KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100392057
Entry
100392057         CDS       T03264                                 
Symbol
TRIM25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
  KO
K10652  tripartite motif-containing protein 25 [EC:2.3.2.27]
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04064  NF-kappa B signaling pathway
cjc04622  RIG-I-like receptor signaling pathway
cjc05164  Influenza A
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    100392057 (TRIM25)
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    100392057 (TRIM25)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    100392057 (TRIM25)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cjc04121]
    100392057 (TRIM25)
Enzymes [BR:cjc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100392057 (TRIM25)
Ubiquitin system [BR:cjc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    100392057 (TRIM25)
SSDB
Motif
Pfam: SPRY PRY zf-RING_UBOX zf-C3HC4_4 zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-C3HC4_3 zf-RING_5 RING_XB3-XBAT31 ANCHR-like_BBOX zf-B_box TACC_C DUF6863 LAMB1 MRP-L47 zf-RING_11
Other DBs
NCBI-GeneID: 100392057
NCBI-ProteinID: XP_035157030
LinkDB
Position
5:105462311..105490053
AA seq 620 aa
MAELCPLAEELSCSICLEPFKEPVTTPCGHNFCGSCLNETWAVQGSPYLCPQCRASYHAR
PQLHKNTVLCNVVEQFLLADLAREQPAADGWTPPARASAPSPGTQVACDHCLKEAAVKTC
LVCMASFCQKHLQPHFESPTFQDHPLQSPIRDLLHRKCPQHNRLREFFCPEHSECICHIC
LVEHKACSPASLSQASADLEATLRHKVTVMYSQINGASRALDDVRARQQDIRLTANKKVE
QLRQEYMEMKALLDTSETTLTWKIKEEEKKVNTKLDSIYQILLKKKSEIQTLKEEIERGL
TKGDEFEFLEKASKLRGISTKPVYIPKVELNHELIKGIYQSTLDLKTELKRCIRQLQEPT
TSSGDPGEHDSASTYKSARPGKKAPKEKKKSKKPSSGLIVESEQDGSEAAATGAKGASSQ
PNAASLKAKVLETFLAKSRPELQEYYVKVILDYNTAHKKVALSQNYTVASVAEMPQNYRP
HPQRFTYCSQVLGLHCYKKGIHYWEVELQKNNFCGVGICYGSMDRQGPESRLGRNNASWC
VEWFNTKISAWHNNVEKTLPSTKATRVGVLLNCDHGFVIFFAVADKVHLMYKFKVDFTEA
LYPAFWVFSAGATLSICSPK
NT seq 1863 nt   +upstreamnt  +downstreamnt
atggcggagctgtgtcccctcgccgaggagctgtcgtgctccatctgcctggagcccttc
aaggagccggtcaccactccgtgtggccacaacttctgcgggtcgtgcctgaacgagacg
tgggcagtccagggctcgccgtacctgtgtccgcagtgccgcgccagctaccacgcgcga
ccgcagctgcacaagaacacggtgctgtgcaacgtggtggaacagttcctgctggccgac
ctggcccgggagcaacccgccgccgacggctggacgccgcccgcccgcgcctccgcaccg
agcccgggcacccaggtggcctgcgaccactgcctgaaggaggccgccgtgaagacgtgc
ctggtgtgcatggcctccttctgccagaagcatctgcagccgcacttcgagagccccacc
ttccaggaccacccgctgcagtcgcccattcgcgacctgctgcaccgcaaatgtccccag
cacaaccggctgagggaatttttctgccctgagcacagcgagtgcatctgccacatctgc
ctggtggaacataaggcctgctctcccgcgtccctcagccaggccagcgccgacctggag
gccaccctgaggcacaaagtaactgtcatgtacagtcagatcaatggggcgtcgagagcg
ctggatgatgtgagggccaggcagcaggatattcggttgactgcaaacaaaaaggtggag
cagctacgacaagaatacatggaaatgaaggctctcctggacacctcagagaccaccttg
acatggaagataaaggaggaggagaagaaggtcaacaccaagttggacagcatttatcag
attctcctcaagaagaagagtgagatccagacgctgaaggaggagattgaacggggcctg
accaagggggatgagttcgagtttctggagaaagcatcaaaactgcgaggaatctcaaca
aagccagtctacatccccaaggtggaactgaaccacgagctgataaaaggcatctaccag
agcaccttagacctcaaaaccgagttgaagcggtgcatcaggcagctccaggagcccacc
accagctcaggtgaccctggagagcatgactcagcgtccacatacaaatctgcacgccct
gggaagaaggccccaaaagagaaaaagaaatccaagaaaccttcttcgggactgatagtg
gaatcagaacaagatggctctgaggcggcagccactggagccaaaggtgccagctcacag
ccgaacgcagcatctctcaaggccaaggtgctggagacctttctggccaagtccagacct
gagctccaggagtattatgttaaagtcatcctggactacaacactgcccacaaaaaggtg
gctctgtcacagaactatacagtagcttctgtggctgagatgcctcagaactaccggccg
catccccagaggttcacatactgctctcaggtgctgggcctgcactgctacaagaagggg
atccactactgggaggtggagctgcagaagaacaacttctgtggggtaggcatctgctat
ggcagcatggaccggcagggccccgagagcaggctcggccgcaacaatgcctcctggtgc
gtggagtggttcaacaccaagatctctgcctggcacaacaacgtggagaaaaccctgccc
tctaccaaggccacacgggtgggcgtgcttctcaactgtgaccacggctttgtcatcttc
tttgctgttgctgacaaggtccacctgatgtataagttcaaggtggactttactgaggct
ttgtacccggctttctgggtgttctccgctggtgccacgctttccatctgctccccaaag
tag

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