCOF1)
Ribosome biogenesis [BR:
cjc03009
]
Eukaryotic type
90S particles
Other 90S particles
100391650 (TCOF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Treacle
Gal-3-0_sulfotr
Motif
Other DBs
NCBI-GeneID:
100391650
NCBI-ProteinID:
XP_035144326
Ensembl:
ENSCJAG00000020993
LinkDB
All DBs
Position
2:47138266..47179811
Genome browser
AA seq
1562 aa
AA seq
DB search
MAEARKRRELLPLIYHHLLRAGYVRAARAVKEQSGQKCFLAQPVTLLDIYTHWQQTSELG
RKRKAEEDAALQAKKTRVSDPISTSESSEEEEEAEAETTKATPRLTSTNSSVMGADLTSS
MKEKAKAETEKAGKTGNSMPHPATGKMVAHLLSGKSPRKSAEPSANTTLVSETKKELSNP
AFGAAAKPGMVSTGQAGSSSEDTSSSSDETDVEGKPSVKPAQVKASVSTKESPARKAVPA
LGKVGDVTPQVSGGALPPSRRAKKPEEESESSEEGSESEEEAPAGTPSQVKASEKILQVR
AASAPAKGTSGKVAAPAPTGKAGPLASQSKTGKPEEDSESSSVESSDSEEEISAAKVLLQ
ASAKTPQVRAVSAPAKESPRKGAAKAQAVKQEKDSESSSEESDSEEEAPARVKPSGKTPQ
VRAALAPTKESPRKGAAPTPPGKTVTAAAQAQVGNGEEDSGSSSEESDSDEEAPAAMSTA
QVKPLGKNPQVRPASTVGTGPLGKGTGPVLPGKVAKKEEELESSSEESSDSDDGEVPIAV
APAQEKSLGKILQAKPASVPAKGPLGRGAAPVPPQEAGPVAIQVKAEKPTEDSESSEESS
DSEEAPAAVTAAQAKPALKAPQTKACPKKTSTTVSAKVAPVQVGAQASRKAGSATSAGSS
PAVAWGAQRPAEDSSSSEESDSEEEKTGPAVTTGQAKSVGKGLQVKAASVPVKGPLGQGT
APLLPGKTQPSLTQVKAEMQEDSESSEEESDSEEAATTPAQVKTSVTKNQAKANPAATRA
SSAKGTIAAPGKVVSATAQAKQRSPAKVKPQARNPQNSAVLVRGPASVPPVGKAVAQTGP
EEDSGSSEEESDSEEETMEMPAQMKPSGKNPQVRAALAPAKESPRKGAGPAPPGKTGPLT
TQAGRQKDDSGSSSEESDSDGEALAAVTSAQVLSPQKGGNSKPARSKTLVPTPPERNMEE
SSESSEEELPLTQVIKPPLIFVDPNRSPAGPAATPAQAQAPSTPRKARASESTARSSSSE
SEDEDMISATQCLTPAIRTNVVTVPTAHPRIAPKASTARASSNKESSRISDGKKQEGPAT
QVSKKNPTSLPLTQAALKVLAQKASEAQPPVARTQPSSGVDSAVGTFPATSPQSTPVQAR
GTNKLRKPKLPDGQQAAKAPGSSDDSEDSSDSSSGSEEDAEGPQVAKSAHRLVGPTPSRT
ETLVEETTAESSEDDVVAPSQSLLSGYVTPGLTLANSQASKATPKPDSNLSVSSALATKD
DPDSKQEAKLQQAADTLSPKTGGKEAVSDTRPQKSQKPKKGAGIPQASTLALQSNIAQRL
LGQPWPLSEAQVQASVMKVLTELLEQEKKKAADVTKESSRKGWESRKRKLSGDQPAARNK
KKKLGAGEGGEASVSPEKASMTSKGKAKRDKASGGIKEKKGKGPLGSQGVKDKPEEELQK
GMGKVEGGDQSNPKSKKEKKKSDKRKKDKEKRGKKKKAKKASTKDPESLSQKKKKKKEED
TRADCMMGISTSHRDFSIRVVTIPLPLTSADLCSPWVGNRLLPSPRSTEDSQLQGSLYWP
SQ
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggccaggaagcgacgggagctacttccccttatctaccaccatctgctgcgg
gctggctatgtgcgcgcggcgcgggcagtgaaggagcagagtggccagaagtgtttcctg
gctcagcccgtaacccttctggacatctatacacactggcaacaaacctcagagcttggc
cggaagcggaaggcagaggaagatgcggctctacaagctaagaagacccgagtgtcggac
cccattagcacctcagagagctcggaagaggaagaggaggcagaagctgaaaccaccaaa
gccaccccaagactaacatctaccaactcctcagtcatgggggcggacctgacatcaagc
atgaaagagaaagccaaggcagagacagagaaagccggcaagactgggaactccatgcca
caccctgccactgggaagatggtggcccaccttctctctgggaagtctcccaggaagtca
gcagagccctcagcaaatactacgttggtctcagaaaccaagaaagagctcagcaacccg
gcttttggagctgctgccaagcctgggatggtgtcaacgggccaggccggcagctccagc
gaggacacttccagctccagcgatgagacagatgtggaggggaaaccctcagttaaacca
gcccaggtcaaagcctcagtttctaccaaggaatctccagcaagaaaggcagtcccagcc
cttggaaaggtgggggatgtgacaccccaagtcagcggaggggccttgcctccatccagg
agggccaagaagccagaagaggagtcagagagtagcgaggaggggtctgaaagcgaggag
gaggcccctgcagggacaccaagccaggtaaaggcctctgagaaaattctccaggtcaga
gctgcctctgcccctgccaaggggacctctgggaaagtggctgccccggcacccactggg
aaggcagggcctctagcctcccagtccaagacaggaaagccagaggaggactcagagagc
agcagtgtggagtcatctgacagtgaggaggagatatcagctgccaaggtcctgcttcag
gcctcagcaaaaacccctcaggtcagagctgtctcagcccctgccaaggagtcccccagg
aaaggagctgccaaggcccaggcggtgaagcaggagaaggactcagagagcagcagtgag
gagtcggacagtgaagaggaggcgcctgctcgggtgaagccttcagggaagaccccccag
gtcagagctgccttggcccctaccaaggagtcccccaggaaaggggctgccccaacgccc
cctgggaagacagtgactgcagctgcccaggcccaggtggggaatggggaggaggactct
gggagcagcagtgaggagtcggacagtgacgaggaggcacctgcagccatgagcacagct
caggtgaagcccttggggaaaaacccccaggtgagacctgcctccactgtgggcacagga
cccctggggaaaggcaccggcccagtgctacctgggaaggtggcgaagaaggaggaggag
ttagagagcagcagtgaggagtcatcggacagtgatgatggagaggtgcccatagctgtg
gccccagctcaggaaaagtcattggggaaaatcctccaggctaaacctgcctcagttcct
gccaaggggcccttgggaagaggggctgccccagtgccccctcaggaggcagggcctgta
gccatccaggtcaaggctgaaaagcccacagaagactcagagagcagtgaggagtcgtca
gacagtgaggaggcaccagcagccgtgactgcagctcaggcaaaaccagctctgaaagct
cctcagaccaaggcctgcccaaagaaaaccagtaccactgtatctgccaaggttgcccct
gtgcaagtgggtgcccaagcctcccggaaagcaggaagtgcgacttcagcaggctcatcc
ccagctgtggcctggggtgcccaaagaccagcagaggactcttcaagcagtgaggagtca
gatagtgaggaagagaagacaggtcctgcagtaaccacgggacaggccaagtctgtgggg
aaaggcctccaagtgaaagctgcctcagtgcctgtcaaggggcctttggggcaagggact
gccccactactccctgggaagacgcagccttcactcacccaggtgaaagctgagatgcag
gaagactctgagagcagtgaggaggaatcagacagtgaggaggcagccacgactcctgca
caggtgaaaacctcagtaacaaaaaaccaggccaaagccaacccagctgccaccagagca
tcttcagcaaaagggacaattgcagctcctggaaaagttgtcagtgcaactgctcaagcc
aaacagagatctccagccaaggtaaaaccacaagcaagaaacccccagaacagtgccgtc
ttggtgaggggcccagcatctgtgccacctgtggggaaggcagtggcccagacagggcca
gaggaggactcagggagcagtgaggaggaatcggacagtgaggaggagacgatggagatg
ccagctcagatgaagccttcagggaagaacccccaggtcagagctgccttggcccctgcc
aaggagtcccccaggaaaggggctggcccagcacctcctgggaagacagggcctttgacc
acccaggcgggaaggcagaaggatgactcagggagcagcagtgaggagtcggacagtgac
ggggaggcactggccgctgtgacctctgcccaggtcttgtcccctcagaagggtggtaac
tccaaacctgccagaagcaagaccctggtcccaactcctccagagaggaacatggaggag
tcctcagagagcagtgaggaagagctgccactgacacaggtgattaaaccccctctgatt
tttgtcgaccctaatcgtagtccagctggcccagctgctacccccgcacaagcccaggct
ccgagcacaccgaggaaggcccgagcctcggagagcacagccaggagttcctcctctgag
agcgaggatgaggacatgatctccgctacacagtgcttgactcctgccattagaaccaac
gtggtgactgtgcctactgcccacccaaggatagcccccaaagccagcacagctagggcc
agcagcaacaaggagtccagtcggatatcagatggcaagaaacaggagggaccagccact
caggtgtcaaagaagaacccaacttccctcccactgacccaggctgccctgaaggtcctc
gcccagaaagccagtgaggctcagcctcctgttgccaggacccaaccttcaagtggggtt
gacagtgccgtgggaaccttccctgcaacgagtccccagagcacccccgtccaggccaga
gggaccaacaagctcagaaaacctaagcttcctgatggccagcaggccgccaaagcccct
gggagctcagatgacagtgaggacagcagcgacagctcttcagggagcgaggaagatgct
gaagggcctcaggtggccaagtcagcccacaggctagtaggtcccaccccctccaggacg
gagaccctggtggaggagaccacagcagaatccagcgaggatgatgtcgtggcaccatcc
cagtctctcctctcaggttatgtgacccctggactaaccctggccaattcccaggcctca
aaagccactcccaagccagactccaacctttcagtttcctctgctctggccaccaaagat
gacccagatagcaagcaggaggcaaagctccaacaagcagcagacaccttgtcccctaaa
acaggtggaaaagaggctgtctcagacaccagacctcagaagtcccagaagcccaagaaa
ggggctgggatcccccaggcctcaactctggcactgcaaagcaacattgcccagcgcctc
ctgggccaaccctggcccctgagcgaggcccaggtgcaggcctcggtgatgaaggtcctg
actgagctgctggagcaggaaaaaaagaaggcggcggatgtcaccaaggagagcagcagg
aagggctgggagagccgcaagcggaagctgtctggagaccagcctgctgcgaggaacaag
aagaaaaagctgggggccggagaaggtggggaggcctctgtctctccggaaaaggcctcc
atgacttccaagggaaaagcaaagagagacaaagcaagtggtggcatcaaggagaagaag
gggaaggggcctcttggctcccaaggggtgaaggacaaaccagaagaggagcttcagaag
gggatggggaaggttgaaggtggagatcaaagcaacccaaagagcaagaaggagaagaag
aaatcggacaagagaaaaaaagacaaggaaaaaaggggaaagaagaagaaagcaaaaaag
gcctcaaccaaagatcctgagtcactatcccagaagaaaaagaaaaaaaaagaagaagac
accagagcagactgtatgatgggcatcagcacaagtcacagggatttttctatccgagtg
gtgaccatccccctgcctctgacctccgcggacctctgctcaccatgggttggaaataga
ttgttaccttcccctcgctccacagaagatagccagctgcaggggtccctgtactggcca
agccagtga
DBGET
integrated database retrieval system
