Callithrix jacchus (white-tufted-ear marmoset): 100392632
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Entry
100392632 CDS
T03264
Symbol
SMURF1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04120
Ubiquitin mediated proteolysis
cjc04137
Mitophagy - animal
cjc04144
Endocytosis
cjc04340
Hedgehog signaling pathway
cjc04350
TGF-beta signaling pathway
cjc04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100392632 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100392632 (SMURF1)
04350 TGF-beta signaling pathway
100392632 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100392632 (SMURF1)
04137 Mitophagy - animal
100392632 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
100392632 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100392632 (SMURF1)
04121 Ubiquitin system [BR:
cjc04121
]
100392632 (SMURF1)
03029 Mitochondrial biogenesis [BR:
cjc03029
]
100392632 (SMURF1)
Enzymes [BR:
cjc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
100392632 (SMURF1)
Membrane trafficking [BR:
cjc04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
100392632 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
100392632 (SMURF1)
Ubiquitin system [BR:
cjc04121
]
Ubiquitin ligases (E3)
HECT type E3
100392632 (SMURF1)
Mitochondrial biogenesis [BR:
cjc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100392632 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
100392632
NCBI-ProteinID:
XP_002806631
Ensembl:
ENSCJAG00000015970
UniProt:
F7HL79
LinkDB
All DBs
Position
2:12513882..12635688
Genome browser
AA seq
757 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPSDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGTVYEDSGPGRPLSCFMEEPA
PYTDSTGAAAGGGNCRFVESPSQDQRLQAQRLRNPDVRGSLQTPQNRPHGHQSPELPEGY
EQRTTVQGQVYFLHTQTGVSTWHDPRIPSPLGTIPGGDEAFLYEFLLQGHTSEPRDLNSV
NCDELGPLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPRLHHIMNHQCQLKEPSQPLPLPS
EGSVEDEELPAQRYERDLVQKLKVLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMR
PKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSS
INPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLV
WILENDITPVLDHTFCVEHNAFGRILQHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGI
EAQFLALQKGFNELIPQHLLKPFDQKELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVR
WFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLP
KAHTCFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccccgggacgcgcaggaacggctccagcatcaagatccgtctgacagtatta
tgtgccaagaaccttgcaaagaaagacttcttcaggctccctgacccgtttgcaaagatt
gtcgtggatgggtctgggcagtgccactcaaccgacactgtgaaaaacacattggaccca
aagtggaaccagcactatgatctatatgttgggaaaacagattcaataaccattagtgtg
tggaaccacaagaagattcacaagaaacagggagctggcttcctgggctgcgtgcggctg
ctctccaacgccatcagcagattaaaagacaccggataccagcgtttggatctatgcaaa
ctaaacccctcagatacggatgcagttcgtggccagatagtggtcagtttacagacacga
gacagaatcggcaccggcggctcagtggtggactgcagaggcctgctagaaaatgaagga
acggtgtatgaagactcggggcctgggaggccgctcagctgcttcatggaggaaccagcc
ccttacacagatagcactggtgctgccgctggaggagggaactgcaggtttgtggagtcc
ccaagtcaagatcaaagacttcaggcacagcgacttcgaaaccctgatgtgcgaggttca
ctgcagacgccccagaaccgaccacacggccaccagtccccggaactgcctgaaggctac
gaacagagaacaacagtccagggccaggtttactttttgcacacacagactggagttagc
acgtggcacgaccccaggataccaagtcccttggggaccattcctgggggagatgaagct
tttctatacgaattccttctacaaggccatacatctgagcccagagaccttaacagtgtg
aattgtgatgaacttggaccactgccgccaggctgggaagtcagaagtacagtttctggg
aggatatattttgtagatcataataaccgaacaacccagtttacagacccaaggttacac
cacatcatgaatcaccagtgccaactcaaggagcccagccagccgctgccactgcccagc
gagggctctgtggaggatgaggagcttcctgcccagagatacgaaagagatctagtccag
aagctgaaggtcctcagacacgaactgtcccttcagcagccccaggctggtcattgccga
atcgaagtgtccagagaagaaatcttcgaggagtcttaccgccagataatgaagatgaga
ccgaaagatttgaaaaaacggctcatggtgaaattccgtggggaagaaggtttggattac
ggtggagtggcgagggaatggctttatttgttgtgccatgaaatgctgaatccatattat
gggctcttccagtattccacagacaatatttacatgttgcaaataaatccagattcttca
atcaaccccgaccacttgtcttacttccactttgtggggcggatcatggggctggccgtg
tttcatgggcactacatcaatgggggcttcacagtgcccttctataagcagctcctggga
aagcccatccagctctcggatctggaatccgtggacccggagctgcataagagcctggtg
tggatcctagagaatgacatcacaccggtgctggaccacaccttctgcgtggaacacaat
gccttcgggcggattcttcagcatgaactgaaacctaatggcagaaacgtgcctgtcaca
gaggagaacaagaaagaatatgtcaggttgtatgtaaactggaggtttatgagaggaatt
gaagcccagttcttagctctgcagaaggggttcaatgaactcatccctcaacacttgctg
aagccttttgaccagaaggaactggagctgatcataggcggcctggataaaatagacctg
aacgactggaagtcgaacacgcggctaaagcactgtgtggctgacagcaacatcgtccgg
tggttctggcaagcggtggagacgtttgatgaagaaaggagggccaggctgttgcagttt
gtgactgggtccacgcgagtcccgctccaaggcttcaaggctttgcaaggttctacaggc
gcggcagggccccggctgttcaccatccacctgatagatgcaaacacagacaaccttccg
aaggcccatacctgctttaaccggatcgacattccaccatatgagtcctatgagaagctc
tacgagaagctgctgacagccgtggaggagacctgcgggtttgctgtggagtga
DBGET
integrated database retrieval system
