| Entry |
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| Symbol |
SCAF4
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| Name |
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
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| KO |
| K13167 | SR-related and CTD-associated factor 4 |
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| Organism |
cjc Callithrix jacchus (white-tufted-ear marmoset)
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| Brite |
KEGG Orthology (KO) [BR:cjc00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cjc03021]
100392289 (SCAF4)
03041 Spliceosome [BR:cjc03041]
100392289 (SCAF4)
Transcription machinery [BR:cjc03021]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100392289 (SCAF4)
Spliceosome [BR:cjc03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
100392289 (SCAF4)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
21:complement(36061865..36124026)
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| AA seq |
1149 aa
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPQQATPNSVPTVPQL
PSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQ
PSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVTTTAPAAAVPPAPSA
TVPAAAAPTAASPPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPP
NGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQPSFQAQNEPLTQKPHQQEMEVEQPCI
QEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQER
RDREKERERRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIP
PRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTY
IPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPKP
LPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPP
PPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSI
GNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIG
LQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPLPPHMMHRGPPPGPAGFAMPP
PHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQQQQPQPQPQPPQQPQ
QQQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGN
RNDDRDNSNRDRREWGRRSPDRDRHRDLEDRNRRSSGHRDRERDSRDRESRREKEETRGK
EKPEVTDRSGGNKTIEPPISQVGSVDTASELEKGESEAAVLKPSEELPAEATSSVEPEKD
SGSAAEAPR |
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| NT seq |
3450 nt +upstreamnt +downstreamnt
atggacgccgtcaacgccttcaaccaggagctcttttcgcttatggatatgaaacctccc
atctctagagccaagatgattctcatcactaaagctgctattaaagctattaagctttat
aagcatgtagttcaaatagtagaaaagttcatcaaaaagtgtaaaccagaatacaaggtt
cctggattatatgtaattgactcaattgttcgacagtctcgtcatcagtttggaactgat
aaagatgtttttgggccaagattctctaaaaacataactgccacattccaatatttatat
ctttgtccatctgaagataagagtaaaatagttcgtgtgctgaacctttggcaaaaaaat
ggagtgttcaaaattgaaatcattcaacctcttttggacatggcagcaggaaccagtaat
gcggccccagtagcagaaaatgttaccaataatgaaggatcacctccacctccagtaaaa
gtttcttctgaaccaccccaacaagccactccaaactctgtcccaactgtaccacagttg
cccagctctgatgcttttgctgctgtggctcagctgtttcagacaactcaaggccaacag
cttcagcagatccttcagacttttcaacagcctccaaaaccacagtctcctgcccttgac
aatgctgtgatggctcaggttcaggctatcacagctcagttaaagacaactcctacacaa
ccatctgaacaaaaagctgctttccccccacctgaacagaaaactgcatttgacaagaag
ttgcttgatagatttgactatgatgatgagccagaagctgtggaagaatcaaagaaagag
gataccactgccgtcaccacgacagcacctgctgctgctgtgccccctgctcctagcgcc
accgtgcctgctgctgctgcacccactgctgcctctccgcctccacaggcaccatttggc
tttcctggagatggcatgcagcagccagcatatacacagcatcaaaatatggatcagttt
cagccacgaatgatgggaatacaacaggatccaatgcaccatcaggttccacttcctcct
aatggacaaatgccaggatttggacttcttcccacacctccatttcctcccatggcccag
cctgtgattcctccaactccaccagtgcagcagcctttccaaccttcttttcaggcacag
aatgaaccacttacacagaagccacatcagcaggaaatggaagtagaacaaccttgtatt
caagaggttaagcgacatatgtctgataacagaaagtcaagatctaggtcagcatccagg
tcaccaaaaaggaggcgatctagatctggttctagatctcgaaggtctcgtcatcgacgt
tctcggtctcggtccagggatagacgccgacattctccccgatctcgatcccaagaaaga
cgggatcgagaaaaagagagagaacgtcgacaaaaaggcctccctcaagtcaaaccagaa
actgcaagtgtttgcagtactacactctgggtggggcaactggacaaaagaactactcag
caggatgttgccagtctcttggaagagtttggtccaattgaatcaattaatatgattcct
cccaggggttgtgcctatattgttatggttcataggcaggatgcctatcgtgccctgcag
aagctgagccgaggaaactataaagtgaaccagaaatccataaagattgcctgggcctta
aacaaaggaataaaggcagattataagcagtattgggatgtcgaacttggtgttacttat
attccatgggacaaagtcaagcctgaggaactggagagtttttgtgaaggaggaatgttg
gacagtgacacacttaacccagattggaaaggaattcctaagaagcctgaaaatgaagtt
gctcaaaatggaggtgctgaaacctcacacacagaaccagtatcacccatacctaaacca
ttacccgtgcctgtccctcctattcctgttcctgcacctataacagtgccacctccacag
gtcccaccacatcaaccaggtccacctgtagttggtgctctccagccacctgctttcaca
cctcctctgggaattccacctccaggctttggtcctggtgttcctcctccccctcctcct
ccaccatttttgcgcccaggattcaacccaatgcatttaccaccaggttttcttcctcct
ggacccccacctcctataactccaccggtatccattcctcctcctcacactccaccaata
agcatcccaaactctactatcgctggtataaatgaagacactacaaaagacttatctatt
ggaaatcccattccaacagtggtgtctggggctagaggaaacgccgagtctggtgacagt
gtgaaaatgtatggctctgccgtgccacctgctgcacccacgaatctgcccacccctcct
gtaacccagcctgtttcacttcttggcactcaaggagttgcccctggtcctgtaattgga
ctccaggcaccatctactggtcttcttggcgcccggcccggtctcatcccgctccagcgc
cctccgggaatgcccccacctcacttacagcggttccctctgatgccgccccgtcccctg
ccgccgcacatgatgcacagaggcccaccgccaggaccagcgggctttgcgatgcctccg
cctcacggaatgaaaggtcccttcccaccgcatggcccctttgttaggcctggtggaatg
ccagggctcgggggcccagggccaggcccagggggccctgaagacagagacggaaggcaa
cagccgccgcagcagcaacagcagccacagccgcagccgcagccgccccagcaaccgcag
caacagcagcagcagcagcagcagccgccaccatcacaacagcctccaccaacacagcag
cagccgcagcagtttagaaatgataacaggcagcaattcaattcaggtagagaccaagaa
aggtttggaagaagatctttcggaaatcgggtggaaaatgaccgggaacggtatgggaac
cgtaatgatgatagagataatagtaaccgtgacaggagagagtggggaaggaggagccct
gaccgggacaggcacagagacttggaagacagaaatagacgctctagtgggcatcgagac
agagagagagattctagagatagagagtctcgtagagagaaggaagagacccgaggaaag
gaaaagcctgaggtgacagacaggtcaggtggtaacaaaaccattgaacctcccattagc
caagtgggaagtgtagacactgcttcagaacttgagaagggggagtctgaggccgcagtc
ctaaagccttctgaagagttacctgctgaggctacctcatccgttgaacccgaaaaggat
tctggctcagcagcagaggctcctcgttag |
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