Callithrix jacchus (white-tufted-ear marmoset): 100392155
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Entry
100392155 CDS
T03264
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100392155 (CTCF)
03036 Chromosome and associated proteins [BR:
cjc03036
]
100392155 (CTCF)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100392155 (CTCF)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100392155 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
100392155
NCBI-ProteinID:
XP_017822524
Ensembl:
ENSCJAG00000016139
UniProt:
U3BC80
LinkDB
All DBs
Position
20:21711856..21789282
Genome browser
AA seq
727 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDTCHLPQNQTDGGEVVQDVNSSVQM
VMMEQLDPTLLQMKTEVMEGTVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKR
KMRSKKEDSSDSENAEPDLDDNEDEEEPTVEIEPEPEPQPVTPAPPPAKKRRGRPPGRTN
QPKQNQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPAEGEEEEAQPAATDAPNGDLTPEM
ILSMMDR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcggtcgaagccattgtggaggagtccgaaacttttattaaaggaaag
gagagaaagacttaccagagacgccgggaagggggccaggaagaagatacctgccaccta
ccccagaaccagacggatgggggtgaggtggtccaggatgttaacagcagtgtacagatg
gtaatgatggaacagctggaccccacccttcttcagatgaagactgaagtaatggagggt
acagtggctccagaagcagaggctgctgtggacgatacccagattataactttacaggtt
gtaaatatggaggaacagcccataaacataggagagcttcagcttgttcaagtacctgtt
cctgtgactgtacctgttgctactacttcagtagaagaactccagggggcttatgagaat
gaagtgtctaaagagggccttgcggaaagtgaacccatgatatgccacaccttacccttg
cctgaaggttttcaggtggttaaagtgggggccaatggagaggtggagacactagaacaa
ggggagcttccaccccaggaagatcctagttggcaaaaagacccagactatcagccacca
gccaaaaaaacaaagaaaaccaaaaagagcaaactgcgttacacagaggagggcaaagat
gtggatgtgtctgtctatgattttgaggaagaacagcaggagggtctgctgtcagaggtt
aatgcagagaaagtggttggtaatatgaagcctccaaagccaacaaaaattaaaaagaaa
ggtgtaaagaagacattccagtgtgagctttgcagttacacgtgtccacggcgttcaaat
ttggatcggcacatgaaaagccacactgatgagagaccacacaagtgccatctctgcggc
agggcattcagaacagtcaccctcctgaggaatcaccttaacacacacacaggtactcgt
cctcacaagtgcccagactgcgacatggcctttgtgaccagtggagaattggttcggcat
cgtcgttataaacacactcacgagaagccattcaagtgttccatgtgtgattacgccagt
gtagaagtcagcaaattgaaacgtcatattcgctctcatactggagagcgtccatttcag
tgcagtttatgcagttatgccagcagggacacatacaagctgaaaaggcacatgagaacc
cattcaggggaaaagccttatgaatgttatatttgtcatgctcgatttacccaaagtggt
accatgaagatgcacattttacagaagcacacagaaaatgtggccaaatttcactgtcca
cactgtgacacagtcatagctcgaaaaagtgatttgggtgtccacttgagaaagcagcat
tcctatattgagcaaggcaagaaatgtcgttactgtgatgctgtgtttcatgagcgctac
gccctcatccagcatcagaagtcacacaagaatgagaagcgctttaagtgcgaccagtgt
gattatgcttgtagacaggagaggcacatgatcatgcacaagcgcacccacactggggag
aagccttacgcctgcagccactgcgataagaccttccgccagaaacagcttctcgacatg
cacttcaagcgctatcacgaccccaactttgtccctgcggcctttgtgtgttctaagtgt
gggaaaacatttacacgtcggaacaccatggcaagacatgctgataattgtgctggccca
gatggtgtagagggggaaaatggaggagaaacgaaaaagagtaaacgtggaagaaaaaga
aagatgcgctctaagaaagaagattcctctgacagtgaaaatgctgaaccagatctggat
gacaatgaggatgaggaggaacctacagtagaaattgaacccgagccagagcctcagccc
gtgacgccagccccaccacctgccaagaagcggagaggacgaccccctggcagaaccaac
cagcccaaacagaaccagccaacagccatcattcaggttgaagaccagaatacaggtgca
attgagaacattatagttgaagtaaaaaaagagccagatgctgagcccgcagagggggag
gaagaggaggcccagccagctgccacagatgcccccaatggagacctcacgcccgagatg
atcctcagcatgatggaccggtga
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