Callithrix jacchus (white-tufted-ear marmoset): 100392161
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Entry
100392161 CDS
T03264
Symbol
GRIN3B
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B isoform X1
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04020
Calcium signaling pathway
cjc04024
cAMP signaling pathway
cjc04080
Neuroactive ligand-receptor interaction
cjc04082
Neuroactive ligand signaling
cjc04724
Glutamatergic synapse
cjc05017
Spinocerebellar ataxia
cjc05020
Prion disease
cjc05030
Cocaine addiction
cjc05031
Amphetamine addiction
cjc05033
Nicotine addiction
cjc05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
100392161 (GRIN3B)
04024 cAMP signaling pathway
100392161 (GRIN3B)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100392161 (GRIN3B)
04082 Neuroactive ligand signaling
100392161 (GRIN3B)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
100392161 (GRIN3B)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100392161 (GRIN3B)
05020 Prion disease
100392161 (GRIN3B)
09165 Substance dependence
05030 Cocaine addiction
100392161 (GRIN3B)
05031 Amphetamine addiction
100392161 (GRIN3B)
05033 Nicotine addiction
100392161 (GRIN3B)
05034 Alcoholism
100392161 (GRIN3B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cjc04040
]
100392161 (GRIN3B)
Ion channels [BR:
cjc04040
]
Ligand-gated channels
Glutamate (ionotropic)
100392161 (GRIN3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
100392161
NCBI-ProteinID:
XP_054105458
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All DBs
Position
22:689168..699210
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AA seq
1106 aa
AA seq
DB search
MEFVRAPWLGLALALALGSAGGHPQPCGVLARLGGSVRLGALLPRAPLARARARTALVRA
ALAPRLPHNLSLELVFAAPRARDPASLARGLCQALAAPGVAALLAFPEARPELLQLHFLA
AATETPVLSVLRREARAALGAPNPFHLQLHWASPLETLLDVLVAVLEAHAWEDVGLALCH
TRDPGALVALWTSRAGRAPQLVLDLSRQDTGDAGLRARLAPMGAPMGGEAPVSAAVLLGC
DVARARRVLEAVPPGPHWLLGTPLPPKALPTAGLPPGLLALGEVAQPPLEAAIHDAVQLV
ARALGSAAQVQPERALLPAAVNCGDPQPAGPESPGRFLARFLANTSFQGRTGPVWVTGSS
QVHVSRHFKVCSLRRDPQGAPAWATVGRWQDGRLHLEPRGAVARPPPPPGTQARPKLRVV
TLVEHPFVFARDPDEDGQCPAGQLCLDPGTNDSATLDALFAALANDSVPRALRKCCYGYC
IDLLERLAEDTPFDFQLYIVGDGKYGALRDGRWTGLVGDLLAGRAHMAVTSFSINSARSQ
VVDFTSPFFSTSLGIMVRARDTASPIGAFMWPLHWSMWLGVFAALHLTALFLTLYEWRSP
YGLTPRGRNRGTVFSYSSALNLCYAILFGRTVSSKTPKCPTGRLLMNLWAIFCLLVLSSY
TANLAAVMVGDKTFLQLSGIHDPKLHHPAQDFRFGTVWESSAEAYIKKSFPEMHAHMRRH
SAPTTPHGVAMLTSDPPKLNAFIMDKSLLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQN
SPLTSNLSEFISRYKSSGFIDLLHDKWYKMVPCGKRVFAVTETLQMSIYHFSGLFVLLCL
GLGSALLSSLGEHAFYRLALPRIRRGSRLQYWLHTSQVRTRRAAGGPAGHVSSPTGSVWG
LRKSTAPSTRSRHRGRRRRRQRRSPAAPRWSSSSRTRRRLRRAGNGRAGPWTRSAACASC
WSPPWLRRPTRTPRRRRRRGRGLRRQRAPAGCAPMAARQPRSPRAPPSPGSCRSWSAASR
ARGSGSARPWCGAASCWHSSGTARATGLCACFRPGLPPRRRHRTRTDGVAGKEAAAGLPG
IKTHSALGRCRQTVYSIYKPNFVHRN
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgtgcgcgcgccgtggctgggcctggcgctggcgctggcgctggggtccgcg
gggggccacccgcagccgtgcggcgtcctggcgcgcctggggggttccgtgcgcctgggc
gccctcctgccccgcgcgcccctcgcccgcgcccgcgcccgcaccgccctggtccgggcc
gccctggctccgcggctgccgcacaacctgagcctggagctggtgttcgccgcgccccgc
gcccgcgaccccgcctcgctggcccgaggcctgtgccaggcgctggctgctccgggcgtg
gcggccctgctggcctttcccgaggcgcgacccgaactgctgcagctgcacttcctggcg
gccgccaccgagacccccgtgctcagcgtgctccggcgggaggcgcgcgcggccctagga
gccccgaacccattccacctgcagctgcactgggccagccccctggagacgctgctggac
gtgctggtggctgtgctggaggcgcacgcctgggaggacgtcggcctggccctgtgccac
acccgggaccccggcgccctggtggccctctggacgagccgggccggccgcgctccacag
ctggtcctggacctaagccggcaggacacgggagatgcggggctgcgggcacgcctggcc
ccgatgggggcacccatggggggtgaagccccagtatccgcggcggtcctcctcggctgt
gatgttgcccgcgcccgtcgggtgctggaggctgtacctcccggcccccactggctgttg
gggacaccactgccacccaaggctctgcccaccgctgggctgccgccagggctgctggcg
ctgggtgaggtggcacaacccccgctggaggccgccatccatgacgccgtgcagctggtg
gcccgggcgctgggcagtgcggcacaggtgcagccggagcgtgccctcctccccgctgcg
gtcaactgtggggacccgcagccggccggccctgagtcccccgggcgcttcttggcacgg
ttcctggccaacacgtccttccagggtcgcacgggccctgtgtgggtgacaggcagctcc
caggtacacgtgtctcgtcacttcaaggtgtgcagcctgcgccgggacccacagggtgcc
ccggcctgggccacggtgggcagatggcaggacggccggctgcatttggaaccgaggggc
gctgtggcgaggcccccacccccgccaggcacccaggcccggcccaagctgcgtgtggtg
acgctggtggagcacccattcgtgtttgcccgtgatcccgatgaagacgggcagtgcccg
gcggggcagctgtgcctggaccccggcaccaacgactcggccaccctggacgcactgttc
gccgcgctggccaacgactcggtgccccgtgccctgcgcaagtgctgctacgggtattgc
atcgacctgctggagcggctggcagaggacacgcccttcgacttccagctgtacatcgtg
ggcgatggcaagtatggcgccctgcgtgacggtcgctggacaggcctggtcggggacctg
ctggcgggccgggctcacatggcggtcaccagcttcagcatcaactccgcccgctcccag
gtggtggacttcaccagccccttcttctccaccagcctgggcatcatggtgcgggcgcga
gacacggcctcgcccatcggcgccttcatgtggccgctgcactggtccatgtggctgggc
gtgttcgccgccctgcacctgaccgcgctcttcctcaccctgtacgagtggcgcagcccc
tacgggctcacgccgcgcggccggaaccgcggcacggtcttctcctactcctcggcgctc
aacctctgctacgccatcctcttcggacgcacggtgtccagcaagacgcccaagtgcccc
acgggccggctgctcatgaacctctgggccatcttctgcctgctggtgctgtccagctac
acggccaacctggccgccgtcatggtgggggacaagaccttcctgcagctgtctgggatc
cacgacccaaagctgcaccatccggcgcaggacttccgcttcggcaccgtctgggagagc
agcgccgaggcttacatcaagaagagcttccccgagatgcacgcgcacatgcggcgccac
agcgcgcccaccacgccccacggcgtcgccatgctcacgagcgacccccccaagctcaac
gccttcatcatggacaagtccctgctggactacgaggtctccatcgacgcggactgcaag
ctgctgactgtgggcaagcccttcgccatcgagggctatggcatcgggctgccccagaac
tcgccgctcacctccaacctgtccgagttcatcagccgctacaagtcctccggcttcatt
gacctgctccatgacaagtggtacaagatggtgccttgcgggaagcgggtgtttgcggtg
acagagaccctgcagatgagcatctaccacttctcgggcctcttcgtgctgctgtgcctg
ggcctgggcagcgctctgctcagctccctgggcgagcatgccttctaccgcctggcgctg
cctcgcatccgcagggggagccggctgcagtactggctgcacaccagccaggtgcggacc
cggcgggcggcgggcggtcccgccggccatgtctcctcaccaaccgggtctgtctggggt
cttagaaaatccaccgcgccctcaacacggagccgccacaggggtcgaaggaggagacgg
cagaggcggagcccagcggccccgaggtggagcagcagcagcaggacccgccggcggctc
cggagggctggaaacgggcgcgccgggccgtggacaaggagcgccgcgtgcgcttcctgc
tggagcccgccgtggttgcggcgcccgacgcggacaccgaggcggaggcggaggcggggg
cgggggctgcgccgccagagggccccggctggctgtgctccaatggccgcgcgtcagccg
cgaagcccacgggccccccccagcccggggagctgcaggagctggagcgctgcatcgaga
gcgcgcgggagcggctccgccaggccctggtgcggcgcggcgagctgctggcacagctcg
gggacagcgcgcgccaccggcctctgcgcctgcttcaggccagggctgcccccgcggagg
cgccaccgcacccggactgatggggttgccgggaaggaggcggccgccgggctcccgggg
atcaagacacacagcgcgctgggccgctgtcgacagacagtttattctatatacaaaccc
aattttgtacaccgcaattaa
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